BLASTX nr result

ID: Cnidium21_contig00036187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036187
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-11
ref|XP_003622298.1| hypothetical protein MTR_7g032690 [Medicago ...    63   3e-08
gb|ABN05900.1| Ubiquitin [Medicago truncatula]                         63   3e-08
ref|XP_003622297.1| hypothetical protein MTR_7g032690 [Medicago ...    62   4e-08
emb|CAE03561.2| OSJNBa0085I10.6 [Oryza sativa Japonica Group] gi...    50   6e-08

>ref|XP_002328708.1| predicted protein [Populus trichocarpa] gi|222839006|gb|EEE77357.1|
           predicted protein [Populus trichocarpa]
          Length = 327

 Score = 60.5 bits (145), Expect(2) = 2e-11
 Identities = 26/78 (33%), Positives = 46/78 (58%)
 Frame = -3

Query: 331 KRMLKYTLERFDIAPEGEKWVYKTLNSSWRSHKSRVKQIHY*ELDNDEERIQNRPDHIPL 152
           + M ++   +FDI P  + WV ++L S WR+ K+++K  HY     DEER+ +R   +  
Sbjct: 58  ENMWQFVQTKFDIEPVCKTWVLRSLASKWRNWKAKLKSEHYYPHKTDEERLNDRDRRVLP 117

Query: 151 EDFKLLLKYWSDDAVKLR 98
           E + +L+ YW+ +  +LR
Sbjct: 118 EQWAILISYWNSEEAQLR 135



 Score = 33.1 bits (74), Expect(2) = 2e-11
 Identities = 15/29 (51%), Positives = 19/29 (65%)
 Frame = -2

Query: 95  NKARRNNYIETHTLGSKSMAELRTDLKEK 9
           NKA R+N   THT GSKS A +R + + K
Sbjct: 139 NKANRSNQKSTHTAGSKSFARIREEERTK 167


>ref|XP_003622298.1| hypothetical protein MTR_7g032690 [Medicago truncatula]
           gi|355497313|gb|AES78516.1| hypothetical protein
           MTR_7g032690 [Medicago truncatula]
          Length = 416

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/76 (38%), Positives = 48/76 (63%)
 Frame = -3

Query: 331 KRMLKYTLERFDIAPEGEKWVYKTLNSSWRSHKSRVKQIHY*ELDNDEERIQNRPDHIPL 152
           K +  Y  +R+ +  +G+K VY  +N +WR +K  +K+ H+ +  N  ER++NRPD IP 
Sbjct: 20  KTIWAYVNKRYIVLEKGQKDVYAIINDAWRWYKWLIKKNHFTKYRNLCERLKNRPDSIPE 79

Query: 151 EDFKLLLKYWSDDAVK 104
             FK L+ YWS +A++
Sbjct: 80  AHFKKLMTYWSYEAIR 95


>gb|ABN05900.1| Ubiquitin [Medicago truncatula]
          Length = 674

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/76 (38%), Positives = 48/76 (63%)
 Frame = -3

Query: 331 KRMLKYTLERFDIAPEGEKWVYKTLNSSWRSHKSRVKQIHY*ELDNDEERIQNRPDHIPL 152
           K +  Y  +R+ +  +G+K VY  +N +WR +K  +K+ H+ +  N  ER++NRPD IP 
Sbjct: 278 KTIWAYVNKRYIVLEKGQKDVYAIINDAWRWYKWLIKKNHFTKYRNLCERLKNRPDSIPE 337

Query: 151 EDFKLLLKYWSDDAVK 104
             FK L+ YWS +A++
Sbjct: 338 AHFKKLMTYWSYEAIR 353


>ref|XP_003622297.1| hypothetical protein MTR_7g032690 [Medicago truncatula]
           gi|355497312|gb|AES78515.1| hypothetical protein
           MTR_7g032690 [Medicago truncatula]
          Length = 697

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/70 (40%), Positives = 47/70 (67%)
 Frame = -3

Query: 313 TLERFDIAPEGEKWVYKTLNSSWRSHKSRVKQIHY*ELDNDEERIQNRPDHIPLEDFKLL 134
           +L+R+ +  +G+K VY  +N +WR +K  +K+ H+ +  N  ER++NRPD IP   FK L
Sbjct: 307 SLKRYIVLEKGQKDVYAIINDAWRWYKWLIKKNHFTKYRNLCERLKNRPDSIPEAHFKKL 366

Query: 133 LKYWSDDAVK 104
           + YWS +A++
Sbjct: 367 MTYWSYEAIR 376


>emb|CAE03561.2| OSJNBa0085I10.6 [Oryza sativa Japonica Group]
           gi|90265080|emb|CAH67753.1| H0702G05.12 [Oryza sativa
           Indica Group] gi|116309963|emb|CAH66992.1|
           OSIGBa0152L12.1 [Oryza sativa Indica Group]
           gi|218195543|gb|EEC77970.1| hypothetical protein
           OsI_17339 [Oryza sativa Indica Group]
           gi|222629524|gb|EEE61656.1| hypothetical protein
           OsJ_16109 [Oryza sativa Japonica Group]
          Length = 969

 Score = 50.4 bits (119), Expect(2) = 6e-08
 Identities = 22/67 (32%), Positives = 37/67 (55%)
 Frame = -3

Query: 304 RFDIAPEGEKWVYKTLNSSWRSHKSRVKQIHY*ELDNDEERIQNRPDHIPLEDFKLLLKY 125
           +FDIAP  E W+ K +   W+S K+ +KQ HY   +  EE + ++   +  E ++ L+ Y
Sbjct: 692 KFDIAPAAEFWIMKCIGRKWKSWKALLKQKHYDTHETVEECLADQNPRVLKEQWQYLVAY 751

Query: 124 WSDDAVK 104
           W  +  K
Sbjct: 752 WGTEKAK 758



 Score = 31.2 bits (69), Expect(2) = 6e-08
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -2

Query: 95  NKARRNNYIETHTLGSKSMAELRTDLKEKDP 3
           NKA R N   THT G+KS A +  + K+K P
Sbjct: 764 NKACRANVTATHTAGTKSFARIIEEEKQKRP 794


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