BLASTX nr result

ID: Cnidium21_contig00035745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035745
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_850576.1| enhancer of mRNA-decapping protein 4 [Arabidops...    88   6e-16
ref|NP_187938.2| enhancer of mRNA-decapping protein 4 [Arabidops...    88   6e-16
ref|XP_002882815.1| hypothetical protein ARALYDRAFT_341449 [Arab...    88   6e-16
gb|AAM91544.1| unknown protein [Arabidopsis thaliana]                  88   6e-16
ref|XP_002882814.1| predicted protein [Arabidopsis lyrata subsp....    86   2e-15

>ref|NP_850576.1| enhancer of mRNA-decapping protein 4 [Arabidopsis thaliana]
           gi|332641810|gb|AEE75331.1| enhancer of mRNA-decapping
           protein 4 [Arabidopsis thaliana]
          Length = 1309

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 39/87 (44%), Positives = 59/87 (67%)
 Frame = +3

Query: 42  VTDMVFFSDDVDLLASISSDGLLYVWRIMEGNNKEQSQEINVCQVMAVKVKGESETVHSL 221
           VTDM FF++DVD+LAS+S DG ++VW+I EG+  E   +I    V+A+++ GE +T H  
Sbjct: 205 VTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQITGKIVLALQILGEEDTKHPR 264

Query: 222 VSWNCRKENALAIGIGRSILRFNIEKV 302
           V W+C K+  L + IG+ +LR +  KV
Sbjct: 265 VCWHCHKQEILVVSIGKHVLRIDTTKV 291


>ref|NP_187938.2| enhancer of mRNA-decapping protein 4 [Arabidopsis thaliana]
           gi|75335476|sp|Q9LTT8.1|VCS_ARATH RecName: Full=Enhancer
           of mRNA-decapping protein 4; AltName: Full=Protein
           VARICOSE gi|9294536|dbj|BAB02799.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332641809|gb|AEE75330.1| enhancer of mRNA-decapping
           protein 4 [Arabidopsis thaliana]
          Length = 1344

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 39/87 (44%), Positives = 59/87 (67%)
 Frame = +3

Query: 42  VTDMVFFSDDVDLLASISSDGLLYVWRIMEGNNKEQSQEINVCQVMAVKVKGESETVHSL 221
           VTDM FF++DVD+LAS+S DG ++VW+I EG+  E   +I    V+A+++ GE +T H  
Sbjct: 240 VTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQITGKIVLALQILGEEDTKHPR 299

Query: 222 VSWNCRKENALAIGIGRSILRFNIEKV 302
           V W+C K+  L + IG+ +LR +  KV
Sbjct: 300 VCWHCHKQEILVVSIGKHVLRIDTTKV 326


>ref|XP_002882815.1| hypothetical protein ARALYDRAFT_341449 [Arabidopsis lyrata subsp.
           lyrata] gi|297328655|gb|EFH59074.1| hypothetical protein
           ARALYDRAFT_341449 [Arabidopsis lyrata subsp. lyrata]
          Length = 1359

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 39/87 (44%), Positives = 59/87 (67%)
 Frame = +3

Query: 42  VTDMVFFSDDVDLLASISSDGLLYVWRIMEGNNKEQSQEINVCQVMAVKVKGESETVHSL 221
           VTDM FF++DVD+LAS+S DG ++VW+I EG+  E   +I    V+A+++ GE +T H  
Sbjct: 239 VTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQITGKIVLALQILGEEDTKHPR 298

Query: 222 VSWNCRKENALAIGIGRSILRFNIEKV 302
           V W+C K+  L + IG+ +LR +  KV
Sbjct: 299 VCWHCHKQEILVVSIGKHVLRIDTTKV 325


>gb|AAM91544.1| unknown protein [Arabidopsis thaliana]
          Length = 1344

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 39/87 (44%), Positives = 59/87 (67%)
 Frame = +3

Query: 42  VTDMVFFSDDVDLLASISSDGLLYVWRIMEGNNKEQSQEINVCQVMAVKVKGESETVHSL 221
           VTDM FF++DVD+LAS+S DG ++VW+I EG+  E   +I    V+A+++ GE +T H  
Sbjct: 240 VTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQITGKIVLALQILGEEDTKHPR 299

Query: 222 VSWNCRKENALAIGIGRSILRFNIEKV 302
           V W+C K+  L + IG+ +LR +  KV
Sbjct: 300 VCWHCHKQEILVVSIGKHVLRIDTTKV 326


>ref|XP_002882814.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328654|gb|EFH59073.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1099

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 39/87 (44%), Positives = 58/87 (66%)
 Frame = +3

Query: 42  VTDMVFFSDDVDLLASISSDGLLYVWRIMEGNNKEQSQEINVCQVMAVKVKGESETVHSL 221
           VTDM FF++DV LLAS+S DG ++VW+I EG+  +   EI    V+A+++ GE +T H  
Sbjct: 230 VTDMAFFAEDVHLLASVSLDGKVFVWKISEGSEGDDQPEITGKIVLALQILGEEDTKHPR 289

Query: 222 VSWNCRKENALAIGIGRSILRFNIEKV 302
           V W+C K+  L + IG+ +LR +  KV
Sbjct: 290 VCWHCHKQEILVVSIGKHVLRIDTTKV 316


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