BLASTX nr result

ID: Cnidium21_contig00035696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035696
         (431 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270341.1| PREDICTED: probable plastid-lipid-associated...    78   9e-13
ref|XP_002880273.1| plastid-lipid associated protein pap [Arabid...    70   2e-10
ref|XP_002515135.1| structural molecule, putative [Ricinus commu...    70   2e-10
gb|ABD39695.1| fibrillin 8 [Coffea canephora]                          70   2e-10
ref|NP_566091.1| putative plastid-lipid-associated protein 10 [A...    69   3e-10

>ref|XP_002270341.1| PREDICTED: probable plastid-lipid-associated protein 10,
           chloroplastic [Vitis vinifera]
           gi|296089046|emb|CBI38749.3| unnamed protein product
           [Vitis vinifera]
          Length = 278

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 46/114 (40%), Positives = 66/114 (57%)
 Frame = +1

Query: 88  MRICITSWLDLQPLVNGKGRSGGDVLYLPTSRRRSFSKVMYEKPSMNSRSSISNTTNEVE 267
           M +   S L L P     G     V   P + R   ++ M+  P + + ++ +    E  
Sbjct: 1   MNLAFASTLHL-PTGQRVGYDTRSVSLAPNASRGLSTQKMF--PCLAATATPTTQAAEFV 57

Query: 268 TETRKHELLKAIQDTQRGISATPHKRSCIEEALVSLETLDAGFPLDLDMLNGTW 429
            E +KH+LL+AIQDTQRG+ AT  +RSCIEEALV++E  +AG P+DL  L+GTW
Sbjct: 58  LEEKKHDLLRAIQDTQRGLVATADQRSCIEEALVNVEEYNAGVPIDLGKLDGTW 111


>ref|XP_002880273.1| plastid-lipid associated protein pap [Arabidopsis lyrata subsp.
           lyrata] gi|297326112|gb|EFH56532.1| plastid-lipid
           associated protein pap [Arabidopsis lyrata subsp.
           lyrata]
          Length = 283

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/58 (55%), Positives = 46/58 (79%)
 Frame = +1

Query: 256 NEVETETRKHELLKAIQDTQRGISATPHKRSCIEEALVSLETLDAGFPLDLDMLNGTW 429
           NE++ E +KH+LL+A+QDTQRG++AT  +RS IEEALV++E  + G  +DL  L+GTW
Sbjct: 55  NELDLEHKKHDLLRAVQDTQRGLTATSDQRSIIEEALVTVEGFNGGEEIDLVKLDGTW 112


>ref|XP_002515135.1| structural molecule, putative [Ricinus communis]
           gi|223545615|gb|EEF47119.1| structural molecule,
           putative [Ricinus communis]
          Length = 285

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 34/58 (58%), Positives = 44/58 (75%)
 Frame = +1

Query: 256 NEVETETRKHELLKAIQDTQRGISATPHKRSCIEEALVSLETLDAGFPLDLDMLNGTW 429
           +E E E +KH++L AIQDTQRG+ AT  +RS IE+ALVSLE  + G P+DL  L+GTW
Sbjct: 56  SEFEIEKKKHDVLTAIQDTQRGLVATADQRSIIEDALVSLEGYNVGAPIDLVKLDGTW 113


>gb|ABD39695.1| fibrillin 8 [Coffea canephora]
          Length = 279

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 34/57 (59%), Positives = 42/57 (73%)
 Frame = +1

Query: 259 EVETETRKHELLKAIQDTQRGISATPHKRSCIEEALVSLETLDAGFPLDLDMLNGTW 429
           E E E +K+ELL+ IQDTQRG+  T  +RS IEEALVS+E  DAG  +DL  L+GTW
Sbjct: 54  ETELEDKKYELLRVIQDTQRGLVTTADQRSSIEEALVSVEAFDAGEAIDLGELDGTW 110


>ref|NP_566091.1| putative plastid-lipid-associated protein 10 [Arabidopsis thaliana]
           gi|75162466|sp|Q8W4F1.1|PAP10_ARATH RecName:
           Full=Probable plastid-lipid-associated protein 10,
           chloroplastic; AltName: Full=Fibrillin-10; Flags:
           Precursor gi|17065042|gb|AAL32675.1| Unknown protein
           [Arabidopsis thaliana] gi|20197139|gb|AAC34229.2|
           Expressed protein [Arabidopsis thaliana]
           gi|20259994|gb|AAM13344.1| unknown protein [Arabidopsis
           thaliana] gi|330255676|gb|AEC10770.1| putative
           plastid-lipid-associated protein 10 [Arabidopsis
           thaliana]
          Length = 284

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/90 (42%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
 Frame = +1

Query: 163 LYLPTSRRRSFS-KVMYEKPSMNSRSSISNTTNEVETETRKHELLKAIQDTQRGISATPH 339
           L + T+ R+ FS +V       ++R  + N   E++ E +KH+LL+A+QDTQRG++AT  
Sbjct: 27  LNIKTNHRKRFSCRVAVASGETSARVVVDN---ELDLEHKKHDLLRAVQDTQRGLTATSD 83

Query: 340 KRSCIEEALVSLETLDAGFPLDLDMLNGTW 429
           +RS IEEALV++E  + G  +D   L+GTW
Sbjct: 84  QRSIIEEALVTVEGFNGGEEIDPVKLDGTW 113


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