BLASTX nr result

ID: Cnidium21_contig00036083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036083
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE43192.1| SFBBalpha protein [Malus x domestica]                   64   4e-08
gb|ADE43194.1| SFBBalpha protein [Malus x domestica]                   63   7e-08
ref|XP_003628254.1| F-box protein [Medicago truncatula] gi|35552...    62   9e-08
dbj|BAJ52228.1| hypothetical protein [Pyrus pyrifolia]                 62   1e-07
gb|ADE43193.1| SFBBalpha protein [Malus x domestica] gi|30106916...    62   1e-07

>gb|ADE43192.1| SFBBalpha protein [Malus x domestica]
          Length = 392

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 53/215 (24%), Positives = 102/215 (47%), Gaps = 32/215 (14%)
 Frame = +3

Query: 3   ATKQSKLIPPQTILRPHNIGSYG---------FGFDPVDNDFKVVRSIN----------- 122
           AT++ K +P  ++L P  +G +G         FG+D    ++KVVR I            
Sbjct: 142 ATREFKQLPDSSLLLPLPMGKFGLETLFKGLGFGYDCKTKEYKVVRIIENCDCEYSDGKE 201

Query: 123 -------YPFTTEVYSTNMNVWRVVGVGVGANKPDETIPLMGKSNVCVNGFLCWTGGELY 281
                   P+T EVY+T  N W+ + +   ++     IP     ++ + GF  W   +  
Sbjct: 202 SYIERILLPYTAEVYTTAANSWKEIKIDTSSDTDPYCIPY--SCSMYLKGFCYWFANDNG 259

Query: 282 D-IMAFDLHKEVYNCDTKFPVVRPKKVFRFDNATTITTLNDTIA--VIMWEKFNAKIDLW 452
           + I +FDL  E+++   + P  R +  F+F     +   N+++A     +E+    +++W
Sbjct: 260 EYIFSFDLGDEIFH-RIELP-FRRESDFKF---CGLFLYNESVASYCSCYEEDCKLVEIW 314

Query: 453 TLDNVECLRGCGVEASWTQMLSIN--ADLPLPLKY 551
            +D+ +     GV++SWT++L++    D+  PLK+
Sbjct: 315 VMDDYD-----GVKSSWTKLLTVGPFKDIESPLKF 344


>gb|ADE43194.1| SFBBalpha protein [Malus x domestica]
          Length = 392

 Score = 62.8 bits (151), Expect = 7e-08
 Identities = 53/215 (24%), Positives = 102/215 (47%), Gaps = 32/215 (14%)
 Frame = +3

Query: 3   ATKQSKLIPPQTILRPHNIGSYG---------FGFDPVDNDFKVVRSIN----------- 122
           AT++ K +P  ++L P  +G +G         FG+D    ++KVVR I            
Sbjct: 142 ATREFKQLPDSSLLLPLPMGKFGLETLFKGLGFGYDCKTKEYKVVRIIENCDCEYSDGKE 201

Query: 123 -------YPFTTEVYSTNMNVWRVVGVGVGANKPDETIPLMGKSNVCVNGFLCWTGGELY 281
                   P+T EVY+T  N W+ + +   ++     IP     ++ + GF  W   +  
Sbjct: 202 SYIERILLPYTAEVYTTAANSWKEIKIDTSSDTDPYCIPY--SCSLYLKGFCYWFANDNG 259

Query: 282 D-IMAFDLHKEVYNCDTKFPVVRPKKVFRFDNATTITTLNDTIA--VIMWEKFNAKIDLW 452
           + I +FDL  E+++   + P  R +  F+F     +   N+++A     +E+    +++W
Sbjct: 260 EYIFSFDLGDEMFH-RIELP-FRRESDFKF---CGLFLYNESVASYCSCYEEDCKLVEIW 314

Query: 453 TLDNVECLRGCGVEASWTQMLSIN--ADLPLPLKY 551
            +D+ +     GV++SWT++L++    D+  PLK+
Sbjct: 315 VMDDYD-----GVKSSWTKLLTVGPFKDIESPLKF 344


>ref|XP_003628254.1| F-box protein [Medicago truncatula] gi|355522276|gb|AET02730.1|
           F-box protein [Medicago truncatula]
          Length = 378

 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 11/183 (6%)
 Frame = +3

Query: 6   TKQSKLIPPQTILRPHNIGSYGFGFDPVDNDFKVVRSINYPFT---------TEVYSTNM 158
           T + K+IPP      + +  +GFG+D V NDFKV+R +  P            E+YS   
Sbjct: 146 TSEFKIIPPSIQPVENKLPPHGFGYDCVTNDFKVIRKLRDPIEFEGKLYEPFWEIYSLKS 205

Query: 159 NVWRVVGVGVGANKPDETIPLMGKSNVCVNGFLCWTGGELY--DIMAFDLHKEVYNCDTK 332
           + WR +         D  +   G+  V +NGF  W   EL+  DI++F+  KE +   T 
Sbjct: 206 DSWRKLD-----GFDDMHVSYTGRYMVNLNGFCHWF-TELHDNDIVSFNFSKETFIATTL 259

Query: 333 FPVVRPKKVFRFDNATTITTLNDTIAVIMWEKFNAKIDLWTLDNVECLRGCGVEASWTQM 512
                  + + F     +  LND+++VI          +W L  V      G++ SWT++
Sbjct: 260 PSSDVKYRSYNFH----LVELNDSLSVIFNYDRTPDFHIWVLGEV------GIKQSWTKL 309

Query: 513 LSI 521
             +
Sbjct: 310 FVV 312


>dbj|BAJ52228.1| hypothetical protein [Pyrus pyrifolia]
          Length = 393

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 57/231 (24%), Positives = 106/231 (45%), Gaps = 32/231 (13%)
 Frame = +3

Query: 3   ATKQSKLIPPQTILRPHNIGSY---------GFGFDPVDNDFKVVRSIN----------- 122
           +T++ +L+P   +L PH  G +         GFG+D   N++KVV+ +            
Sbjct: 142 STREFRLLPNSCLLVPHPEGKFELETTFHGMGFGYDCKANEYKVVQIVENCEYSDDEQTY 201

Query: 123 -----YPFTTEVYSTNMNVWRVVGVGVGANKPDETIPLMGKSNVCVNGFLCW--TGGELY 281
                YP+T EVY+T  N W+ + + + ++    T P     +V + GF  W  T GE  
Sbjct: 202 QHCIAYPYTAEVYTTAANFWKEIKIDISSS----THPY--PFSVYLKGFCYWFATDGE-E 254

Query: 282 DIMAFDLHKEVYNCDTKFPVVRPKKVFRFDNATTITTLNDTIAVIMW----EKFNAKIDL 449
            I++FDL  E+++      +  P K+    N   +   N++I    +     + +   ++
Sbjct: 255 CILSFDLGDEIFH-----RIQLPSKIESGFNFCGLFLYNESITSYCYRYDPSEDSKLFEI 309

Query: 450 WTLDNVECLRGCGVEASWTQMLSINADLPLP-LKYVHTYFTNGDFLLTSSG 599
           W +D        GV++SWT++L++    P   ++Y  T +     L+ +SG
Sbjct: 310 WVMDGYG-----GVKSSWTKLLTVG---PFKGIEYPLTLWKCDKLLMVASG 352


>gb|ADE43193.1| SFBBalpha protein [Malus x domestica] gi|301069168|dbj|BAJ11963.1|
           MdFBX15 [Malus x domestica]
          Length = 392

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 53/215 (24%), Positives = 101/215 (46%), Gaps = 32/215 (14%)
 Frame = +3

Query: 3   ATKQSKLIPPQTILRPHNIGSYG---------FGFDPVDNDFKVVRSIN----------- 122
           AT++ K +P  ++L P   G +G         FG+D    ++KVVR I            
Sbjct: 142 ATREFKQLPDSSLLLPLPTGKFGLETLFKGLGFGYDCKTKEYKVVRIIENCDCEYSDGKE 201

Query: 123 -------YPFTTEVYSTNMNVWRVVGVGVGANKPDETIPLMGKSNVCVNGFLCWTGGELY 281
                   P+T EVY+T  N W+ + +   ++     IP     ++ + GF  W   +  
Sbjct: 202 SYIERILLPYTAEVYTTAANSWKEIKIDTSSDTDPYCIPY--SRSMYLKGFCYWFANDNG 259

Query: 282 D-IMAFDLHKEVYNCDTKFPVVRPKKVFRFDNATTITTLNDTIA--VIMWEKFNAKIDLW 452
           + I +FDL  E+++   + P  R +  F+F     +   N+++A     +E+    +++W
Sbjct: 260 EYIFSFDLGDEMFH-RIELP-FRRESDFKF---CGLFLYNESVASYCSCYEEDCKLVEIW 314

Query: 453 TLDNVECLRGCGVEASWTQMLSIN--ADLPLPLKY 551
            +D+ +     GV++SWT++L++    D+  PLK+
Sbjct: 315 VMDDYD-----GVKSSWTKLLTVGPFKDIESPLKF 344


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