BLASTX nr result
ID: Cnidium21_contig00035927
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00035927 (346 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ACY01934.1| hypothetical protein [Beta vulgaris] 75 6e-12 ref|XP_003595669.1| hypothetical protein MTR_2g058890 [Medicago ... 73 3e-11 ref|XP_003619509.1| Zinc knuckle family protein [Medicago trunca... 66 3e-09 ref|XP_003635987.1| Multiple C2 and transmembrane domain-contain... 64 1e-08 pir||G85071 hypothetical protein AT4g07370 [imported] - Arabidop... 64 1e-08 >gb|ACY01934.1| hypothetical protein [Beta vulgaris] Length = 1717 Score = 75.1 bits (183), Expect = 6e-12 Identities = 35/70 (50%), Positives = 49/70 (70%) Frame = +2 Query: 2 LEMNEDVEMPIILGRPFLATAGVNINVKAGRLTLNVGEEKVEFDLNQAMKGQPIELECKV 181 L+M ED ++PIILGRPFL TAG I+VK G+LTL VG++KV F L A+K +E C Sbjct: 665 LDMEEDTQIPIILGRPFLHTAGAVIDVKNGKLTLTVGDDKVTFSLTNALKSPMLEEACYR 724 Query: 182 VDIVEEFVKE 211 +D+++ V + Sbjct: 725 IDVIDVLVND 734 >ref|XP_003595669.1| hypothetical protein MTR_2g058890 [Medicago truncatula] gi|355484717|gb|AES65920.1| hypothetical protein MTR_2g058890 [Medicago truncatula] Length = 157 Score = 72.8 bits (177), Expect = 3e-11 Identities = 34/69 (49%), Positives = 51/69 (73%) Frame = +2 Query: 5 EMNEDVEMPIILGRPFLATAGVNINVKAGRLTLNVGEEKVEFDLNQAMKGQPIELECKVV 184 ++ +D E+ I+LGRPFLATA V INVK G++ +VG+EKVEF++ + MKG I C ++ Sbjct: 28 QIKKDSEISILLGRPFLATASVVINVKYGKIVFHVGDEKVEFEIVKLMKGPSIFDSCCMI 87 Query: 185 DIVEEFVKE 211 D+++ VKE Sbjct: 88 DVIDHRVKE 96 >ref|XP_003619509.1| Zinc knuckle family protein [Medicago truncatula] gi|355494524|gb|AES75727.1| Zinc knuckle family protein [Medicago truncatula] Length = 370 Score = 65.9 bits (159), Expect = 3e-09 Identities = 32/58 (55%), Positives = 43/58 (74%) Frame = +2 Query: 2 LEMNEDVEMPIILGRPFLATAGVNINVKAGRLTLNVGEEKVEFDLNQAMKGQPIELEC 175 +EM ED ++P+ILGRPFLATAG I+VK G+L NVG+E VEF+L + +K I+ C Sbjct: 263 MEMEEDNQVPVILGRPFLATAGAIIDVKNGKLAFNVGKETVEFELAKLIKIPSIKDSC 320 >ref|XP_003635987.1| Multiple C2 and transmembrane domain-containing protein [Medicago truncatula] gi|355501922|gb|AES83125.1| Multiple C2 and transmembrane domain-containing protein [Medicago truncatula] Length = 1370 Score = 64.3 bits (155), Expect = 1e-08 Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 2/77 (2%) Frame = +2 Query: 2 LEMNEDVEMPIILGRPFLATAGVNINVKAGRLTLNVGEEKVEFDLNQAMKGQPIELECKV 181 L ++ED E PII+GRPFLATAG ++VK+GR+ V EE + F+L MKG + C + Sbjct: 1289 LNIDEDNECPIIVGRPFLATAGAIVDVKSGRIVFEVSEEMIGFELENVMKGPALYSCCMI 1348 Query: 182 V--DIVEEFVKEANGHE 226 D+ E F+ + ++ Sbjct: 1349 KDHDVKERFLVSSTQYD 1365 >pir||G85071 hypothetical protein AT4g07370 [imported] - Arabidopsis thaliana gi|5732044|gb|AAD48943.1|AF147262_6 contains similarity to a family of Arabidopsis thaliana hypothetical proteins, which contain similarity to Vicia faba retrotransposon-like gene; see GB:AF077408; may be a pseudogene [Arabidopsis thaliana] gi|7267333|emb|CAB81107.1| AT4g07370 [Arabidopsis thaliana] Length = 531 Score = 64.3 bits (155), Expect = 1e-08 Identities = 37/89 (41%), Positives = 57/89 (64%), Gaps = 1/89 (1%) Frame = +2 Query: 2 LEMNEDVEMPIILGRPFLATAGVNINVKAGRLTLNVGEE-KVEFDLNQAMKGQPIELECK 178 L M+E+ + P+ILGRPFLAT GV I+VK G++ LN+G+ +++FD+N AMK IE + Sbjct: 295 LNMDEEPKDPLILGRPFLATVGVIIDVKQGKIDLNLGKNFEMKFDINDAMKKPTIEEQTF 354 Query: 179 VVDIVEEFVKEANGHEEVKTGKQSFLARE 265 +V V+ E+++GK +L E Sbjct: 355 LVKEVDRLA------GELQSGKPGYLPSE 377