BLASTX nr result

ID: Cnidium21_contig00036178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036178
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   105   3e-21
ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21
ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20
ref|NP_192993.2| F-box protein CPR30 [Arabidopsis thaliana] gi|1...    95   7e-18
ref|XP_002532715.1| conserved hypothetical protein [Ricinus comm...    95   7e-18

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score =  105 bits (263), Expect = 3e-21
 Identities = 56/141 (39%), Positives = 80/141 (56%), Gaps = 3/141 (2%)
 Frame = +3

Query: 6   DLGLEQFKEFPFPTANVGNFSVPTG---GSFCIFDNCMNSCLDVWMINNYGAENPWYKAF 176
           DLG+E ++E   P     NF +  G   G  C   N +   +DVWM+  YG +  W K F
Sbjct: 234 DLGVEDYREVLQPEYKDKNFYIDLGVLRGCLCFLANFLGERVDVWMMKEYGVKESWTKLF 293

Query: 177 SVEQHGALGSFQYFRPVAFSKSGKDVLLEVDSTRLVWYDPERKVVKNVRIHGIPSKFGIQ 356
           SV Q+  +G  +  +P+A+SKSG +VL+E D+  L WYD +RK VKN RI GIP  F   
Sbjct: 294 SVAQYEVIGFLRSLKPLAYSKSGDEVLIEHDNLDLCWYDLKRKQVKN-RIPGIPYSFEAD 352

Query: 357 LYRESLLQLTENEQLQKPSED 419
            + ESL+ ++ N  L   ++D
Sbjct: 353 TFVESLISVSPNRHLDGRTQD 373


>ref|XP_002308788.1| predicted protein [Populus trichocarpa] gi|222854764|gb|EEE92311.1|
           predicted protein [Populus trichocarpa]
          Length = 400

 Score =  105 bits (261), Expect = 5e-21
 Identities = 54/138 (39%), Positives = 83/138 (60%), Gaps = 5/138 (3%)
 Frame = +3

Query: 3   FDLGLEQFKEFPFPT-ANVG-NFSVPTG---GSFCIFDNCMNSCLDVWMINNYGAENPWY 167
           FD+  ++F E P P   N G NF V  G   G+ C+  N  + C+DVW++  YG +  W 
Sbjct: 240 FDIRDDKFFELPQPDYENKGMNFHVDVGVLEGNLCVMCNYEHVCVDVWVMKEYGVKESWC 299

Query: 168 KAFSVEQHGALGSFQYFRPVAFSKSGKDVLLEVDSTRLVWYDPERKVVKNVRIHGIPSKF 347
           K FSV     + +F + RP+ +SK G  VLLEV+  +L+WYD + K  K VR+ G PS F
Sbjct: 300 KMFSVHAIKWISAFMFLRPLVYSKGGDMVLLEVNGEKLLWYDWKNKHAKVVRVRGGPSSF 359

Query: 348 GIQLYRESLLQLTENEQL 401
           G ++Y ESL+++ + +++
Sbjct: 360 GSEMYVESLIRINDGDRI 377


>ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|222867152|gb|EEF04283.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score =  101 bits (251), Expect = 7e-20
 Identities = 51/137 (37%), Positives = 82/137 (59%), Gaps = 5/137 (3%)
 Frame = +3

Query: 3   FDLGLEQFKEFPFPT--ANVGNFSVPTG---GSFCIFDNCMNSCLDVWMINNYGAENPWY 167
           FD+  ++F E P P   +   +F V  G   G+ C+  N    C+DVW++  YG +  W 
Sbjct: 248 FDIRNDKFFELPQPNYESKGMSFQVDVGVLEGNLCVMCNYEYVCVDVWVMREYGMKESWC 307

Query: 168 KAFSVEQHGALGSFQYFRPVAFSKSGKDVLLEVDSTRLVWYDPERKVVKNVRIHGIPSKF 347
           K FSV+    +G+F + RP+ +SK G  VLLEV+  +LVWYD + K  K V+I G P+ +
Sbjct: 308 KMFSVQGIKWIGAFMFLRPLIYSKDGGKVLLEVNDEKLVWYDWKNKHAKVVKIRGGPNSY 367

Query: 348 GIQLYRESLLQLTENEQ 398
           G ++Y ESL+++ + ++
Sbjct: 368 GSEMYVESLVRINDGDR 384


>ref|NP_192993.2| F-box protein CPR30 [Arabidopsis thaliana]
           gi|145333023|ref|NP_001078377.1| F-box protein CPR30
           [Arabidopsis thaliana]
           gi|142989747|sp|Q9SU30.2|CPR30_ARATH RecName: Full=F-box
           protein CPR30; AltName: Full=Protein CONSTITUTIVE
           EXPRESSER OF PR GENES 30 gi|332657747|gb|AEE83147.1|
           F-box protein CPR30 [Arabidopsis thaliana]
           gi|332657748|gb|AEE83148.1| F-box protein CPR30
           [Arabidopsis thaliana]
          Length = 413

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 50/131 (38%), Positives = 74/131 (56%), Gaps = 6/131 (4%)
 Frame = +3

Query: 3   FDLGLEQFKEFPFPTANV-GNFSVPTG-----GSFCIFDNCMNSCLDVWMINNYGAENPW 164
           FDL LE+F+   FP A   GN  +        G  C+  N   S +DVWM+  Y   + W
Sbjct: 238 FDLALEEFEIVRFPEAVANGNVDIQMDIGVLDGCLCLMCNYDQSYVDVWMMKEYNVRDSW 297

Query: 165 YKAFSVEQHGALGSFQYFRPVAFSKSGKDVLLEVDSTRLVWYDPERKVVKNVRIHGIPSK 344
            K F+V++  ++ SF Y RP+ +SK  K VLLE+++T+LVW+D E K +  +RI   PS 
Sbjct: 298 TKVFTVQKPKSVKSFSYMRPLVYSKDKKKVLLELNNTKLVWFDLESKKMSTLRIKDCPSS 357

Query: 345 FGIQLYRESLL 377
           +  +L   SL+
Sbjct: 358 YSAELVVSSLV 368


>ref|XP_002532715.1| conserved hypothetical protein [Ricinus communis]
           gi|223527542|gb|EEF29664.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 395

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 8/148 (5%)
 Frame = +3

Query: 3   FDLGLEQFKEFPFP--TANVGNFSVPTG---GSFCIFDNCMNSCLDVWMINNYGAENPWY 167
           FD+  E F++ P P  + N  NF V  G   G  C   NC + C+D+W++  YG +  W 
Sbjct: 242 FDIVNETFQQVPQPNWSDNQLNFQVDAGVLEGRLCAMCNCGHECIDLWVMEEYGVKESWI 301

Query: 168 KAFSVEQHGALGSFQYFRPVAFSKSGKDVLLEVDSTRLVWYDPERKVVKNVRIHGIPSKF 347
           K FS     ++ +  + RP+ +SK  + +LLEV+  +LVWYD  +  V+ V++ G P  F
Sbjct: 302 KLFSFRLSKSMSNLMFLRPLCYSKDREKMLLEVNDHKLVWYDWNKTSVRTVKVKGGPRSF 361

Query: 348 GIQLYRESLLQLT---ENEQLQKPSEDK 422
           G  +   SL+ L    ENEQ  K  + K
Sbjct: 362 GAAMCVGSLVPLDDGGENEQKLKKEKRK 389


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