BLASTX nr result

ID: Cnidium21_contig00036222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036222
         (822 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140831.1| PREDICTED: F-box/kelch-repeat protein At3g06...    77   6e-12
ref|XP_004140236.1| PREDICTED: F-box protein CPR30-like [Cucumis...    72   1e-10
emb|CBI40164.3| unnamed protein product [Vitis vinifera]               72   2e-10
ref|XP_004140235.1| PREDICTED: F-box protein CPR30-like [Cucumis...    70   7e-10
ref|XP_002527480.1| conserved hypothetical protein [Ricinus comm...    59   2e-09

>ref|XP_004140831.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Cucumis
           sativus] gi|449485606|ref|XP_004157222.1| PREDICTED:
           F-box/kelch-repeat protein At3g06240-like [Cucumis
           sativus]
          Length = 372

 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 66/219 (30%), Positives = 106/219 (48%), Gaps = 14/219 (6%)
 Frame = +1

Query: 1   VLLVPNNIMRHKYC-SVVSADTGDLLEKYKIPFKTKNG-SLQLCESFNGILCLNAIETEP 174
           +L++ ++    K C S+V+A+T +   + +IP K   G  L +C S+NG++C+++     
Sbjct: 63  LLIINSSPTDQKACFSLVNAETFNETFRSEIPMKANLGYKLSVCGSYNGLVCISSASL-- 120

Query: 175 NVDVEYQDLYLWNPCVGKYRTLFSSCFKKRGVC--CYALGMGVNEPTFDTRIVRIVYPAD 348
              ++   +Y+WNP V K R L SS   K   C     L  G ++ T D  ++RIV    
Sbjct: 121 ---LDVDPIYIWNPSVRKTRLLPSSLIPKWDHCWPLNYLAFGFHQATNDHIVLRIV--RI 175

Query: 349 ERGYALGKVPPKAEVYSLKRNSWRRIKD-PGVPL---LGYHSGVTVGNNMTYWLNTRMSR 516
           E+     +V    E+YSLK + WRR+   P +P        S     N + YW+    + 
Sbjct: 176 EQWSCCYQV----EIYSLKADCWRRVSSVPTIPTALDCRLLSKSICSNGLIYWIVKHKNG 231

Query: 517 DVNEEGWLLSFDFNNEVFGKIKLPDNVRY------CLGV 615
            +     +LSFD   E F ++ LPD + Y      CLGV
Sbjct: 232 GIPNS--ILSFDIATEEFHRLMLPDCLVYIDTPPLCLGV 268


>ref|XP_004140236.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449531147|ref|XP_004172549.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 379

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 58/191 (30%), Positives = 84/191 (43%), Gaps = 5/191 (2%)
 Frame = +1

Query: 34  KYCSVVSADTGDLLEKYKIPFKTKNGSLQLCESFNGILCLNAIETEPNVDVEYQDLYLWN 213
           +Y      DT DL ++ K PF   NG L++    NG++C   +           DL LWN
Sbjct: 72  RYSLHFDTDTLDLYQELKFPFPNSNGDLKIVGVSNGLVCFLGL-----------DLLLWN 120

Query: 214 PCVGKYRTL--FSSCFKKRGV-CCYALGMGVNEPTFDTRIVRIVYPADERGYALGKVPPK 384
           P + +   +   S      GV   YALG G +    D ++VR++Y AD+  ++  K  PK
Sbjct: 121 PSIQRVVDVPRTSDTVTTYGVPDFYALGFGFDSCADDHKVVRLLYFADKVPFSY-KRSPK 179

Query: 385 AEVYSLKRNSWRRIKDPGVPLLGYHSGVTVG--NNMTYWLNTRMSRDVNEEGWLLSFDFN 558
            E+Y +   SWR I +         SG T    N   +W+  R         ++L FD  
Sbjct: 180 VELYEVGTGSWRAINNKAPRCEIVRSGWTQAFVNGAVHWIAYR-EIGTGYRCFILRFDIV 238

Query: 559 NEVFGKIKLPD 591
            E F  I LPD
Sbjct: 239 KECFSIITLPD 249


>emb|CBI40164.3| unnamed protein product [Vitis vinifera]
          Length = 423

 Score = 71.6 bits (174), Expect = 2e-10
 Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 11/184 (5%)
 Frame = +1

Query: 73  LEKYKIPFKTKNGSLQLCESFNGILCLNAIETEPNVDVEYQ--DLYLWNPCVGKYRTL-- 240
           + + ++P  +K    Q+  S NG++CL    TE N    Y   +L+LWNP + +++TL  
Sbjct: 96  VRRLEVPVPSKTDYYQIVGSSNGLICL----TESNFKGSYLSLNLFLWNPAIREFQTLPK 151

Query: 241 -----FSSCFKKRGVCCYALGMGVNEPTFDTRIVRIVYPADERGYALGKVPPKAEVYSLK 405
                F+S     G     LG   +    D ++VRIVY        +     +A+VYSL+
Sbjct: 152 YHINNFTSPLMVVG-----LGFAFHPVINDYKVVRIVY-------FMRNKTSEADVYSLR 199

Query: 406 RNSWRRIKDPGVPLLGYHSGV--TVGNNMTYWLNTRMSRDVNEEGWLLSFDFNNEVFGKI 579
             SWR++ D  +     HS V  T  N   +WL  + +   N +  +LSFD   +VF +I
Sbjct: 200 TGSWRKV-DANICCY-IHSNVSRTFINGALHWLAGKKNEMDNTDNLILSFDMAKDVFKEI 257

Query: 580 KLPD 591
            LPD
Sbjct: 258 MLPD 261


>ref|XP_004140235.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
           gi|449511918|ref|XP_004164088.1| PREDICTED: F-box
           protein CPR30-like [Cucumis sativus]
          Length = 391

 Score = 69.7 bits (169), Expect = 7e-10
 Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 14/200 (7%)
 Frame = +1

Query: 34  KYCSVVSADTGDLLEKYKIPFKTKNGSLQLCESFNGILCLNAIETEPNVDVEYQDLYLWN 213
           +Y     +DT  + ++ K+P    N S +L  S NG+LCL             Q+++ WN
Sbjct: 76  RYSLHFDSDTLGIYKELKLPHVNWNQSFKLVGSSNGLLCLLG-----------QNIFFWN 124

Query: 214 PCVGKYR---------TLFSSCFKKRGVCCYALGMGVNEPTFDTRIVRIVYPADERGYAL 366
           P + ++          T++ S +K      YALG G +    D ++VR+VY         
Sbjct: 125 PSIQRFLALPWPSDIFTVYGSPYK------YALGFGFDSRANDFKLVRLVYIEGGPPVYD 178

Query: 367 GKVPPKAEVYSLKRNSWRRIKD--PGVPLLGYHSGVTVGNNMTYWLNTRMSRDVNEEGW- 537
            ++PP+ E+Y L   SWR+I D  P   +L         N   +W+    SR     G+ 
Sbjct: 179 YELPPRVELYQLSTGSWRQITDSAPCYEILKSQWTQIFMNEAVHWIAFIRSR----RGFR 234

Query: 538 --LLSFDFNNEVFGKIKLPD 591
             +L F  + E F  I LPD
Sbjct: 235 CVILRFHMDGEYFSTIPLPD 254


>ref|XP_002527480.1| conserved hypothetical protein [Ricinus communis]
           gi|223533120|gb|EEF34878.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 379

 Score = 58.9 bits (141), Expect(2) = 2e-09
 Identities = 46/185 (24%), Positives = 82/185 (44%), Gaps = 5/185 (2%)
 Frame = +1

Query: 58  DTGDLLEKYK---IPFKTKNGSLQLCESFNGILCLNAIETEPNVDVEYQDLYLWNPCVGK 228
           D  D+  +Y+    P ++     ++  S NGI+CL       N     + + LWNP +G 
Sbjct: 77  DDDDMFSEYQELDFPLESSWDYFEIVGSCNGIICLT-----DNHSHILKRIVLWNPSIGL 131

Query: 229 YRTLFSSCFKKRGVCCYALGMGVNEPTFDTRIVRIVYPADERGYALGKVPPKAEVYSLKR 408
             TL       + V    LG G +  T D +++RIVY +      +  VPP+ E++ L R
Sbjct: 132 SVTLPLQRISYK-VSNVVLGFGFDSRTNDYKVIRIVYYSTNDDSLM--VPPEVEIFELSR 188

Query: 409 NSWRRIKDPGVPL--LGYHSGVTVGNNMTYWLNTRMSRDVNEEGWLLSFDFNNEVFGKIK 582
            +WR      VP   +  +S   V     +W+     R++     +  +  ++E F + +
Sbjct: 189 GTWRINNSASVPAYDVSKYSSQIVLEGAIHWVGYYSPRELT----IAVYVVHDEEFKEFR 244

Query: 583 LPDNV 597
           +PD +
Sbjct: 245 MPDEI 249



 Score = 29.3 bits (64), Expect(2) = 2e-09
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = +2

Query: 665 VLNEVKESNGTCSQPCCIWLMSHEDGEVSWNLRFKIAL 778
           ++   K  +  C + CCIW+M+      SW   F + +
Sbjct: 268 IIQYKKRGSRLCYESCCIWVMNEYGVHDSWTKLFNVVV 305


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