BLASTX nr result

ID: Cnidium21_contig00035680 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035680
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004157043.1| PREDICTED: dihydroorotate dehydrogenase (qui...   119   4e-25
ref|XP_004149869.1| PREDICTED: dihydroorotate dehydrogenase (qui...   119   4e-25
emb|CBI28999.3| unnamed protein product [Vitis vinifera]              114   1e-23
ref|XP_002267743.1| PREDICTED: dihydroorotate dehydrogenase (qui...   114   1e-23
emb|CAN60140.1| hypothetical protein VITISV_024747 [Vitis vinifera]   114   1e-23

>ref|XP_004157043.1| PREDICTED: dihydroorotate dehydrogenase (quinone),
           mitochondrial-like [Cucumis sativus]
          Length = 323

 Score =  119 bits (297), Expect = 4e-25
 Identities = 65/103 (63%), Positives = 75/103 (72%), Gaps = 4/103 (3%)
 Frame = +2

Query: 245 MWARVGFKFMRQNLCE----KLNLGSRFYSAATSSFVPPVVRPKLPQSSKKGRLLTGATI 412
           M A +  K +R   C+    +L  G+R YS+A     P  +R K+P +SKKGRLLTGATI
Sbjct: 1   MAATLSRKLVRDACCKGAISRLFQGARHYSSA-----PETIR-KIPHTSKKGRLLTGATI 54

Query: 413 SLLIGGGAYASTVDEATFCGWLFSATKVVNPFFALLDPEVAHR 541
            LLI GGAY ST DEATFCGWLFSATK+VNPFFALLDPEVAHR
Sbjct: 55  GLLIAGGAYVSTADEATFCGWLFSATKLVNPFFALLDPEVAHR 97


>ref|XP_004149869.1| PREDICTED: dihydroorotate dehydrogenase (quinone),
           mitochondrial-like [Cucumis sativus]
          Length = 455

 Score =  119 bits (297), Expect = 4e-25
 Identities = 65/103 (63%), Positives = 75/103 (72%), Gaps = 4/103 (3%)
 Frame = +2

Query: 245 MWARVGFKFMRQNLCE----KLNLGSRFYSAATSSFVPPVVRPKLPQSSKKGRLLTGATI 412
           M A +  K +R   C+    +L  G+R YS+A     P  +R K+P +SKKGRLLTGATI
Sbjct: 1   MAATLSRKLVRDACCKGAISRLFQGARHYSSA-----PETIR-KIPHTSKKGRLLTGATI 54

Query: 413 SLLIGGGAYASTVDEATFCGWLFSATKVVNPFFALLDPEVAHR 541
            LLI GGAY ST DEATFCGWLFSATK+VNPFFALLDPEVAHR
Sbjct: 55  GLLIAGGAYVSTADEATFCGWLFSATKLVNPFFALLDPEVAHR 97


>emb|CBI28999.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score =  114 bits (285), Expect = 1e-23
 Identities = 64/104 (61%), Positives = 69/104 (66%), Gaps = 5/104 (4%)
 Frame = +2

Query: 245 MWARVGFKFMRQNLCEKLNLGS-----RFYSAATSSFVPPVVRPKLPQSSKKGRLLTGAT 409
           M  RV  K  R  L  K+  G       + SAA +   PP    K+P SSKKGRL TGA 
Sbjct: 1   MAVRVSSKIWRDYLYNKVKSGGFGATRHWSSAAQTPTAPPP--KKIPHSSKKGRLFTGAA 58

Query: 410 ISLLIGGGAYASTVDEATFCGWLFSATKVVNPFFALLDPEVAHR 541
           I LLI GGAY STVDEATFCGWLFSATK+VNPFFALLD EVAHR
Sbjct: 59  IGLLIAGGAYVSTVDEATFCGWLFSATKLVNPFFALLDAEVAHR 102


>ref|XP_002267743.1| PREDICTED: dihydroorotate dehydrogenase (quinone),
           mitochondrial-like [Vitis vinifera]
          Length = 460

 Score =  114 bits (285), Expect = 1e-23
 Identities = 64/104 (61%), Positives = 69/104 (66%), Gaps = 5/104 (4%)
 Frame = +2

Query: 245 MWARVGFKFMRQNLCEKLNLGS-----RFYSAATSSFVPPVVRPKLPQSSKKGRLLTGAT 409
           M  RV  K  R  L  K+  G       + SAA +   PP    K+P SSKKGRL TGA 
Sbjct: 1   MAVRVSSKIWRDYLYNKVKSGGFGATRHWSSAAQTPTAPPP--KKIPHSSKKGRLFTGAA 58

Query: 410 ISLLIGGGAYASTVDEATFCGWLFSATKVVNPFFALLDPEVAHR 541
           I LLI GGAY STVDEATFCGWLFSATK+VNPFFALLD EVAHR
Sbjct: 59  IGLLIAGGAYVSTVDEATFCGWLFSATKLVNPFFALLDAEVAHR 102


>emb|CAN60140.1| hypothetical protein VITISV_024747 [Vitis vinifera]
          Length = 310

 Score =  114 bits (285), Expect = 1e-23
 Identities = 64/104 (61%), Positives = 69/104 (66%), Gaps = 5/104 (4%)
 Frame = +2

Query: 245 MWARVGFKFMRQNLCEKLNLGS-----RFYSAATSSFVPPVVRPKLPQSSKKGRLLTGAT 409
           M  RV  K  R  L  K+  G       + SAA +   PP    K+P SSKKGRL TGA 
Sbjct: 1   MAVRVSSKIWRDYLYNKVKSGGFGATRHWSSAAQTPTAPPP--KKIPHSSKKGRLFTGAA 58

Query: 410 ISLLIGGGAYASTVDEATFCGWLFSATKVVNPFFALLDPEVAHR 541
           I LLI GGAY STVDEATFCGWLFSATK+VNPFFALLD EVAHR
Sbjct: 59  IGLLIAGGAYVSTVDEATFCGWLFSATKLVNPFFALLDAEVAHR 102


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