BLASTX nr result

ID: Cnidium21_contig00035819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035819
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD43141.1| cyclin D2 [Daucus carota]                             139   3e-31
emb|CAA09852.1| cyclin D2.1 protein [Nicotiana tabacum]               100   1e-19
ref|XP_003613088.1| Cyclin D2 [Medicago truncatula] gi|355514423...    95   7e-18
gb|AEV41134.1| D2/4-type cyclin [Populus x canadensis]                 87   2e-15
ref|XP_003634482.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-D4-2-...    85   5e-15

>emb|CAD43141.1| cyclin D2 [Daucus carota]
          Length = 382

 Score =  139 bits (349), Expect = 3e-31
 Identities = 72/111 (64%), Positives = 81/111 (72%)
 Frame = -3

Query: 334 MRFH*GFTNRVFNMADQSLICTETNDLCFDDVEAKDDQTHQEDCENVVGNGSEPLICLVP 155
           MRF   +T  VFNM D SL+CTETN+LCFDD+EA+DDQ  + DCENVVGN SE LIC VP
Sbjct: 1   MRFTRVYTE-VFNMTDHSLLCTETNNLCFDDLEARDDQDPRIDCENVVGNESEALICAVP 59

Query: 154 LQSDEILCLLFERENQLLPRGDFLQRLRSGDLDLCVRKEALDWIYKAHAHY 2
           LQ DE    +FE +    P   F    RSG+LDLCVRKEALDWIYKAHAHY
Sbjct: 60  LQRDEDFVFVFESKVNFCPEVIF-STDRSGELDLCVRKEALDWIYKAHAHY 109


>emb|CAA09852.1| cyclin D2.1 protein [Nicotiana tabacum]
          Length = 354

 Score =  100 bits (249), Expect = 1e-19
 Identities = 52/108 (48%), Positives = 72/108 (66%), Gaps = 5/108 (4%)
 Frame = -3

Query: 310 NRVFNMADQSLICTETNDLCFDDVEA-----KDDQTHQEDCENVVGNGSEPLICLVPLQS 146
           + +++    +L+CTET  LCFDDV++     ++ +T  +D     G  SEPLI L P  S
Sbjct: 4   DNIYDFVASNLLCTETKSLCFDDVDSLTISQQNIETKSKDLSFNNGIRSEPLIDL-PSLS 62

Query: 145 DEILCLLFERENQLLPRGDFLQRLRSGDLDLCVRKEALDWIYKAHAHY 2
           +E L  + +RE + LP+ D+++RLRSGDLDL VRKEALDWI KAH HY
Sbjct: 63  EECLSFMVQREMEFLPKDDYVERLRSGDLDLSVRKEALDWILKAHMHY 110


>ref|XP_003613088.1| Cyclin D2 [Medicago truncatula] gi|355514423|gb|AES96046.1| Cyclin
           D2 [Medicago truncatula]
          Length = 346

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 49/103 (47%), Positives = 67/103 (65%), Gaps = 3/103 (2%)
 Frame = -3

Query: 301 FNMADQSLICTETNDLCFDDVEAKDD---QTHQEDCENVVGNGSEPLICLVPLQSDEILC 131
           F+ A+ +L+C+E N  CFDDV   D     +      N+   GS+  +C V  QS+EI+ 
Sbjct: 5   FDSAESNLLCSENNSTCFDDVVVDDSGISPSWDHTNVNLDNVGSDSFLCFVA-QSEEIVK 63

Query: 130 LLFERENQLLPRGDFLQRLRSGDLDLCVRKEALDWIYKAHAHY 2
           ++ E+E   LPR D+L RLR GDLDL VR+EALDWI+KAHA+Y
Sbjct: 64  VMVEKEKDHLPREDYLIRLRGGDLDLSVRREALDWIWKAHAYY 106


>gb|AEV41134.1| D2/4-type cyclin [Populus x canadensis]
          Length = 353

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 49/107 (45%), Positives = 65/107 (60%), Gaps = 7/107 (6%)
 Frame = -3

Query: 301 FNMADQSLICTETNDLCFDD-------VEAKDDQTHQEDCENVVGNGSEPLICLVPLQSD 143
           F+ A  +L+C E N+  FDD       VE  +   H  + +    NG     CL P+QSD
Sbjct: 5   FDCAVSNLLCAEDNNSIFDDNDHYDATVEEFEATWHHGNHQICNQNGGGDGGCL-PMQSD 63

Query: 142 EILCLLFERENQLLPRGDFLQRLRSGDLDLCVRKEALDWIYKAHAHY 2
           E L L+ E+E Q LP GD+L+RLR+GDLD+  RKEA+DWI K HAH+
Sbjct: 64  ECLVLMVEKECQHLPNGDYLKRLRNGDLDMGARKEAVDWIAKVHAHF 110


>ref|XP_003634482.1| PREDICTED: LOW QUALITY PROTEIN: cyclin-D4-2-like [Vitis vinifera]
          Length = 325

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 49/110 (44%), Positives = 64/110 (58%), Gaps = 10/110 (9%)
 Frame = -3

Query: 301 FNMADQSLICTETNDLCFDDVE----------AKDDQTHQEDCENVVGNGSEPLICLVPL 152
           F+ A  SL+C E N   FDD +          A   Q H+   +    NG E LI L P+
Sbjct: 5   FDCAASSLLCGEDNSSIFDDADYGAAAEEFETAWHHQNHRSRNQEKSFNGGEFLIGL-PV 63

Query: 151 QSDEILCLLFERENQLLPRGDFLQRLRSGDLDLCVRKEALDWIYKAHAHY 2
           QSDE L L+ E+E+Q LP  D+L RLRSGDLD+  R++ + WI KAHAH+
Sbjct: 64  QSDECLALMIEKESQHLPAADYLMRLRSGDLDIGSRQDVVGWIAKAHAHF 113


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