BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035764
         (1004 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265876.1| PREDICTED: pentatricopeptide repeat-containi...   375   e-101
ref|XP_002511816.1| pentatricopeptide repeat-containing protein,...   367   2e-99
ref|XP_002331436.1| predicted protein [Populus trichocarpa] gi|2...   355   7e-96
ref|XP_004152890.1| PREDICTED: pentatricopeptide repeat-containi...   352   1e-94
emb|CAN79718.1| hypothetical protein VITISV_012741 [Vitis vinifera]   339   5e-91

>ref|XP_002265876.1| PREDICTED: pentatricopeptide repeat-containing protein At3g42630
           [Vitis vinifera] gi|297736023|emb|CBI24061.3| unnamed
           protein product [Vitis vinifera]
          Length = 423

 Score =  375 bits (962), Expect = e-101
 Identities = 179/288 (62%), Positives = 221/288 (76%)
 Frame = +1

Query: 1   GRAGLFNKVTELLHQVSYKNPKLLSETYAIAISCFGKAGQLNLMERTMKNMILKGFKVDS 180
           G+ G F +VT +LHQVS ++   + E Y++AISCFGK GQL +ME  +K M+ +GF VDS
Sbjct: 136 GKMGHFGEVTRILHQVSSRDFNFMHEVYSLAISCFGKGGQLEMMENALKEMVSRGFPVDS 195

Query: 181 KTGNAVLVYYSTYGSLTEMEDAYGRLKRSRILIEKEAVRAISYAYIKGNKFYNLGEFIRD 360
            TGNA + YYS +GSLTEME AY RLK+SRILIE+E +RA+S+AYIK  K+Y LG+F+RD
Sbjct: 196 ATGNAFIRYYSIFGSLTEMEAAYDRLKKSRILIEEEGIRAMSFAYIKEKKYYRLGQFLRD 255

Query: 361 XXXXXXXXXXXXXXXXXXSYAANFKMKSMQREFSRMIEYGFSPDITTFNIRALAFSKMSL 540
                             SYAANFKMKS+QREF  M+E GF+PD+TTFNIRALAFS+MSL
Sbjct: 256 VGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLEMVEAGFAPDLTTFNIRALAFSRMSL 315

Query: 541 FWDLHVTLEHMKHYAIIPDLVTYGSVVDAYLDRRLGRNLEFPLSNMRTEDAPAVSTDNIV 720
           FWDLH++LEHM+H  ++ DLVTYG VVDAYLDRRLG+NL+F L  M  +D+P VSTD+ V
Sbjct: 316 FWDLHLSLEHMQHVKVVADLVTYGCVVDAYLDRRLGKNLDFALKKMNMDDSPLVSTDHFV 375

Query: 721 FEVLGKGDFHTSSEVLLEFNRHKYWTYKGLIKTYLKKQYRSNQVFWNY 864
           FEVLGKGDFH+SSE  LE  R+  WTY+ LI TYLKK+YRSNQ+FWNY
Sbjct: 376 FEVLGKGDFHSSSEAFLESKRNGKWTYRKLIATYLKKKYRSNQIFWNY 423


>ref|XP_002511816.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548996|gb|EEF50485.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 427

 Score =  367 bits (943), Expect = 2e-99
 Identities = 173/287 (60%), Positives = 215/287 (74%)
 Frame = +1

Query: 4    RAGLFNKVTELLHQVSYKNPKLLSETYAIAISCFGKAGQLNLMERTMKNMILKGFKVDSK 183
            + G FN+V  +L Q+SY N  LL E Y++AISCFGK GQL LME  +K+M+L+GF VD  
Sbjct: 141  KKGHFNEVMNILDQLSYSNFSLLHEAYSLAISCFGKGGQLQLMENALKDMVLRGFPVDYA 200

Query: 184  TGNAVLVYYSTYGSLTEMEDAYGRLKRSRILIEKEAVRAISYAYIKGNKFYNLGEFIRDX 363
            TGNA + YYS +GSLT+ME AY RLKRSR L+++E +RA+S AY+K  KFY LGEF+RD 
Sbjct: 201  TGNAFIRYYSIHGSLTDMESAYSRLKRSRHLVDREGIRAVSLAYVKERKFYRLGEFLRDV 260

Query: 364  XXXXXXXXXXXXXXXXXSYAANFKMKSMQREFSRMIEYGFSPDITTFNIRALAFSKMSLF 543
                             S+AANFKMKS+QREF RM+E GF PD+TTFNIRALAFS+MSL 
Sbjct: 261  GLGRKDVGNLIWNFLLLSFAANFKMKSLQREFLRMLEAGFHPDVTTFNIRALAFSRMSLL 320

Query: 544  WDLHVTLEHMKHYAIIPDLVTYGSVVDAYLDRRLGRNLEFPLSNMRTEDAPAVSTDNIVF 723
            WDLH+TLEHMKH  + PD+VTYG +VDAYLDRRLG+NL+F +  M  + +P + TD  VF
Sbjct: 321  WDLHLTLEHMKHEKVSPDIVTYGCIVDAYLDRRLGKNLDFAIKKMNLDGSPVLLTDPFVF 380

Query: 724  EVLGKGDFHTSSEVLLEFNRHKYWTYKGLIKTYLKKQYRSNQVFWNY 864
            EVLGKGDFH+S+E  LEF R + WTY+ L+  YL+KQYRSNQ+FWNY
Sbjct: 381  EVLGKGDFHSSAEAFLEFKRQRKWTYRELVSIYLRKQYRSNQIFWNY 427


>ref|XP_002331436.1| predicted protein [Populus trichocarpa] gi|222873650|gb|EEF10781.1|
            predicted protein [Populus trichocarpa]
          Length = 428

 Score =  355 bits (912), Expect = 7e-96
 Identities = 174/288 (60%), Positives = 215/288 (74%), Gaps = 1/288 (0%)
 Frame = +1

Query: 4    RAGLFNKVTELLHQVS-YKNPKLLSETYAIAISCFGKAGQLNLMERTMKNMILKGFKVDS 180
            ++GLF++V ++L Q+S  +    L + Y++AISCFGK GQL LME T+K M+ KGF VDS
Sbjct: 141  KSGLFDEVIKILDQLSSLRTFDFLPQVYSLAISCFGKGGQLELMEDTLKKMVSKGFWVDS 200

Query: 181  KTGNAVLVYYSTYGSLTEMEDAYGRLKRSRILIEKEAVRAISYAYIKGNKFYNLGEFIRD 360
             TGNA +VYYS +GSL EME AY RLKRSR+LIE+E +RA+S+AYIK  KFY L EF+RD
Sbjct: 201  ATGNAFVVYYSLHGSLAEMEAAYDRLKRSRLLIEREGIRAMSFAYIKERKFYGLSEFLRD 260

Query: 361  XXXXXXXXXXXXXXXXXXSYAANFKMKSMQREFSRMIEYGFSPDITTFNIRALAFSKMSL 540
                              SY+ANFKMK++QREF  M+E GF PD+TTFNIRALAFS+MSL
Sbjct: 261  VGLGRKNLGNLIWNLLLLSYSANFKMKTLQREFLNMLEAGFHPDLTTFNIRALAFSRMSL 320

Query: 541  FWDLHVTLEHMKHYAIIPDLVTYGSVVDAYLDRRLGRNLEFPLSNMRTEDAPAVSTDNIV 720
             WDLH+ LEHMKH  + PDLVTYG +VDAYLDRRL RNLEF LS M  +++P +STD  V
Sbjct: 321  LWDLHLGLEHMKHDKVAPDLVTYGCIVDAYLDRRLVRNLEFALSKMHVDNSPVLSTDPFV 380

Query: 721  FEVLGKGDFHTSSEVLLEFNRHKYWTYKGLIKTYLKKQYRSNQVFWNY 864
            FEV GKGDFH+SSE  +EF R + WTY+ LIK YL+KQ+RS  +FWNY
Sbjct: 381  FEVFGKGDFHSSSEAFMEFKRQRKWTYRELIKIYLRKQHRSKHIFWNY 428


>ref|XP_004152890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g42630-like [Cucumis sativus]
           gi|449507537|ref|XP_004163059.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g42630-like [Cucumis sativus]
          Length = 388

 Score =  352 bits (902), Expect = 1e-94
 Identities = 170/288 (59%), Positives = 210/288 (72%)
 Frame = +1

Query: 1   GRAGLFNKVTELLHQVSYKNPKLLSETYAIAISCFGKAGQLNLMERTMKNMILKGFKVDS 180
           G+ G F+ +T++L QV  +   LL E Y++AISCFGK  QL LME T++ M+  GF V+S
Sbjct: 101 GKMGHFDYITKVLDQVKLRYSHLLPEAYSLAISCFGKHKQLELMESTLREMVSSGFTVNS 160

Query: 181 KTGNAVLVYYSTYGSLTEMEDAYGRLKRSRILIEKEAVRAISYAYIKGNKFYNLGEFIRD 360
            TGN+ ++YYS +GSL EME AYGRLKRSR LIEK+ + A+++AYI+  KFY LGEF+RD
Sbjct: 161 ATGNSFIIYYSMFGSLVEMETAYGRLKRSRFLIEKKGIMAMAFAYIRKRKFYRLGEFLRD 220

Query: 361 XXXXXXXXXXXXXXXXXXSYAANFKMKSMQREFSRMIEYGFSPDITTFNIRALAFSKMSL 540
                             SYAANFKMKS+QREF +M++ GF+PD+TTFNIRALAFS+M L
Sbjct: 221 VGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLQMVDAGFNPDLTTFNIRALAFSRMDL 280

Query: 541 FWDLHVTLEHMKHYAIIPDLVTYGSVVDAYLDRRLGRNLEFPLSNMRTEDAPAVSTDNIV 720
            WDLH++LEHMKH  I PDLVTYG VVDAY+DRRLGRNLEF LS M  +  P   TD+ V
Sbjct: 281 LWDLHLSLEHMKHMNIEPDLVTYGCVVDAYVDRRLGRNLEFILSKMNPDQPPVSLTDSFV 340

Query: 721 FEVLGKGDFHTSSEVLLEFNRHKYWTYKGLIKTYLKKQYRSNQVFWNY 864
           FE LGKGDFH SSE  ++F + K WTY+ LI  YLKK +R NQVFWNY
Sbjct: 341 FEALGKGDFHMSSEAFMQFRKQKKWTYRELISLYLKKHHRRNQVFWNY 388


>emb|CAN79718.1| hypothetical protein VITISV_012741 [Vitis vinifera]
          Length = 446

 Score =  339 bits (870), Expect = 5e-91
 Identities = 168/288 (58%), Positives = 205/288 (71%)
 Frame = +1

Query: 1   GRAGLFNKVTELLHQVSYKNPKLLSETYAIAISCFGKAGQLNLMERTMKNMILKGFKVDS 180
           G+ G F +VT +LHQ                       GQL +ME  +K M+ +GF VDS
Sbjct: 181 GKMGHFGEVTRILHQ----------------------GGQLEMMENALKEMVSRGFPVDS 218

Query: 181 KTGNAVLVYYSTYGSLTEMEDAYGRLKRSRILIEKEAVRAISYAYIKGNKFYNLGEFIRD 360
            TGNA + YYS +GSLTEME AY RLK+SRILIE+E +RA+S+AYIK  K+Y LG+F+RD
Sbjct: 219 ATGNAFIRYYSIFGSLTEMEAAYDRLKKSRILIEEEGIRAMSFAYIKEKKYYRLGQFLRD 278

Query: 361 XXXXXXXXXXXXXXXXXXSYAANFKMKSMQREFSRMIEYGFSPDITTFNIRALAFSKMSL 540
                             SYAANFKMKS+QREF  M+E GF+PD+TTFNIRALAFS+MSL
Sbjct: 279 VGLGRKNVGNLLWNLLLLSYAANFKMKSLQREFLEMVEAGFAPDLTTFNIRALAFSRMSL 338

Query: 541 FWDLHVTLEHMKHYAIIPDLVTYGSVVDAYLDRRLGRNLEFPLSNMRTEDAPAVSTDNIV 720
           FWDLH++LEHM+H  ++ DLVTYG VVDAYLDRRLG+NL+F L  M  +D+P VSTD+ V
Sbjct: 339 FWDLHLSLEHMQHVKVVADLVTYGCVVDAYLDRRLGKNLDFALKKMNMDDSPLVSTDHFV 398

Query: 721 FEVLGKGDFHTSSEVLLEFNRHKYWTYKGLIKTYLKKQYRSNQVFWNY 864
           FEVLGKGDFH+SSE  LE  R+  WTY+ LI TYLKK+YRSNQ+FWNY
Sbjct: 399 FEVLGKGDFHSSSEAFLESKRNGKWTYRKLIATYLKKKYRSNQIFWNY 446