BLASTX nr result

ID: Cnidium21_contig00036101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036101
         (911 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513372.1| pentatricopeptide repeat-containing protein,...   177   2e-42
emb|CAN60119.1| hypothetical protein VITISV_016375 [Vitis vinifera]   176   9e-42
ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containi...   174   2e-41
ref|XP_002310672.1| predicted protein [Populus trichocarpa] gi|2...   169   6e-40
gb|AEW07919.1| Pinus taeda anonymous locus 0_14503_01 genomic se...   138   2e-30

>ref|XP_002513372.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223547280|gb|EEF48775.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 597

 Score =  177 bits (450), Expect = 2e-42
 Identities = 85/123 (69%), Positives = 98/123 (79%)
 Frame = -1

Query: 911 MVGKYKILPRAEHYSCMVDLFARGGQLEEAYDLICKMQIKPNASLWGSILGACSIYGDTT 732
           M+ KY ILPRAEHYSCM+DLFARGGQLEEAY++ICKM IKPN+SLWG+ILGACSIYG  +
Sbjct: 468 MITKYNILPRAEHYSCMIDLFARGGQLEEAYNMICKMNIKPNSSLWGAILGACSIYGHMS 527

Query: 731 LGEVAAKHLFNLEPTNSANYVVLASTYAAAGLWGNALKTRKLMEDAGLKKNSGCSYLQST 552
           LGEVAA HL  ++P NSANYVVLA  YAA+G W  A + R LME   LKK  G S +QST
Sbjct: 528 LGEVAATHLLRMDPENSANYVVLAGIYAASGSWDKACRMRNLMEYRSLKKIPGYSIIQST 587

Query: 551 RKS 543
            K+
Sbjct: 588 NKN 590


>emb|CAN60119.1| hypothetical protein VITISV_016375 [Vitis vinifera]
          Length = 711

 Score =  176 bits (445), Expect = 9e-42
 Identities = 87/129 (67%), Positives = 103/129 (79%)
 Frame = -1

Query: 911 MVGKYKILPRAEHYSCMVDLFARGGQLEEAYDLICKMQIKPNASLWGSILGACSIYGDTT 732
           MV KY I PRAEHYSCMVDLFAR G LEEAY+L+CK+ IK NASLWG+ILGA SIYG  +
Sbjct: 582 MVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMS 641

Query: 731 LGEVAAKHLFNLEPTNSANYVVLASTYAAAGLWGNALKTRKLMEDAGLKKNSGCSYLQST 552
           LG+ AA +LFN++P NS NYVVLAS Y+AAGLW +A K RKLME+   KKN+G S+ Q+T
Sbjct: 642 LGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGYSFFQAT 701

Query: 551 RKSATLLPA 525
           +KS  LL A
Sbjct: 702 KKSIPLLQA 710


>ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 1724

 Score =  174 bits (442), Expect = 2e-41
 Identities = 86/127 (67%), Positives = 102/127 (80%)
 Frame = -1

Query: 911 MVGKYKILPRAEHYSCMVDLFARGGQLEEAYDLICKMQIKPNASLWGSILGACSIYGDTT 732
           MV KY I PRAEHYSCMVDLFAR G LEEAY+L+CK+ IK NASLWG+ILGA SIYG  +
Sbjct: 461 MVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMS 520

Query: 731 LGEVAAKHLFNLEPTNSANYVVLASTYAAAGLWGNALKTRKLMEDAGLKKNSGCSYLQST 552
           LG+ AA +LFN++P NS NYVVLAS Y+AAGLW +A K RKLME+   KKN+G S+ Q+T
Sbjct: 521 LGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTKKNAGYSFFQAT 580

Query: 551 RKSATLL 531
           +KS  LL
Sbjct: 581 KKSIPLL 587



 Score = 87.0 bits (214), Expect = 5e-15
 Identities = 40/118 (33%), Positives = 65/118 (55%)
 Frame = -1

Query: 911  MVGKYKILPRAEHYSCMVDLFARGGQLEEAYDLICKMQIKPNASLWGSILGACSIYGDTT 732
            M  ++ + P  EH  C++DL  R G+L  A   I +M + PN   W S+L AC I+G+  
Sbjct: 1479 MTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIHGNLE 1538

Query: 731  LGEVAAKHLFNLEPTNSANYVVLASTYAAAGLWGNALKTRKLMEDAGLKKNSGCSYLQ 558
            L    A+HL  L+P++ + YV+ ++  A +G W +    RK M    +KK   CS+++
Sbjct: 1539 LARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSWVK 1596


>ref|XP_002310672.1| predicted protein [Populus trichocarpa] gi|222853575|gb|EEE91122.1|
           predicted protein [Populus trichocarpa]
          Length = 551

 Score =  169 bits (429), Expect = 6e-40
 Identities = 84/124 (67%), Positives = 96/124 (77%)
 Frame = -1

Query: 911 MVGKYKILPRAEHYSCMVDLFARGGQLEEAYDLICKMQIKPNASLWGSILGACSIYGDTT 732
           M+ KY ILPRAEH+SCMVDLFARGG LEEAY+LI KM IKPNASLWG+ILGAC IYG+  
Sbjct: 428 MISKYNILPRAEHFSCMVDLFARGGLLEEAYNLINKMNIKPNASLWGAILGACYIYGNMP 487

Query: 731 LGEVAAKHLFNLEPTNSANYVVLASTYAAAGLWGNALKTRKLMEDAGLKKNSGCSYLQST 552
           L E AA HLF ++P NS NYVVLA  YAAAG W NA K RKLME+  LKK  G S++ S 
Sbjct: 488 LAEEAAIHLFKMDPENSVNYVVLADIYAAAGSWDNAWKMRKLMEERNLKKAPGYSFIPSI 547

Query: 551 RKSA 540
            +S+
Sbjct: 548 PQSS 551


>gb|AEW07919.1| Pinus taeda anonymous locus 0_14503_01 genomic sequence
          Length = 160

 Score =  138 bits (348), Expect = 2e-30
 Identities = 64/123 (52%), Positives = 84/123 (68%)
 Frame = -1

Query: 899 YKILPRAEHYSCMVDLFARGGQLEEAYDLICKMQIKPNASLWGSILGACSIYGDTTLGEV 720
           Y I+PR EHY CMVDL  R G L EA+DLI KM  +PNA +W ++LGAC I+ +  L E 
Sbjct: 9   YSIMPRVEHYGCMVDLLGRAGCLAEAHDLIKKMSFEPNADVWSALLGACRIHLNIELAER 68

Query: 719 AAKHLFNLEPTNSANYVVLASTYAAAGLWGNALKTRKLMEDAGLKKNSGCSYLQSTRKSA 540
           AAK LF L+P N+ NYV+L++ YAAAG W N  K RK+M D GLK+  GCS+++   +  
Sbjct: 69  AAKELFELQPENAGNYVLLSNIYAAAGKWDNVGKIRKIMRDKGLKRTPGCSWIEHKNRVH 128

Query: 539 TLL 531
           T +
Sbjct: 129 TFI 131


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