BLASTX nr result
ID: Cnidium21_contig00035693
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00035693
(610 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002318819.1| predicted protein [Populus trichocarpa] gi|2... 315 5e-84
ref|XP_002267709.1| PREDICTED: E3 ubiquitin-protein ligase COP1-... 309 3e-82
ref|XP_002267663.1| PREDICTED: E3 ubiquitin-protein ligase COP1-... 304 9e-81
ref|XP_002321910.1| predicted protein [Populus trichocarpa] gi|2... 302 4e-80
ref|XP_002528808.1| ubiquitin ligase protein cop1, putative [Ric... 299 3e-79
>ref|XP_002318819.1| predicted protein [Populus trichocarpa] gi|222859492|gb|EEE97039.1|
predicted protein [Populus trichocarpa]
Length = 239
Score = 315 bits (806), Expect = 5e-84
Identities = 139/203 (68%), Positives = 166/203 (81%)
Frame = +2
Query: 2 RKIPVFERDEHGGRRVWSIDYSHWNPIIGASGSDDGSMQVWDPRCEGGNCVAKVHPSVTR 181
R+IP+FERDEHGGRRVWS+DYSHW+P++GASGSDDG+MQ+WD RCE G VA V P V R
Sbjct: 7 RRIPIFERDEHGGRRVWSVDYSHWDPVLGASGSDDGTMQMWDTRCESGEGVATVQPGVGR 66
Query: 182 SPVCCVEFNPFGGSTIVVGCADHKIYGYDIRMMSHPVMMLQGHDKTVTYARFMDHHTVVT 361
S VCCVEFNPFGG + VGCAD ++YGYDIRM PV +L GH KTVTY +F+D+ T+V+
Sbjct: 67 SAVCCVEFNPFGGPIVAVGCADRRVYGYDIRMTGDPVFVLDGHRKTVTYIKFLDNVTLVS 126
Query: 362 SGTDGCLKMWDTDEPSRLVRTYKGHVNCRRFIGLSVWRSGGLICCGSENNQVFVYDRRWG 541
+ DGCLK+WD+D S ++R+YKGHVN R FIGLSVWR+GGL+ CGSENN+VFVYDRRWG
Sbjct: 127 ASIDGCLKLWDSDN-SNVIRSYKGHVNSRSFIGLSVWRNGGLLGCGSENNKVFVYDRRWG 185
Query: 542 EPIWVHEPESMSCDGGTDGFVSS 610
EPIWVHE + DG GFVSS
Sbjct: 186 EPIWVHESNPVGRDGCGGGFVSS 208
>ref|XP_002267709.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
Length = 383
Score = 309 bits (791), Expect = 3e-82
Identities = 137/203 (67%), Positives = 162/203 (79%)
Frame = +2
Query: 2 RKIPVFERDEHGGRRVWSIDYSHWNPIIGASGSDDGSMQVWDPRCEGGNCVAKVHPSVTR 181
+KIP+FERDEHGGRR+WS+DYSHW+P +GASGSDDG+MQ+WDPRCEG VAKV PS
Sbjct: 149 QKIPIFERDEHGGRRIWSVDYSHWDPFVGASGSDDGTMQMWDPRCEGIKNVAKVRPSGGG 208
Query: 182 SPVCCVEFNPFGGSTIVVGCADHKIYGYDIRMMSHPVMMLQGHDKTVTYARFMDHHTVVT 361
S VCCVEFNPFGG I VGCAD + YGYD+R M PV++ GH KTVTY RF+D HT+VT
Sbjct: 209 SAVCCVEFNPFGGPLIAVGCADRRAYGYDVRKMVDPVLIFDGHQKTVTYVRFLDQHTMVT 268
Query: 362 SGTDGCLKMWDTDEPSRLVRTYKGHVNCRRFIGLSVWRSGGLICCGSENNQVFVYDRRWG 541
SGTDGCL++W + +R++R Y GH+N R F+GLSVWR+GGL+ CGSENN VFVYD+RWG
Sbjct: 269 SGTDGCLRLWSMHD-ARMIRVYMGHMNTRSFVGLSVWRTGGLLGCGSENNHVFVYDKRWG 327
Query: 542 EPIWVHEPESMSCDGGTDGFVSS 610
EPIWVHE S DG FVSS
Sbjct: 328 EPIWVHEFGVGSRDGRDPNFVSS 350
>ref|XP_002267663.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
Length = 382
Score = 304 bits (778), Expect = 9e-81
Identities = 133/203 (65%), Positives = 158/203 (77%)
Frame = +2
Query: 2 RKIPVFERDEHGGRRVWSIDYSHWNPIIGASGSDDGSMQVWDPRCEGGNCVAKVHPSVTR 181
RKIP+FERDEHGGRR+WS+DYSHWNP +GASGSDDG++Q+WDPRCEG VAKV PS
Sbjct: 149 RKIPIFERDEHGGRRIWSVDYSHWNPFVGASGSDDGTIQMWDPRCEGTTNVAKVRPSAGG 208
Query: 182 SPVCCVEFNPFGGSTIVVGCADHKIYGYDIRMMSHPVMMLQGHDKTVTYARFMDHHTVVT 361
VCCVEFNPFGG + VGCAD + YGYD+R M PV++ GH K VTY RF+D H +VT
Sbjct: 209 GAVCCVEFNPFGGPLVAVGCADRRAYGYDVRKMVDPVLIFDGHQKPVTYVRFLDEHMMVT 268
Query: 362 SGTDGCLKMWDTDEPSRLVRTYKGHVNCRRFIGLSVWRSGGLICCGSENNQVFVYDRRWG 541
SGTDGCL++W + +R++R Y GH+N R F+GLSVWR+GGL+ CGSENN VFVYD+RW
Sbjct: 269 SGTDGCLRLWSMHD-ARMIRVYMGHMNTRNFVGLSVWRTGGLLGCGSENNHVFVYDKRWS 327
Query: 542 EPIWVHEPESMSCDGGTDGFVSS 610
EPIWVHE S DG FVSS
Sbjct: 328 EPIWVHEFGGGSRDGCDPKFVSS 350
>ref|XP_002321910.1| predicted protein [Populus trichocarpa] gi|222868906|gb|EEF06037.1|
predicted protein [Populus trichocarpa]
Length = 244
Score = 302 bits (773), Expect = 4e-80
Identities = 135/205 (65%), Positives = 165/205 (80%), Gaps = 2/205 (0%)
Frame = +2
Query: 2 RKIPVFERDEHGGRRVWSIDYSHWNPIIGASGSDDGSMQVWDPRCEGGNCVAKVHPSVTR 181
R+IP+FERDEHGGRRVWS+DYSH +P +GASGSDDG+MQ+WD R E G CVA V PSV R
Sbjct: 7 RRIPIFERDEHGGRRVWSVDYSHCDPTMGASGSDDGTMQMWDTRSESGECVATVQPSVRR 66
Query: 182 SPVCCVEFNPFGGSTIVVGCADHKIYGYDIRMMSHPVMMLQGHDKTVTYARFMDHHTVVT 361
S VCCVEFNPFGG + +GCAD K+YGYD+RMM+ PV +L GH KTVTY +F+D+ T+V+
Sbjct: 67 SAVCCVEFNPFGGPIVAIGCADRKVYGYDLRMMADPVFVLDGHRKTVTYIKFLDNATLVS 126
Query: 362 SGTDGCLKMWDTDEPSRLVRTYKGHVNCRRFIGLSVWRSGGLICCGSENNQVFVYDRRWG 541
+ DGCLK+W++D S ++RTY GHVN R F+GLSVWR+GGL+ CGSENN+VFVYD+RW
Sbjct: 127 ASIDGCLKLWNSDN-SNVIRTYHGHVNNRNFVGLSVWRNGGLLGCGSENNKVFVYDKRWS 185
Query: 542 EPIWVHEPES--MSCDGGTDGFVSS 610
EP+WVHE S M D GFVSS
Sbjct: 186 EPVWVHESSSPIMGKDRCGSGFVSS 210
>ref|XP_002528808.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
gi|223531761|gb|EEF33581.1| ubiquitin ligase protein
cop1, putative [Ricinus communis]
Length = 426
Score = 299 bits (765), Expect = 3e-79
Identities = 134/204 (65%), Positives = 166/204 (81%), Gaps = 2/204 (0%)
Frame = +2
Query: 5 KIPVFERDEHGGRRVWSIDYSHWNPIIGASGSDDGSMQVWDPRCEGGNCVAKVHPSVTRS 184
+IP+FERDEHGGRR+WS+DYSHW+P++GASGSDDG+MQ+WDPR EGG CVA V PSVT S
Sbjct: 192 RIPIFERDEHGGRRIWSVDYSHWSPVVGASGSDDGTMQMWDPRHEGGGCVATVKPSVTSS 251
Query: 185 --PVCCVEFNPFGGSTIVVGCADHKIYGYDIRMMSHPVMMLQGHDKTVTYARFMDHHTVV 358
VC VEFNPFGGS I VGCAD ++YGYD+RM+++PV +L GH KTVTY RFMD+ T+
Sbjct: 252 CRAVCSVEFNPFGGSIIAVGCADRRVYGYDVRMITNPVFVLDGHKKTVTYVRFMDNGTLA 311
Query: 359 TSGTDGCLKMWDTDEPSRLVRTYKGHVNCRRFIGLSVWRSGGLICCGSENNQVFVYDRRW 538
++G DGCLK+W+ + S+L+RTYKGH+N R F+GLSVWR+GGL+ CGSENNQVFVYD+RW
Sbjct: 312 SAGIDGCLKLWNLQD-SQLLRTYKGHLNSRNFVGLSVWRNGGLLGCGSENNQVFVYDKRW 370
Query: 539 GEPIWVHEPESMSCDGGTDGFVSS 610
EPIW + S GFV+S
Sbjct: 371 SEPIWAYG----SGPAADHGFVNS 390