BLASTX nr result

ID: Cnidium21_contig00035895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035895
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528317.1| RING-H2 finger protein ATL2N, putative [Rici...   122   4e-26
ref|XP_002312167.1| predicted protein [Populus trichocarpa] gi|2...   121   1e-25
ref|XP_003552290.1| PREDICTED: RING-H2 finger protein ATL66-like...   120   1e-25
gb|ACU23806.1| unknown [Glycine max]                                  117   1e-24
ref|XP_003538474.1| PREDICTED: RING-H2 finger protein ATL66-like...   117   2e-24

>ref|XP_002528317.1| RING-H2 finger protein ATL2N, putative [Ricinus communis]
           gi|223532272|gb|EEF34075.1| RING-H2 finger protein
           ATL2N, putative [Ricinus communis]
          Length = 165

 Score =  122 bits (307), Expect = 4e-26
 Identities = 62/149 (41%), Positives = 77/149 (51%), Gaps = 10/149 (6%)
 Frame = +2

Query: 95  HWHYSQLQDDN-FEFHGKPXXXXXXXXXXXXXXXXXXXXARWFCRYLPNSRATANETHAP 271
           HWH+S    DN FE HG+                     ARW C Y  +   ++   HAP
Sbjct: 11  HWHFSTEPHDNGFEIHGRTLFFVVVLFALVILVTLLFLYARWVCHYQHHHFPSSQANHAP 70

Query: 272 Q------QGVDTNMYLSLPVVLYEVLKKEKS---VVECCICIGVFEEQDKVKVLPVCGHC 424
                  QG+   +  ++ + L+             ECCIC+GVFE+ DKVKVLP C HC
Sbjct: 71  HDLSPCHQGLHPTVIKAMSITLHRSSSSSLGYYCTTECCICLGVFEDGDKVKVLPECSHC 130

Query: 425 FHSECVDKWLSTQSSCPICRADLRVDSLV 511
           FHSECVDKWL+ QSSCP+CRA L  DS V
Sbjct: 131 FHSECVDKWLTAQSSCPLCRASLHRDSAV 159


>ref|XP_002312167.1| predicted protein [Populus trichocarpa] gi|222851987|gb|EEE89534.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score =  121 bits (303), Expect = 1e-25
 Identities = 59/158 (37%), Positives = 87/158 (55%), Gaps = 10/158 (6%)
 Frame = +2

Query: 68  MAAGNSSSEHWHYSQLQDDNFEFHGKPXXXXXXXXXXXXXXXXXXXXARWFC-----RYL 232
           MA+ +S   HWHY +L +++F+  G+                     ARW C       L
Sbjct: 1   MASQDSQPFHWHYEELDENDFQVRGRALFYVLIVGSMIILIALLSIYARWVCLENTRHNL 60

Query: 233 PNSRATANETHAPQQGVDTNMYLSLPVVLYEV---LKKEKSVVE--CCICIGVFEEQDKV 397
           P+     +    P +G+++ +  +LP+ L++         + VE  CCIC+GVFE+ D++
Sbjct: 61  PSRLPVHHAPRLPPRGLESTIIKALPITLHKSNLGTSNNGTAVESECCICLGVFEDGDRL 120

Query: 398 KVLPVCGHCFHSECVDKWLSTQSSCPICRADLRVDSLV 511
           KVLP C HCFH +CVDKWL TQSSCP+CRA +R +S V
Sbjct: 121 KVLPQCQHCFHCDCVDKWLVTQSSCPLCRASIRAESAV 158


>ref|XP_003552290.1| PREDICTED: RING-H2 finger protein ATL66-like [Glycine max]
          Length = 175

 Score =  120 bits (302), Expect = 1e-25
 Identities = 63/157 (40%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
 Frame = +2

Query: 68  MAAGNSSSEHWHYSQLQDDNFEFHGKPXXXXXXXXXXXXXXXXXXXXARWFCRY---LPN 238
           M++ +S S  WHY++L D + E  G+                      RW CRY   LP 
Sbjct: 1   MSSPDSRSFSWHYTELDDRDLEIRGRTLFFVIVLFSIILLVTVLFIYTRWVCRYQGRLPT 60

Query: 239 SRATANETHAPQ----QGVDTNMYLSLPVVLYEVLK-KEKSV---VECCICIGVFEEQDK 394
           +  TA   HAP     QG+D      LP++L+     +E+S     ECCIC+G F + +K
Sbjct: 61  TAFTAAAAHAPPLAQPQGMDPASIKKLPIILHHAPSDREESAWDETECCICLGEFRDGEK 120

Query: 395 VKVLPVCGHCFHSECVDKWLSTQSSCPICRADLRVDS 505
           VKVLP C H FH +CVDKWL+  SSCP+CRA L+V+S
Sbjct: 121 VKVLPACDHYFHCDCVDKWLTHHSSCPLCRASLKVES 157


>gb|ACU23806.1| unknown [Glycine max]
          Length = 175

 Score =  117 bits (294), Expect = 1e-24
 Identities = 62/157 (39%), Positives = 84/157 (53%), Gaps = 11/157 (7%)
 Frame = +2

Query: 68  MAAGNSSSEHWHYSQLQDDNFEFHGKPXXXXXXXXXXXXXXXXXXXXARWFCRY---LPN 238
           M++ +S S  WHY++L D + E  G+                      RW CRY   LP 
Sbjct: 1   MSSPDSRSFSWHYTELDDRDLEIRGRTLFFVIVLFSIILLVTVLFIYTRWVCRYQGRLPT 60

Query: 239 SRATANETHAPQ----QGVDTNMYLSLPVVLYEVLK-KEKSV---VECCICIGVFEEQDK 394
           +  TA   HA      QG+D      LP++L+     +E+S     ECCIC+G F + +K
Sbjct: 61  TAFTAAAAHASPLAQPQGMDPASIKKLPIILHHAPSDREESAWDETECCICLGEFRDGEK 120

Query: 395 VKVLPVCGHCFHSECVDKWLSTQSSCPICRADLRVDS 505
           VKVLP C H FH +CVDKWL+  SSCP+CRA L+V+S
Sbjct: 121 VKVLPACDHYFHCDCVDKWLTHHSSCPLCRASLKVES 157


>ref|XP_003538474.1| PREDICTED: RING-H2 finger protein ATL66-like [Glycine max]
          Length = 175

 Score =  117 bits (292), Expect = 2e-24
 Identities = 60/157 (38%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
 Frame = +2

Query: 68  MAAGNSSSEHWHYSQLQDDNFEFHGKPXXXXXXXXXXXXXXXXXXXXARWFCRY---LPN 238
           M+  ++ S +WHY++L D + E  G+                      RW CRY   LP 
Sbjct: 1   MSNPDTRSFNWHYTELDDRDLEIRGRTLFFVIVLFSIILLVTVLFIYTRWVCRYQGRLPT 60

Query: 239 SRATANETHAPQ----QGVDTNMYLSLPVVLYEV-LKKEKSV---VECCICIGVFEEQDK 394
           +  +A   HAP     QG+D      LP++L+     +++S     ECCIC+G F + +K
Sbjct: 61  TAFSAAAVHAPPLAPPQGLDPASIKKLPIILHHAPADRDESAWDETECCICLGEFRDGEK 120

Query: 395 VKVLPVCGHCFHSECVDKWLSTQSSCPICRADLRVDS 505
           VKVLP C H FH +CVDKWL+  SSCP+CRA L+V+S
Sbjct: 121 VKVLPACDHYFHCDCVDKWLTHHSSCPLCRASLKVES 157


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