BLASTX nr result

ID: Cnidium21_contig00035918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035918
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314446.1| predicted protein [Populus trichocarpa] gi|2...    83   9e-14
ref|XP_002331861.1| predicted protein [Populus trichocarpa] gi|2...    70   5e-12
gb|AFM95209.1| hypothetical protein [Cynara cardunculus var. sco...    75   2e-11
gb|AFN88198.1| retropepsin-like protein [Phaseolus vulgaris]           52   7e-06

>ref|XP_002314446.1| predicted protein [Populus trichocarpa]
           gi|224148286|ref|XP_002336624.1| predicted protein
           [Populus trichocarpa] gi|222836376|gb|EEE74783.1|
           predicted protein [Populus trichocarpa]
           gi|222863486|gb|EEF00617.1| predicted protein [Populus
           trichocarpa]
          Length = 140

 Score = 82.8 bits (203), Expect = 9e-14
 Identities = 41/74 (55%), Positives = 58/74 (78%)
 Frame = +3

Query: 381 MSLEEIVKSMATNTLQFQQETRSGIKNLENQVCQLAETVGKLQAHNSMKLPSQTEKNPKE 560
           MSLE+IVKS+ATNT  FQQE R+ I+NL+NQ+ QL  ++ K++A N  KLP Q E NPKE
Sbjct: 1   MSLEDIVKSLATNTQMFQQEMRASIQNLKNQISQLTSSMHKIEA-NKGKLPCQAEINPKE 59

Query: 561 NACAISLKNGKQLE 602
           N  A++L++GK+++
Sbjct: 60  NVSAMTLRSGKKVQ 73


>ref|XP_002331861.1| predicted protein [Populus trichocarpa] gi|222875379|gb|EEF12510.1|
           predicted protein [Populus trichocarpa]
          Length = 174

 Score = 70.5 bits (171), Expect(2) = 5e-12
 Identities = 38/71 (53%), Positives = 52/71 (73%)
 Frame = +3

Query: 378 GMSLEEIVKSMATNTLQFQQETRSGIKNLENQVCQLAETVGKLQAHNSMKLPSQTEKNPK 557
           GMSLEEI+KS+A+NT  FQ ETR+ I+NLE QV QL  ++ K +  +  KL SQ + N +
Sbjct: 79  GMSLEEIMKSLASNTQMFQLETRASIQNLETQVSQLTSSLSKRET-SKEKLSSQAKINLR 137

Query: 558 ENACAISLKNG 590
           ENA AI+L++G
Sbjct: 138 ENASAITLRSG 148



 Score = 26.9 bits (58), Expect(2) = 5e-12
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +2

Query: 251 GWKDHPSLRYG 283
           GW+DH SLRYG
Sbjct: 42  GWRDHSSLRYG 52


>gb|AFM95209.1| hypothetical protein [Cynara cardunculus var. scolymus]
          Length = 421

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 40/73 (54%), Positives = 54/73 (73%)
 Frame = +3

Query: 378 GMSLEEIVKSMATNTLQFQQETRSGIKNLENQVCQLAETVGKLQAHNSMKLPSQTEKNPK 557
           GMSLE+IVK++ATNTLQFQQ+T + I+NL  Q+ QLA  V +L++    KLPSQTE  PK
Sbjct: 99  GMSLEDIVKNLATNTLQFQQKTEASIQNLGAQMTQLATAVSRLESRG--KLPSQTETPPK 156

Query: 558 ENACAISLKNGKQ 596
            N   ++LK+ K+
Sbjct: 157 LNVSMMTLKSEKK 169


>gb|AFN88198.1| retropepsin-like protein [Phaseolus vulgaris]
          Length = 725

 Score = 52.4 bits (124), Expect(2) = 7e-06
 Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 14/85 (16%)
 Frame = +3

Query: 375 GGMSLEEIVKSMATNTLQFQQETRS--------------GIKNLENQVCQLAETVGKLQA 512
           GG SLE+++K MA    QFQQ T                 I NLENQ+ QL   + ++ +
Sbjct: 321 GGSSLEDVIKHMAEVNTQFQQRTSEIVQRTDERVQRIEVSIHNLENQIGQLVTRMNEMNS 380

Query: 513 HNSMKLPSQTEKNPKENACAISLKN 587
             S KLPSQT  NP  N  +I+L++
Sbjct: 381 KGSDKLPSQTAINP-HNVNSITLRS 404



 Score = 23.9 bits (50), Expect(2) = 7e-06
 Identities = 7/10 (70%), Positives = 10/10 (100%)
 Frame = +2

Query: 251 GWKDHPSLRY 280
           GWK+HP+LR+
Sbjct: 309 GWKNHPNLRW 318


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