BLASTX nr result

ID: Cnidium21_contig00035816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035816
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAZ26373.1| hypothetical protein OsJ_10256 [Oryza sativa Japo...   154   9e-36
gb|AAP06879.1| unknown protein [Oryza sativa Japonica Group] gi|...   154   9e-36
emb|CAH67262.1| OSIGBa0101C23.14 [Oryza sativa Indica Group]          152   2e-35
gb|ABA91962.1| transposon protein, putative, Mariner sub-class [...   150   8e-35
gb|ACV32570.1| mar1 transposase [synthetic construct]                 150   8e-35

>gb|EAZ26373.1| hypothetical protein OsJ_10256 [Oryza sativa Japonica Group]
          Length = 479

 Score =  154 bits (388), Expect = 9e-36
 Identities = 75/132 (56%), Positives = 99/132 (75%), Gaps = 2/132 (1%)
 Frame = -3

Query: 407 RPRYDIDGVCTFDGKIGIFPFTIEEAAVRASKNRARGVMEVKPIKSITKLVVKKCLLEKI 228
           RPR+D  G CTFDGKIGIFPFT  EAA R+S++R RG ME+K + S+T+ +++  L+EK+
Sbjct: 261 RPRFDEYGECTFDGKIGIFPFTYWEAAKRSSRSRERGTMELKAMTSVTRDIIRNYLIEKV 320

Query: 227 IPAIKGKWPLDDN--QIVIQQDNARSHISANDPDFISVAQSGGFYITLANQPANSPDLNI 54
           +PAIK KWP ++    I IQQDNA++HI+ +DP F+SVAQ  G+ I L  QP NSPDLN+
Sbjct: 321 LPAIKHKWPNEERGLPIFIQQDNAKTHIAVDDPAFLSVAQEDGWDIRLTCQPPNSPDLNV 380

Query: 53  NDLGFFRIIQGL 18
            DLGFF  +Q L
Sbjct: 381 LDLGFFAALQSL 392


>gb|AAP06879.1| unknown protein [Oryza sativa Japonica Group]
           gi|108707355|gb|ABF95150.1| transposon protein,
           putative, Mariner sub-class [Oryza sativa Japonica
           Group]
          Length = 519

 Score =  154 bits (388), Expect = 9e-36
 Identities = 75/132 (56%), Positives = 99/132 (75%), Gaps = 2/132 (1%)
 Frame = -3

Query: 407 RPRYDIDGVCTFDGKIGIFPFTIEEAAVRASKNRARGVMEVKPIKSITKLVVKKCLLEKI 228
           RPR+D  G CTFDGKIGIFPFT  EAA R+S++R RG ME+K + S+T+ +++  L+EK+
Sbjct: 301 RPRFDEYGECTFDGKIGIFPFTYWEAAKRSSRSRERGTMELKAMTSVTRDIIRNYLIEKV 360

Query: 227 IPAIKGKWPLDDN--QIVIQQDNARSHISANDPDFISVAQSGGFYITLANQPANSPDLNI 54
           +PAIK KWP ++    I IQQDNA++HI+ +DP F+SVAQ  G+ I L  QP NSPDLN+
Sbjct: 361 LPAIKHKWPNEERGLPIFIQQDNAKTHIAVDDPAFLSVAQEDGWDIRLTCQPPNSPDLNV 420

Query: 53  NDLGFFRIIQGL 18
            DLGFF  +Q L
Sbjct: 421 LDLGFFAALQSL 432


>emb|CAH67262.1| OSIGBa0101C23.14 [Oryza sativa Indica Group]
          Length = 338

 Score =  152 bits (385), Expect = 2e-35
 Identities = 74/132 (56%), Positives = 99/132 (75%), Gaps = 2/132 (1%)
 Frame = -3

Query: 407 RPRYDIDGVCTFDGKIGIFPFTIEEAAVRASKNRARGVMEVKPIKSITKLVVKKCLLEKI 228
           RPR+D  G CTFDGKIGIFPFT  EAA R+S++R RG ME+K + ++T+ +++  L+EK+
Sbjct: 120 RPRFDEYGECTFDGKIGIFPFTYWEAAKRSSRSRERGTMELKAMTTVTRDIIRNYLIEKV 179

Query: 227 IPAIKGKWPLDDN--QIVIQQDNARSHISANDPDFISVAQSGGFYITLANQPANSPDLNI 54
           +PAIK KWP ++    I IQQDNA++HI+ +DP F+SVAQ  G+ I L  QP NSPDLN+
Sbjct: 180 LPAIKHKWPNEERGLPIFIQQDNAKTHIAVDDPAFLSVAQEDGWDIRLTCQPPNSPDLNV 239

Query: 53  NDLGFFRIIQGL 18
            DLGFF  +Q L
Sbjct: 240 LDLGFFAALQSL 251


>gb|ABA91962.1| transposon protein, putative, Mariner sub-class [Oryza sativa
           Japonica Group]
          Length = 670

 Score =  150 bits (380), Expect = 8e-35
 Identities = 74/137 (54%), Positives = 96/137 (70%), Gaps = 2/137 (1%)
 Frame = -3

Query: 407 RPRYDIDGVCTFDGKIGIFPFTIEEAAVRASKNRARGVMEVKPIKSITKLVVKKCLLEKI 228
           RPR+D +G C FDGKIG FPF    AA R+S NR  G +E+KPI+SITK V++  ++EK+
Sbjct: 431 RPRFDSNGNCIFDGKIGCFPFVTYTAAKRSSVNRPAGTIEMKPIESITKEVIRSFMIEKV 490

Query: 227 IPAIKGKWPLDD--NQIVIQQDNARSHISANDPDFISVAQSGGFYITLANQPANSPDLNI 54
           +PA++ KWP +D    I IQQDNAR HI+ +D  F   A+  GF I L  QPANSPDLN+
Sbjct: 491 LPAVRAKWPREDAGKPIYIQQDNARPHIAPDDRMFCEAAKQDGFNIKLVCQPANSPDLNV 550

Query: 53  NDLGFFRIIQGLQHEKA 3
            DLGFF  IQ +Q++ A
Sbjct: 551 LDLGFFNSIQSIQYKSA 567


>gb|ACV32570.1| mar1 transposase [synthetic construct]
          Length = 576

 Score =  150 bits (380), Expect = 8e-35
 Identities = 74/137 (54%), Positives = 96/137 (70%), Gaps = 2/137 (1%)
 Frame = -3

Query: 407 RPRYDIDGVCTFDGKIGIFPFTIEEAAVRASKNRARGVMEVKPIKSITKLVVKKCLLEKI 228
           RPR+D +G C FDGKIG FPF    AA R+S NR  G +E+KPI+SITK V++  ++EK+
Sbjct: 359 RPRFDSNGNCIFDGKIGCFPFVTYTAAKRSSVNRPAGTIEMKPIESITKEVIRSFMIEKV 418

Query: 227 IPAIKGKWPLDD--NQIVIQQDNARSHISANDPDFISVAQSGGFYITLANQPANSPDLNI 54
           +PA++ KWP +D    I IQQDNAR HI+ +D  F   A+  GF I L  QPANSPDLN+
Sbjct: 419 LPAVRAKWPREDAGKPIYIQQDNARPHIAPDDRMFCEAAKQDGFNIKLVCQPANSPDLNV 478

Query: 53  NDLGFFRIIQGLQHEKA 3
            DLGFF  IQ +Q++ A
Sbjct: 479 LDLGFFNSIQSIQYKSA 495


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