BLASTX nr result

ID: Cnidium21_contig00036041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036041
         (767 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27814.3| unnamed protein product [Vitis vinifera]              205   1e-50
ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containi...   205   1e-50
gb|ADE77588.1| unknown [Picea sitchensis]                             153   4e-35
ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containi...   149   5e-34
emb|CBI39775.3| unnamed protein product [Vitis vinifera]              149   5e-34

>emb|CBI27814.3| unnamed protein product [Vitis vinifera]
          Length = 555

 Score =  205 bits (521), Expect = 1e-50
 Identities = 100/144 (69%), Positives = 117/144 (81%), Gaps = 1/144 (0%)
 Frame = -2

Query: 766 GFVEEGRKHFESMTRDYLIVPGIEQCACMVDLLGRAGELNEAYEFINNVP-NADAGVWGA 590
           G VEEGRKHFESM RDY I+PG+E CACMVDLLGRAG L EAYEFI+ +P   D  VWGA
Sbjct: 403 GLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGA 462

Query: 589 LLGACRIHGNLELAEHVADRLYKLNPHSISSYALMVNIYAEAGRWEDVARMRKLIDEREP 410
           LLG+CRIH NLELAE VA++L+ L+P +++ Y LM NIYAEAGRWED AR+RKL++ERE 
Sbjct: 463 LLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEEREL 522

Query: 409 KRIPALSSVEVNRRFHTNTSGLRN 338
           K+IP  S VEVNRRFHT  SG R+
Sbjct: 523 KKIPGHSLVEVNRRFHTFLSGSRS 546


>ref|XP_002278128.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290
           [Vitis vinifera]
          Length = 597

 Score =  205 bits (521), Expect = 1e-50
 Identities = 100/144 (69%), Positives = 117/144 (81%), Gaps = 1/144 (0%)
 Frame = -2

Query: 766 GFVEEGRKHFESMTRDYLIVPGIEQCACMVDLLGRAGELNEAYEFINNVP-NADAGVWGA 590
           G VEEGRKHFESM RDY I+PG+E CACMVDLLGRAG L EAYEFI+ +P   D  VWGA
Sbjct: 445 GLVEEGRKHFESMMRDYSIMPGVEHCACMVDLLGRAGSLMEAYEFIDKMPVEPDVSVWGA 504

Query: 589 LLGACRIHGNLELAEHVADRLYKLNPHSISSYALMVNIYAEAGRWEDVARMRKLIDEREP 410
           LLG+CRIH NLELAE VA++L+ L+P +++ Y LM NIYAEAGRWED AR+RKL++ERE 
Sbjct: 505 LLGSCRIHSNLELAELVAEKLFLLDPQTVTFYVLMSNIYAEAGRWEDAARLRKLMEEREL 564

Query: 409 KRIPALSSVEVNRRFHTNTSGLRN 338
           K+IP  S VEVNRRFHT  SG R+
Sbjct: 565 KKIPGHSLVEVNRRFHTFLSGSRS 588


>gb|ADE77588.1| unknown [Picea sitchensis]
          Length = 312

 Score =  153 bits (386), Expect = 4e-35
 Identities = 74/141 (52%), Positives = 97/141 (68%), Gaps = 1/141 (0%)
 Frame = -2

Query: 766 GFVEEGRKHFESMTRDYLIVPGIEQCACMVDLLGRAGELNEAYEFINNVP-NADAGVWGA 590
           G V+EG K +  MT DY I P +E  ACMVDLLGRAG LNEA++FI  +P    A VWGA
Sbjct: 55  GLVDEGWKCYNCMTLDYAITPTVEHYACMVDLLGRAGHLNEAWDFIEKMPIEPGASVWGA 114

Query: 589 LLGACRIHGNLELAEHVADRLYKLNPHSISSYALMVNIYAEAGRWEDVARMRKLIDEREP 410
            LG+CRIH N+EL E VA+ L  L+P +   Y L+ NIYA AGRW+DVA++RK++ E++ 
Sbjct: 115 FLGSCRIHCNIELGERVAELLLNLDPDNAGYYVLLSNIYAAAGRWDDVAKVRKMMKEKDV 174

Query: 409 KRIPALSSVEVNRRFHTNTSG 347
           K+ P  S +EVN + H+   G
Sbjct: 175 KKSPGCSLIEVNNKLHSFVVG 195


>ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 617

 Score =  149 bits (377), Expect = 5e-34
 Identities = 77/131 (58%), Positives = 94/131 (71%), Gaps = 1/131 (0%)
 Frame = -2

Query: 766 GFVEEGRKHFESMTRDYLIVPGIEQCACMVDLLGRAGELNEAYEFINNVPNADAGV-WGA 590
           G VE+GRK+F SMTRDY IVP IE   CMVDL  RAG L EA+EFI N+P A  GV WGA
Sbjct: 360 GMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGA 419

Query: 589 LLGACRIHGNLELAEHVADRLYKLNPHSISSYALMVNIYAEAGRWEDVARMRKLIDEREP 410
           LLG C++H N++LAE     L KL+P +   Y ++ NIYAEAGRWEDVAR+RKL+ +R  
Sbjct: 420 LLGGCKVHKNIKLAEEATRHLSKLDPLNDGYYVVLSNIYAEAGRWEDVARVRKLMRDRGV 479

Query: 409 KRIPALSSVEV 377
           K+ P  SS+ V
Sbjct: 480 KKTPGWSSIMV 490


>emb|CBI39775.3| unnamed protein product [Vitis vinifera]
          Length = 599

 Score =  149 bits (377), Expect = 5e-34
 Identities = 75/141 (53%), Positives = 97/141 (68%), Gaps = 1/141 (0%)
 Frame = -2

Query: 766 GFVEEGRKHFESMTRDYLIVPGIEQCACMVDLLGRAGELNEAYEFINNVPNADAGV-WGA 590
           G + EGR+ F SMTRDY I+P IE   CMVDLL RAG L+EA+EFI N+P    GV WGA
Sbjct: 342 GLISEGRRFFASMTRDYGIIPQIEHYGCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGA 401

Query: 589 LLGACRIHGNLELAEHVADRLYKLNPHSISSYALMVNIYAEAGRWEDVARMRKLIDEREP 410
           LLGACR+H N+E+AE     L +L+P +   Y ++ NIYAEAGRWED AR+RK + +R+ 
Sbjct: 402 LLGACRVHKNVEMAEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQV 461

Query: 409 KRIPALSSVEVNRRFHTNTSG 347
           K+ P  SS+ V+   H   +G
Sbjct: 462 KKTPGWSSITVDGVVHEFVAG 482


Top