BLASTX nr result

ID: Cnidium21_contig00036027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00036027
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520087.1| origin recognition complex subunit, putative...    99   3e-19
ref|XP_002871730.1| ATORC3/ORC3 [Arabidopsis lyrata subsp. lyrat...    82   5e-14
ref|XP_003577733.1| PREDICTED: origin recognition complex subuni...    81   8e-14
ref|NP_197171.2| origin recognition complex subunit 3 [Arabidops...    80   1e-13
ref|NP_001105730.1| origin recognition complex subunit 3 [Zea ma...    79   4e-13

>ref|XP_002520087.1| origin recognition complex subunit, putative [Ricinus communis]
           gi|223540851|gb|EEF42411.1| origin recognition complex
           subunit, putative [Ricinus communis]
          Length = 715

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 53/104 (50%), Positives = 69/104 (66%)
 Frame = +3

Query: 3   SGFNFGHKVANFLRNCFLRQDGTLSSIVRALKMSIIHHFSMEPLSFILKGLLDQNDGQVL 182
           SGF+ GHKVA FLRN F+  DGTL+S +RALK++   HFSMEPLSF+L   L++ D +VL
Sbjct: 316 SGFSIGHKVAVFLRNYFVSHDGTLTSFIRALKIACAQHFSMEPLSFMLLWFLEE-DNKVL 374

Query: 183 FSWKHETLSEAMLSRAFNLPSYMGNKLGEPNGEILEQGLSQLKR 314
               +    E M   AF LPS +  K+ E NG+ L  GLS+LK+
Sbjct: 375 HGENYGLSPENMCKHAFELPSCLRKKMVEQNGDTLVHGLSELKK 418


>ref|XP_002871730.1| ATORC3/ORC3 [Arabidopsis lyrata subsp. lyrata]
           gi|297317567|gb|EFH47989.1| ATORC3/ORC3 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 741

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 48/104 (46%), Positives = 63/104 (60%)
 Frame = +3

Query: 3   SGFNFGHKVANFLRNCFLRQDGTLSSIVRALKMSIIHHFSMEPLSFILKGLLDQNDGQVL 182
           SGF   HKVA F+R+ FL QDGTL+S VR LK++ + HFS+EPLS +L+ L      Q L
Sbjct: 327 SGFTVSHKVALFMRSYFLCQDGTLTSFVRTLKIACLQHFSLEPLSIMLEHLCHDGVNQ-L 385

Query: 183 FSWKHETLSEAMLSRAFNLPSYMGNKLGEPNGEILEQGLSQLKR 314
                  L+EA +  AF+LPS M NK+     E+L   L  L+R
Sbjct: 386 SGEGTGLLTEATMKHAFDLPSVMRNKITRSTFEMLPHFLMDLQR 429


>ref|XP_003577733.1| PREDICTED: origin recognition complex subunit 3-like [Brachypodium
           distachyon]
          Length = 729

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 44/106 (41%), Positives = 65/106 (61%)
 Frame = +3

Query: 3   SGFNFGHKVANFLRNCFLRQDGTLSSIVRALKMSIIHHFSMEPLSFILKGLLDQNDGQVL 182
           +GF+  H+VA FLRN F R DGT++S + ALK++   HFS+EPLSF+  G+L++ D +  
Sbjct: 319 AGFSISHEVAVFLRNYFFRHDGTITSFISALKLACSKHFSIEPLSFLCMGMLEE-DSENF 377

Query: 183 FSWKHETLSEAMLSRAFNLPSYMGNKLGEPNGEILEQGLSQLKRSQ 320
           +  K + L +AM   AF LPS            ++E GLS+L + Q
Sbjct: 378 WRDKFDALPQAMQKSAFGLPSCTRENYSVKTDNVVE-GLSELMKFQ 422


>ref|NP_197171.2| origin recognition complex subunit 3 [Arabidopsis thaliana]
           gi|47681285|gb|AAT37463.1| origin recognition complex
           protein 3 [Arabidopsis thaliana]
           gi|332004943|gb|AED92326.1| origin recognition complex
           subunit 3 [Arabidopsis thaliana]
          Length = 734

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 47/104 (45%), Positives = 62/104 (59%)
 Frame = +3

Query: 3   SGFNFGHKVANFLRNCFLRQDGTLSSIVRALKMSIIHHFSMEPLSFILKGLLDQNDGQVL 182
           SGF   HKVA F+R+ FL QDGTL+S VR LK++ + HFS+EPLS +L+        Q L
Sbjct: 320 SGFTVSHKVALFMRSYFLCQDGTLTSFVRTLKIACLQHFSLEPLSIMLEHFCHDGVNQ-L 378

Query: 183 FSWKHETLSEAMLSRAFNLPSYMGNKLGEPNGEILEQGLSQLKR 314
                E L+EA +  AF+LPS   NK+     E+L   L  L+R
Sbjct: 379 SGEGTELLTEATMKHAFDLPSVTRNKITRSTFEMLPHFLLDLQR 422


>ref|NP_001105730.1| origin recognition complex subunit 3 [Zea mays]
           gi|15866779|gb|AAL10454.1|AF417483_1 origin recognition
           complex subunit 3 [Zea mays]
          Length = 712

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 44/106 (41%), Positives = 67/106 (63%)
 Frame = +3

Query: 3   SGFNFGHKVANFLRNCFLRQDGTLSSIVRALKMSIIHHFSMEPLSFILKGLLDQNDGQVL 182
           +GF   H+VA FLRN F R DGT++S + ALK++   HFSMEPLSF+  G++++ D +  
Sbjct: 311 TGFCISHEVALFLRNYFFRHDGTITSFITALKLACSKHFSMEPLSFLCIGMVEE-DSEEF 369

Query: 183 FSWKHETLSEAMLSRAFNLPSYMGNKLGEPNGEILEQGLSQLKRSQ 320
           +  K E+L + +   AF+LPS    +    N   + +GLS+L +SQ
Sbjct: 370 WHDKFESLPQTIRKHAFDLPSSKNAR----NSCNMVEGLSRLLKSQ 411


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