BLASTX nr result

ID: Cnidium21_contig00035927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035927
         (346 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01934.1| hypothetical protein [Beta vulgaris]                    75   6e-12
ref|XP_003595669.1| hypothetical protein MTR_2g058890 [Medicago ...    73   3e-11
ref|XP_003619509.1| Zinc knuckle family protein [Medicago trunca...    66   3e-09
ref|XP_003635987.1| Multiple C2 and transmembrane domain-contain...    64   1e-08
pir||G85071 hypothetical protein AT4g07370 [imported] - Arabidop...    64   1e-08

>gb|ACY01934.1| hypothetical protein [Beta vulgaris]
          Length = 1717

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 35/70 (50%), Positives = 49/70 (70%)
 Frame = +2

Query: 2   LEMNEDVEMPIILGRPFLATAGVNINVKAGRLTLNVGEEKVEFDLNQAMKGQPIELECKV 181
           L+M ED ++PIILGRPFL TAG  I+VK G+LTL VG++KV F L  A+K   +E  C  
Sbjct: 665 LDMEEDTQIPIILGRPFLHTAGAVIDVKNGKLTLTVGDDKVTFSLTNALKSPMLEEACYR 724

Query: 182 VDIVEEFVKE 211
           +D+++  V +
Sbjct: 725 IDVIDVLVND 734


>ref|XP_003595669.1| hypothetical protein MTR_2g058890 [Medicago truncatula]
           gi|355484717|gb|AES65920.1| hypothetical protein
           MTR_2g058890 [Medicago truncatula]
          Length = 157

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/69 (49%), Positives = 51/69 (73%)
 Frame = +2

Query: 5   EMNEDVEMPIILGRPFLATAGVNINVKAGRLTLNVGEEKVEFDLNQAMKGQPIELECKVV 184
           ++ +D E+ I+LGRPFLATA V INVK G++  +VG+EKVEF++ + MKG  I   C ++
Sbjct: 28  QIKKDSEISILLGRPFLATASVVINVKYGKIVFHVGDEKVEFEIVKLMKGPSIFDSCCMI 87

Query: 185 DIVEEFVKE 211
           D+++  VKE
Sbjct: 88  DVIDHRVKE 96


>ref|XP_003619509.1| Zinc knuckle family protein [Medicago truncatula]
           gi|355494524|gb|AES75727.1| Zinc knuckle family protein
           [Medicago truncatula]
          Length = 370

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 32/58 (55%), Positives = 43/58 (74%)
 Frame = +2

Query: 2   LEMNEDVEMPIILGRPFLATAGVNINVKAGRLTLNVGEEKVEFDLNQAMKGQPIELEC 175
           +EM ED ++P+ILGRPFLATAG  I+VK G+L  NVG+E VEF+L + +K   I+  C
Sbjct: 263 MEMEEDNQVPVILGRPFLATAGAIIDVKNGKLAFNVGKETVEFELAKLIKIPSIKDSC 320


>ref|XP_003635987.1| Multiple C2 and transmembrane domain-containing protein [Medicago
            truncatula] gi|355501922|gb|AES83125.1| Multiple C2 and
            transmembrane domain-containing protein [Medicago
            truncatula]
          Length = 1370

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/77 (41%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
 Frame = +2

Query: 2    LEMNEDVEMPIILGRPFLATAGVNINVKAGRLTLNVGEEKVEFDLNQAMKGQPIELECKV 181
            L ++ED E PII+GRPFLATAG  ++VK+GR+   V EE + F+L   MKG  +   C +
Sbjct: 1289 LNIDEDNECPIIVGRPFLATAGAIVDVKSGRIVFEVSEEMIGFELENVMKGPALYSCCMI 1348

Query: 182  V--DIVEEFVKEANGHE 226
               D+ E F+  +  ++
Sbjct: 1349 KDHDVKERFLVSSTQYD 1365


>pir||G85071 hypothetical protein AT4g07370 [imported] - Arabidopsis thaliana
           gi|5732044|gb|AAD48943.1|AF147262_6 contains similarity
           to a family of Arabidopsis thaliana hypothetical
           proteins, which contain similarity to Vicia faba
           retrotransposon-like gene; see GB:AF077408; may be a
           pseudogene [Arabidopsis thaliana]
           gi|7267333|emb|CAB81107.1| AT4g07370 [Arabidopsis
           thaliana]
          Length = 531

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 37/89 (41%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
 Frame = +2

Query: 2   LEMNEDVEMPIILGRPFLATAGVNINVKAGRLTLNVGEE-KVEFDLNQAMKGQPIELECK 178
           L M+E+ + P+ILGRPFLAT GV I+VK G++ LN+G+  +++FD+N AMK   IE +  
Sbjct: 295 LNMDEEPKDPLILGRPFLATVGVIIDVKQGKIDLNLGKNFEMKFDINDAMKKPTIEEQTF 354

Query: 179 VVDIVEEFVKEANGHEEVKTGKQSFLARE 265
           +V  V+          E+++GK  +L  E
Sbjct: 355 LVKEVDRLA------GELQSGKPGYLPSE 377


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