BLASTX nr result

ID: Cnidium21_contig00035642 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035642
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514944.1| ubiquitin-protein ligase, putative [Ricinus ...   138   4e-31
ref|XP_003551504.1| PREDICTED: U-box domain-containing protein 6...   127   7e-28
ref|XP_003538560.1| PREDICTED: U-box domain-containing protein 7...   126   2e-27
ref|XP_004142936.1| PREDICTED: U-box domain-containing protein 4...   123   2e-26
ref|XP_002311720.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26

>ref|XP_002514944.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223545995|gb|EEF47498.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 774

 Score =  138 bits (348), Expect = 4e-31
 Identities = 73/131 (55%), Positives = 96/131 (73%), Gaps = 1/131 (0%)
 Frame = -3

Query: 391  GLISELASILDIGEPLEQEHAAACLLTLCDGNDKCIQMVLQEGVIPSLVSIAVNGTMRAK 212
            GLI  LA+ILD GEP+EQE AA+CL  LC+G++KC Q+VLQEGVIP+LVSI+VNGT+R K
Sbjct: 643  GLIGGLATILDTGEPIEQEQAASCLYILCNGSEKCSQLVLQEGVIPALVSISVNGTIRGK 702

Query: 211  SKCQKLLTLFREQRQK-EPKEPAQVQSRHEQSDNNEMPVXXXXXXXXXXXXXSRRVIGKN 35
             K QKLL LFREQRQ+ +P+ PA+V+ +  +S +  MP              SRR +GK 
Sbjct: 703  EKAQKLLMLFREQRQRDQPQPPAEVRFQRAESSSKAMPA---QESKPLCKSVSRRKMGKA 759

Query: 34   LSFWWKNKSFA 2
            LSF+WK+KS++
Sbjct: 760  LSFFWKSKSYS 770


>ref|XP_003551504.1| PREDICTED: U-box domain-containing protein 6-like [Glycine max]
          Length = 765

 Score =  127 bits (320), Expect = 7e-28
 Identities = 67/130 (51%), Positives = 88/130 (67%)
 Frame = -3

Query: 391  GLISELASILDIGEPLEQEHAAACLLTLCDGNDKCIQMVLQEGVIPSLVSIAVNGTMRAK 212
            GLIS LAS LD GEP+EQE AA+CLL LC+ +++C QMVLQEGVIP+LVSI+VNGT R +
Sbjct: 635  GLISALASTLDTGEPIEQEQAASCLLILCNRSEECCQMVLQEGVIPALVSISVNGTSRGR 694

Query: 211  SKCQKLLTLFREQRQKEPKEPAQVQSRHEQSDNNEMPVXXXXXXXXXXXXXSRRVIGKNL 32
             K QKLL +FREQRQ++   P ++     +S +  MP               R+V+GK  
Sbjct: 695  EKAQKLLMVFREQRQRD-HSPVKIDQPESESSDLSMP--PPDTKPLSKTISRRKVVGKAF 751

Query: 31   SFWWKNKSFA 2
            SF WK+KS++
Sbjct: 752  SFLWKSKSYS 761


>ref|XP_003538560.1| PREDICTED: U-box domain-containing protein 7-like [Glycine max]
          Length = 764

 Score =  126 bits (317), Expect = 2e-27
 Identities = 68/130 (52%), Positives = 88/130 (67%)
 Frame = -3

Query: 391  GLISELASILDIGEPLEQEHAAACLLTLCDGNDKCIQMVLQEGVIPSLVSIAVNGTMRAK 212
            GLIS LAS LD GEP+EQE AA+CLL LC+ +++C +MVLQEGVIP+LVSI+VNGT R +
Sbjct: 635  GLISALASTLDTGEPIEQEQAASCLLILCNRSEECCEMVLQEGVIPALVSISVNGTSRGR 694

Query: 211  SKCQKLLTLFREQRQKEPKEPAQVQSRHEQSDNNEMPVXXXXXXXXXXXXXSRRVIGKNL 32
             K QKLL +FREQRQ++   P +   R  +S +  MP              SRR +GK  
Sbjct: 695  EKAQKLLMVFREQRQQD-HSPVKTDQRESESSDLSMP---PPETKLLSKSISRRKVGKAF 750

Query: 31   SFWWKNKSFA 2
            SF WK+KS++
Sbjct: 751  SFLWKSKSYS 760


>ref|XP_004142936.1| PREDICTED: U-box domain-containing protein 45-like [Cucumis sativus]
            gi|449494446|ref|XP_004159548.1| PREDICTED: U-box
            domain-containing protein 45-like [Cucumis sativus]
          Length = 778

 Score =  123 bits (308), Expect = 2e-26
 Identities = 71/138 (51%), Positives = 86/138 (62%), Gaps = 9/138 (6%)
 Frame = -3

Query: 388  LISELASILDIGEPLEQEHAAACLLTLCDGNDKCIQMVLQEGVIPSLVSIAVNGTMRAKS 209
            LIS LA+ILD GEP+EQE A ACLL LC+GN++C +MVLQEGVIP LVS++VNGT R K 
Sbjct: 640  LISGLAAILDNGEPIEQEQAVACLLILCNGNERCSEMVLQEGVIPGLVSMSVNGTARGKE 699

Query: 208  KCQKLLTLFREQRQKEPKE---------PAQVQSRHEQSDNNEMPVXXXXXXXXXXXXXS 56
            K QKLL LFREQRQ+E            P  + +   +S    M V             S
Sbjct: 700  KAQKLLMLFREQRQRESPPAPPTAPTLIPTPIPTDQSESGGTSMDV---AESKPLCKSIS 756

Query: 55   RRVIGKNLSFWWKNKSFA 2
            RR  GK LSF WK+KS++
Sbjct: 757  RRKPGKALSFLWKSKSYS 774


>ref|XP_002311720.1| predicted protein [Populus trichocarpa] gi|222851540|gb|EEE89087.1|
            predicted protein [Populus trichocarpa]
          Length = 775

 Score =  122 bits (307), Expect = 2e-26
 Identities = 68/130 (52%), Positives = 90/130 (69%)
 Frame = -3

Query: 391  GLISELASILDIGEPLEQEHAAACLLTLCDGNDKCIQMVLQEGVIPSLVSIAVNGTMRAK 212
            GLIS LA+ILD  EP+EQE A ACL  LC+G++K  ++VLQEGVIP+LVSI+VNGT R K
Sbjct: 646  GLISGLATILDTVEPIEQEQAVACLFVLCNGSEKGSELVLQEGVIPALVSISVNGTTRGK 705

Query: 211  SKCQKLLTLFREQRQKEPKEPAQVQSRHEQSDNNEMPVXXXXXXXXXXXXXSRRVIGKNL 32
             K QKLL LFREQRQ++ +  A+V  +  +S +  MP              SRR +GK +
Sbjct: 706  EKAQKLLMLFREQRQRD-QPSAEVCFQRTESSSKSMPA---PESKPQCKPVSRRKMGKAI 761

Query: 31   SFWWKNKSFA 2
            SF+WK+KS++
Sbjct: 762  SFFWKSKSYS 771


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