BLASTX nr result

ID: Cnidium21_contig00035643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035643
         (717 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517534.1| cyclin A, putative [Ricinus communis] gi|223...    86   1e-14
ref|XP_002298132.1| predicted protein [Populus trichocarpa] gi|2...    81   2e-13
ref|XP_003528372.1| PREDICTED: cyclin-A2-4-like [Glycine max]          73   5e-11
ref|XP_002304171.1| predicted protein [Populus trichocarpa] gi|2...    68   2e-09
ref|XP_002280592.1| PREDICTED: cyclin-A2-4 [Vitis vinifera] gi|2...    65   1e-08

>ref|XP_002517534.1| cyclin A, putative [Ricinus communis] gi|223543166|gb|EEF44698.1|
           cyclin A, putative [Ricinus communis]
          Length = 496

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 51/122 (41%), Positives = 76/122 (62%), Gaps = 10/122 (8%)
 Frame = -1

Query: 465 LDASKQQLQKRELRKNSKRVALEKNSCAPTNQHKRRAVLKDVTNICCDDSYRIC------ 304
           L  ++QQ QKR LR NSKR AL++N+ +  +  KRRAVL+DVTN+CC+ SYR C      
Sbjct: 35  LRETRQQGQKRILRANSKRAALDENNTSAIDNAKRRAVLRDVTNVCCESSYRSCFSAAKI 94

Query: 303 -KKNVNLIKKGSVHVSKIAPSVAV---KIQQTSKNKTVEGAALSKAETVSVEGSWSLDKN 136
             KN    KKG ++VSK+ PS A    ++Q  SK K ++ +  ++ ++  V  S +L+K+
Sbjct: 95  QAKNGKQAKKGQLNVSKVIPSRAAEPPRLQADSKIKVLQDSIKTEPKS-EVISSTTLEKD 153

Query: 135 AH 130
            H
Sbjct: 154 EH 155


>ref|XP_002298132.1| predicted protein [Populus trichocarpa] gi|222845390|gb|EEE82937.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score = 81.3 bits (199), Expect = 2e-13
 Identities = 48/99 (48%), Positives = 64/99 (64%), Gaps = 11/99 (11%)
 Frame = -1

Query: 465 LDASKQQLQKRELRKNSKRVALEKNSCAPT----NQHKRRAVLKDVTNICCDDSYRIC-- 304
           L AS +Q QKR LR N KR AL++N+ +      NQ KRRAVL+DVTN+CC++SY  C  
Sbjct: 33  LKASSKQDQKRILRANPKRAALDENNTSGPANAGNQRKRRAVLQDVTNVCCENSYTSCFS 92

Query: 303 --KKNVNLIKKGSVHVSKIAPSVAVK---IQQTSKNKTV 202
             K    + KKG + VSKIAPSVA++   ++  SK K +
Sbjct: 93  ATKIQAKIAKKGQLKVSKIAPSVALEHRHLRANSKKKII 131


>ref|XP_003528372.1| PREDICTED: cyclin-A2-4-like [Glycine max]
          Length = 482

 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 51/144 (35%), Positives = 77/144 (53%), Gaps = 12/144 (8%)
 Frame = -1

Query: 450 QQLQKRELRKNSKRVALEKNSCAPTNQHKRRAVLKDVTNICCDDSYRICKKNVN------ 289
           QQ Q +  R NSKR A+  N+C    Q KR+AVL++VTN+CC+++Y+ C  + N      
Sbjct: 41  QQNQNQLSRVNSKR-AVSDNTCV---QRKRKAVLQEVTNVCCENAYKACLNSTNIQARKS 96

Query: 288 -LIKKGSVHVSKIAPSVAVKIQQTSKNKTVEGAALSKAET---VSVEGSWSLDKNAHTKP 121
            L K G ++VSK+APSV V+ +Q   +   +  AL   +T   +++E +  L  NA+   
Sbjct: 97  KLAKAGQINVSKVAPSVTVEPRQFQVDSKAKETALQSEDTMCSINLENNELLQLNAN--- 153

Query: 120 IAVTDPLKD--IPLHDMPDAGVHP 55
               D  KD  +P   M     HP
Sbjct: 154 ----DCSKDFRLPESQMSGISAHP 173


>ref|XP_002304171.1| predicted protein [Populus trichocarpa] gi|222841603|gb|EEE79150.1|
           predicted protein [Populus trichocarpa]
          Length = 463

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 44/101 (43%), Positives = 59/101 (58%), Gaps = 13/101 (12%)
 Frame = -1

Query: 465 LDASKQQLQKRELRKNSKRVALEKNSCA----PTNQHKRRAVLKDVTNICCDDSYRICKK 298
           L A  +Q  KR LR N KR AL++NS +      NQ KRRAVL+DVTN+CC++SY  C  
Sbjct: 33  LKAPTKQDWKRNLRTNRKRAALDENSTSRPDNADNQCKRRAVLQDVTNVCCENSYTSCFS 92

Query: 297 NVNL------IKKGSVHVSKIAPSVA---VKIQQTSKNKTV 202
              +       KK  + VSK+APS A    +++ +SK K V
Sbjct: 93  ATKIQVVAKQAKKVQLDVSKVAPSSASEHPRLKASSKKKIV 133


>ref|XP_002280592.1| PREDICTED: cyclin-A2-4 [Vitis vinifera]
           gi|297743331|emb|CBI36198.3| unnamed protein product
           [Vitis vinifera]
          Length = 490

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 43/93 (46%), Positives = 54/93 (58%), Gaps = 11/93 (11%)
 Frame = -1

Query: 462 DASKQQLQKRELRKNSKRVALE-KNSCAPTN---QHKRRAVLKDVTNICCDDSYRIC--- 304
           +AS  Q QKR  + N KR ALE KN+ A      Q K+RAVLKDV NICC++ Y  C   
Sbjct: 36  NASMPQEQKRTSQSNLKRPALEEKNNAASATTAPQCKKRAVLKDVANICCENLYMNCIDA 95

Query: 303 ----KKNVNLIKKGSVHVSKIAPSVAVKIQQTS 217
               K+N    +KG V + K+APSV V+I   S
Sbjct: 96  TKIQKRNSKQARKGWVMLPKVAPSVTVEISLLS 128


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