BLASTX nr result

ID: Cnidium21_contig00035737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035737
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310803.1| predicted protein [Populus trichocarpa] gi|2...    73   4e-11
ref|XP_003611990.1| hypothetical protein MTR_5g020090 [Medicago ...    67   4e-09
ref|XP_003611992.1| hypothetical protein MTR_5g020110 [Medicago ...    62   1e-07

>ref|XP_002310803.1| predicted protein [Populus trichocarpa] gi|222853706|gb|EEE91253.1|
           predicted protein [Populus trichocarpa]
          Length = 148

 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 48/124 (38%), Positives = 69/124 (55%), Gaps = 9/124 (7%)
 Frame = -2

Query: 601 MKMISRSMRLERGSSLSNRLERTNSYLVASEYISP---RITSYEKLSKSSRFPEETRSSY 431
           M+++ RS R+ERGSS+  +  R+NS L+ SE IS    R+  YE LS S R   +    Y
Sbjct: 1   MELVCRSFRVERGSSI--KFGRSNSSLLISESISSECTRVARYENLSASMRMSNDQDIGY 58

Query: 430 NHDHQRRGNKSGWSFLSKVFSSFRK------TDARAHPTVKPSQSALQQKSCWLPDPQQR 269
                R      ++F+SKVFS FRK      T  +A    +  +   +++S WLPDP++R
Sbjct: 59  RSRKSR-----AYTFISKVFS-FRKISSDCETRQQADMVTQEEKKEKKKRSSWLPDPERR 112

Query: 268 WPVQ 257
           WPVQ
Sbjct: 113 WPVQ 116


>ref|XP_003611990.1| hypothetical protein MTR_5g020090 [Medicago truncatula]
           gi|355513325|gb|AES94948.1| hypothetical protein
           MTR_5g020090 [Medicago truncatula]
          Length = 102

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 4/105 (3%)
 Frame = -2

Query: 553 SNRLERTNSYLVASEYISP---RITSYEKLSKSSRFPEETRSSYNHDHQRRGNKSGWSFL 383
           S RL R+   L++SE I+    +I+ YE+LS+S R  EE        ++ + NK G  F+
Sbjct: 6   SFRLSRSERILLSSESITSECAKISGYERLSQSMRLSEE--------YEHKKNKRGIGFI 57

Query: 382 SKVFSSFR-KTDARAHPTVKPSQSALQQKSCWLPDPQQRWPVQGW 251
           +KV S  R  T    +  V+ +    +++S WLPDP  RWP+QGW
Sbjct: 58  TKVLSFRRISTPHEGNVAVELAAKKEKKRSSWLPDPNNRWPIQGW 102


>ref|XP_003611992.1| hypothetical protein MTR_5g020110 [Medicago truncatula]
           gi|355513327|gb|AES94950.1| hypothetical protein
           MTR_5g020110 [Medicago truncatula]
          Length = 96

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 3/104 (2%)
 Frame = -2

Query: 553 SNRLERTNSYLVASEYISP---RITSYEKLSKSSRFPEETRSSYNHDHQRRGNKSGWSFL 383
           S RL R+   L++SE ++    ++  YE+LS++    EE        ++ + NK G  FL
Sbjct: 6   SVRLSRSEGILLSSESVTSECAKVGGYERLSQTMEINEE--------YEHKKNKRGIGFL 57

Query: 382 SKVFSSFRKTDARAHPTVKPSQSALQQKSCWLPDPQQRWPVQGW 251
           +KV +  R +        + ++   +++S WLPDPQ+RWPVQGW
Sbjct: 58  NKVLNLTRISSPH-----EAAEKKEKKRSSWLPDPQKRWPVQGW 96


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