BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035885
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523370.1| pentatricopeptide repeat-containing protein,...   117   1e-24
ref|XP_003637737.1| Pentatricopeptide repeat-containing protein ...   112   4e-23
ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
ref|XP_002320193.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containi...   103   1e-20

>ref|XP_002523370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537458|gb|EEF39086.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 695

 Score =  117 bits (292), Expect = 1e-24
 Identities = 56/88 (63%), Positives = 69/88 (78%)
 Frame = -3

Query: 266 KGQFEDAVKLLNLMETEGIKPDIVTYNSLVSGHAVWGFFDEALDTIRRIEISGLKPNVVS 87
           KG F+DA +LLN M+ EGI+ DIVT+N LVSG+++WG  +EAL  I  I+ SGL PNVVS
Sbjct: 481 KGLFDDAKRLLNKMKEEGIRADIVTWNGLVSGYSIWGHNEEALAVINEIKSSGLTPNVVS 540

Query: 86  WTALISGCLQNEKYKPALDFFIMMQKEG 3
           WTALISGC QN  YK +L+FFI MQ+EG
Sbjct: 541 WTALISGCSQNGNYKESLEFFIQMQQEG 568



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/64 (39%), Positives = 44/64 (68%)
 Frame = -3

Query: 263 GQFEDAVKLLNLMETEGIKPDIVTYNSLVSGHAVWGFFDEALDTIRRIEISGLKPNVVSW 84
           G    A KL + ME+  +KPDI+T+N L+SGHA+ G + E L  +++++++G +PN  S 
Sbjct: 346 GYLNGAWKLFHEMESSSVKPDIITWNCLLSGHALHGSYKEVLMILQKMQVTGFRPNSSSI 405

Query: 83  TALI 72
           T+++
Sbjct: 406 TSVL 409


>ref|XP_003637737.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355503672|gb|AES84875.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 561

 Score =  112 bits (279), Expect = 4e-23
 Identities = 57/87 (65%), Positives = 65/87 (74%)
 Frame = -3

Query: 266 KGQFEDAVKLLNLMETEGIKPDIVTYNSLVSGHAVWGFFDEALDTIRRIEISGLKPNVVS 87
           KGQF +AVKLLN M  EGI PD+VT+N LVSG+++ G  DEAL  I RI+ SG+ PNVVS
Sbjct: 97  KGQFGEAVKLLNQMVEEGITPDLVTWNGLVSGYSMQGRIDEALTIINRIKSSGITPNVVS 156

Query: 86  WTALISGCLQNEKYKPALDFFIMMQKE 6
           WTALISGC QNEKY  AL  F  MQ E
Sbjct: 157 WTALISGCSQNEKYMDALKIFSQMQAE 183


>ref|XP_003548424.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/87 (63%), Positives = 67/87 (77%)
 Frame = -3

Query: 266 KGQFEDAVKLLNLMETEGIKPDIVTYNSLVSGHAVWGFFDEALDTIRRIEISGLKPNVVS 87
           KG F++A KLLN M+ EGIKPD+VT+NSLVSG+++ G  +EAL  I RI+  GL PNVVS
Sbjct: 447 KGLFDNAEKLLNQMKEEGIKPDLVTWNSLVSGYSMSGRSEEALAVINRIKSLGLTPNVVS 506

Query: 86  WTALISGCLQNEKYKPALDFFIMMQKE 6
           WTA+ISGC QNE Y  AL FF  MQ+E
Sbjct: 507 WTAMISGCCQNENYMDALQFFSQMQEE 533



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 24/60 (40%), Positives = 39/60 (65%)
 Frame = -3

Query: 239 LLNLMETEGIKPDIVTYNSLVSGHAVWGFFDEALDTIRRIEISGLKPNVVSWTALISGCL 60
           LL  ME+ G+KPDI+T+NSL+SGH + G ++  L   R ++ +G KP+  S T+ +   +
Sbjct: 320 LLQEMESSGVKPDIITWNSLLSGHLLQGSYENVLTNFRSLQSAGFKPDSCSITSALQAVI 379


>ref|XP_002320193.1| predicted protein [Populus trichocarpa] gi|222860966|gb|EEE98508.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score =  106 bits (265), Expect = 2e-21
 Identities = 51/88 (57%), Positives = 67/88 (76%)
 Frame = -3

Query: 266 KGQFEDAVKLLNLMETEGIKPDIVTYNSLVSGHAVWGFFDEALDTIRRIEISGLKPNVVS 87
           KG F+ A +LLN M+ EGIKPD++T+NSLV+G+++ G   EAL  I  I+ISGL PNVVS
Sbjct: 36  KGHFDHAKRLLNRMKEEGIKPDLITWNSLVAGYSMRGHTKEALALIHDIKISGLTPNVVS 95

Query: 86  WTALISGCLQNEKYKPALDFFIMMQKEG 3
           WTALISGC QN  Y  +++ F+ MQ+EG
Sbjct: 96  WTALISGCSQNGNYSESIEAFVQMQEEG 123


>ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  103 bits (258), Expect = 1e-20
 Identities = 53/87 (60%), Positives = 65/87 (74%)
 Frame = -3

Query: 266 KGQFEDAVKLLNLMETEGIKPDIVTYNSLVSGHAVWGFFDEALDTIRRIEISGLKPNVVS 87
           KG F++A KLL  M+ EGIK D+VT+NSLVSG+++ G  +EAL  I RI+  GL PNVVS
Sbjct: 447 KGLFDNAEKLLIQMKEEGIKADLVTWNSLVSGYSMSGCSEEALAVINRIKSLGLTPNVVS 506

Query: 86  WTALISGCLQNEKYKPALDFFIMMQKE 6
           WTA+ISGC QNE Y  AL FF  MQ+E
Sbjct: 507 WTAMISGCCQNENYTDALQFFSQMQEE 533



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 26/69 (37%), Positives = 41/69 (59%)
 Frame = -3

Query: 263 GQFEDAVKLLNLMETEGIKPDIVTYNSLVSGHAVWGFFDEALDTIRRIEISGLKPNVVSW 84
           G    A  L   ME+  IKPDI+T+NSL+SGH + G ++  L  IR ++ +G KP+  S 
Sbjct: 312 GCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSI 371

Query: 83  TALISGCLQ 57
           T+ +   ++
Sbjct: 372 TSALQAVIE 380