BLASTX nr result

ID: Cnidium21_contig00036135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036135
         (563 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|2...   151   8e-35
ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   141   6e-32
ref|XP_002515265.1| pentatricopeptide repeat-containing protein,...   139   3e-31
ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containi...   137   1e-30
ref|XP_002301516.1| predicted protein [Populus trichocarpa] gi|2...   131   6e-29

>ref|XP_002320971.1| predicted protein [Populus trichocarpa] gi|222861744|gb|EEE99286.1|
           predicted protein [Populus trichocarpa]
          Length = 473

 Score =  151 bits (381), Expect = 8e-35
 Identities = 76/164 (46%), Positives = 107/164 (65%)
 Frame = +1

Query: 1   FEEWESTCLTYDKRLPYHAIGFYLKHDMSKEAEEVFHNVLKRYNGNAHWFWKRIMPYYME 180
           F+EWES+C +YD RL   AI   L+HDM +EA  +F + LKR  G      +  M ++++
Sbjct: 309 FKEWESSCHSYDMRLANVAIRACLEHDMYEEAALIFDDALKRTEGLFFNAREMFMVFFLK 368

Query: 181 KRQLDFALRCLETAITVVKNNELHPTPEDVNRFMKYLKKASDVNNAEKFCKILKKVNLLD 360
             QLD AL+ ++ A + VK  E  P P+ V+ F  Y +   DVN AE+ CKILK +N LD
Sbjct: 369 NHQLDLALKHMKAAFSEVKEIEWQPEPKTVSAFFAYFEDEKDVNGAERLCKILKHINRLD 428

Query: 361 CKAYELLLETYVAASKEAPDMRNRIMDDEIKVSPELQELLRRVC 492
             AY+LLL+TY+AA K AP+MR R+ +D I+++PEL+ LL RVC
Sbjct: 429 SNAYDLLLKTYIAAGKLAPEMRQRLEEDGIEINPELENLLERVC 472


>ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02370, mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  141 bits (356), Expect = 6e-32
 Identities = 71/163 (43%), Positives = 109/163 (66%)
 Frame = +1

Query: 1   FEEWESTCLTYDKRLPYHAIGFYLKHDMSKEAEEVFHNVLKRYNGNAHWFWKRIMPYYME 180
           FEEW+S+C ++D RL   A+  +L  DM K+AE + +  +KR +G  +      M ++++
Sbjct: 343 FEEWKSSCFSFDVRLANVAVRAFLGWDMIKDAESILYEAVKRSSGPFYTALDMFMAHHLK 402

Query: 181 KRQLDFALRCLETAITVVKNNELHPTPEDVNRFMKYLKKASDVNNAEKFCKILKKVNLLD 360
            R++D AL+ +E A + VKNNE  P PE V  F+KY ++  DV  AEKFCKILK ++ LD
Sbjct: 403 VREIDTALKYMEAAASEVKNNEWQPAPERVLAFLKYFEEEKDVEGAEKFCKILKNISGLD 462

Query: 361 CKAYELLLETYVAASKEAPDMRNRIMDDEIKVSPELQELLRRV 489
             AY+LLL+T VAA +  P+MR R+ +D+I+V  + ++LL+RV
Sbjct: 463 SNAYQLLLQTXVAAGRTEPEMRKRMKEDDIEV--DSKDLLQRV 503


>ref|XP_002515265.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545745|gb|EEF47249.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score =  139 bits (350), Expect = 3e-31
 Identities = 71/164 (43%), Positives = 100/164 (60%)
 Frame = +1

Query: 1   FEEWESTCLTYDKRLPYHAIGFYLKHDMSKEAEEVFHNVLKRYNGNAHWFWKRIMPYYME 180
           F EWES C  YD R+   AI  +L+HDM +EAE +F + LKR  G      +R M ++++
Sbjct: 339 FREWESGCTNYDMRIANVAIRVFLQHDMYEEAELIFDDALKRTRGPFFKARERFMLFFLK 398

Query: 181 KRQLDFALRCLETAITVVKNNELHPTPEDVNRFMKYLKKASDVNNAEKFCKILKKVNLLD 360
             QLD AL+ +  A +  + +E  P  E VN +  Y +   DV+ AEK  KILK +N L+
Sbjct: 399 IHQLDLALKHMRAAFSESEKHEWKPLQETVNAYFDYFRTEKDVDGAEKLSKILKHINCLN 458

Query: 361 CKAYELLLETYVAASKEAPDMRNRIMDDEIKVSPELQELLRRVC 492
              Y LLL+TY+AA K AP+MR R+ +D I++S EL+ LL  VC
Sbjct: 459 SSVYSLLLKTYIAAGKLAPEMRQRLEEDNIEISDELEYLLESVC 502


>ref|XP_004146883.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
           mitochondrial-like [Cucumis sativus]
           gi|449518825|ref|XP_004166436.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g02370,
           mitochondrial-like [Cucumis sativus]
          Length = 474

 Score =  137 bits (345), Expect = 1e-30
 Identities = 68/164 (41%), Positives = 100/164 (60%)
 Frame = +1

Query: 1   FEEWESTCLTYDKRLPYHAIGFYLKHDMSKEAEEVFHNVLKRYNGNAHWFWKRIMPYYME 180
           ++EWES C  +D R+    IG YL+ DM ++A  +F +  KR  G      +  M Y+++
Sbjct: 309 YKEWESNCRNFDLRIVNDIIGAYLQQDMYEDAAMIFEDATKRSKGPFSRAREMFMVYFLK 368

Query: 181 KRQLDFALRCLETAITVVKNNELHPTPEDVNRFMKYLKKASDVNNAEKFCKILKKVNLLD 360
            +Q+D A   LE+A++  K  E HP+      F+ Y ++  DV  AE F +ILK++  LD
Sbjct: 369 LKQVDSAFSHLESALSESKEKEWHPSLATTTAFLNYFEEEKDVEGAEDFARILKRLKCLD 428

Query: 361 CKAYELLLETYVAASKEAPDMRNRIMDDEIKVSPELQELLRRVC 492
              Y LLL+TYVAA K APDMR R+ +D+I++S EL+ELL  VC
Sbjct: 429 ASGYHLLLKTYVAAGKLAPDMRKRLKEDDIEISSELEELLGTVC 472


>ref|XP_002301516.1| predicted protein [Populus trichocarpa] gi|222843242|gb|EEE80789.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  131 bits (330), Expect = 6e-29
 Identities = 67/163 (41%), Positives = 100/163 (61%)
 Frame = +1

Query: 1   FEEWESTCLTYDKRLPYHAIGFYLKHDMSKEAEEVFHNVLKRYNGNAHWFWKRIMPYYME 180
           F+EWES+C +YD  L   AI   L+HDM +EA  +F   LKR  G      +  M ++++
Sbjct: 311 FKEWESSCHSYDMGLANVAIRACLEHDMYEEAASIFDEALKRTKGLFFKAREMFMVFFLK 370

Query: 181 KRQLDFALRCLETAITVVKNNELHPTPEDVNRFMKYLKKASDVNNAEKFCKILKKVNLLD 360
             Q D AL+ ++ A +  K  E  P  + V+ F+ Y +   DV+ AE+ CKI K++N L+
Sbjct: 371 NHQPDLALKHMKAAFSEAKEIEWQPDQKTVSAFLNYFEDGKDVDGAERLCKIWKQINRLN 430

Query: 361 CKAYELLLETYVAASKEAPDMRNRIMDDEIKVSPELQELLRRV 489
             AY LLL+TY AA + AP+MR R+ +D I+++PEL+ LL RV
Sbjct: 431 SNAYILLLKTYTAAGRLAPEMRQRLEEDNIEINPELENLLERV 473


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