BLASTX nr result
ID: Cnidium21_contig00035633
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00035633
(825 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002303120.1| predicted protein [Populus trichocarpa] gi|2... 150 4e-59
ref|XP_002526570.1| brca1 associated ring domain, putative [Rici... 144 3e-57
ref|XP_004163582.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL... 149 5e-56
ref|XP_004151994.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL... 149 5e-56
ref|XP_002271402.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL... 140 2e-53
>ref|XP_002303120.1| predicted protein [Populus trichocarpa] gi|222844846|gb|EEE82393.1|
predicted protein [Populus trichocarpa]
Length = 380
Score = 150 bits (378), Expect(2) = 4e-59
Identities = 63/110 (57%), Positives = 85/110 (77%), Gaps = 1/110 (0%)
Frame = -1
Query: 555 CAFCHSSEVTDETGEMIHYANGKLVVGSLKPFFNGIHVHKKCIDWTPQVYYEGD-FRNLE 379
C FCHSS +T +TG M+H+ANGK V G + IHVH CI+W PQVY+ G+ +NL+
Sbjct: 1 CGFCHSSRITADTGPMLHFANGKPVEGVEATLSDTIHVHAVCIEWAPQVYFVGETVKNLK 60
Query: 378 SELARASKLKCTACGLKGAGLGCFMKSCRRSYHVPCAIKTSDCRWDFSTE 229
+ELAR +KLKC+ CGLKGA LGC++KSC+RSYH PCA++ + CRWD+++E
Sbjct: 61 AELARGAKLKCSKCGLKGAALGCYLKSCKRSYHAPCAMEITKCRWDYASE 110
Score = 105 bits (261), Expect(2) = 4e-59
Identities = 49/78 (62%), Positives = 58/78 (74%)
Frame = -2
Query: 236 APKQVNVWASSLTGPKDWVLCGSALSSEEKCYLAKFASTCGATISRSWSPNVTHVIASTD 57
AP+Q N W S G K WV CGSALSSEEKC L KF S G +++ W+ NVTHVIA+TD
Sbjct: 146 APQQSNFWVGSCNGAKKWVFCGSALSSEEKCLLVKFGSMIGVPVNKFWASNVTHVIAATD 205
Query: 56 ANGAYTRTLKVLMAILHG 3
++GA TRTLK LMAIL+G
Sbjct: 206 SDGACTRTLKYLMAILNG 223
>ref|XP_002526570.1| brca1 associated ring domain, putative [Ricinus communis]
gi|223534131|gb|EEF35848.1| brca1 associated ring
domain, putative [Ricinus communis]
Length = 744
Score = 144 bits (363), Expect(2) = 3e-57
Identities = 63/108 (58%), Positives = 79/108 (73%), Gaps = 1/108 (0%)
Frame = -1
Query: 558 VCAFCHSSEVTDETGEMIHYANGKLVVGSLKPFFNGIHVHKKCIDWTPQVYYEGD-FRNL 382
+C FC SS + +TG M HY NGKLV G N +HVH+ CI+W PQVY+ + +NL
Sbjct: 349 MCGFCQSSRTSKDTGPMFHYVNGKLVEGDEASGPNALHVHRICIEWAPQVYFVDETVKNL 408
Query: 381 ESELARASKLKCTACGLKGAGLGCFMKSCRRSYHVPCAIKTSDCRWDF 238
++ELAR SKLKC+ CGLKGA LGCF KSCRRSYHV CA++ + CRWD+
Sbjct: 409 KAELARGSKLKCSKCGLKGAALGCFQKSCRRSYHVTCAMEIAGCRWDY 456
Score = 104 bits (259), Expect(2) = 3e-57
Identities = 49/77 (63%), Positives = 57/77 (74%)
Frame = -2
Query: 233 PKQVNVWASSLTGPKDWVLCGSALSSEEKCYLAKFASTCGATISRSWSPNVTHVIASTDA 54
P+Q N WA S TG K+WV CGSALSSEEK L +F G +++ W PNVTHVIA+TD
Sbjct: 495 PQQPNFWAESATGAKEWVFCGSALSSEEKSLLIEFGRMIGVPVTKFWQPNVTHVIAATDT 554
Query: 53 NGAYTRTLKVLMAILHG 3
GA TRTLKVLMAIL+G
Sbjct: 555 KGACTRTLKVLMAILNG 571
>ref|XP_004163582.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Cucumis
sativus]
Length = 679
Score = 149 bits (375), Expect(2) = 5e-56
Identities = 62/106 (58%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = -1
Query: 555 CAFCHSSEVTDETGEMIHYANGKLVVGSLKPFFNGIHVHKKCIDWTPQVYYEGD-FRNLE 379
CAFC SS+VT++TG ++HY NG+LV G N IHVHK C++W PQ Y++GD NL+
Sbjct: 298 CAFCQSSKVTEDTGAVLHYMNGRLVDGVEAASPNVIHVHKLCVEWAPQAYFQGDDVHNLK 357
Query: 378 SELARASKLKCTACGLKGAGLGCFMKSCRRSYHVPCAIKTSDCRWD 241
+E+AR SKLKC+ CGLKGA LGC+++SC++SYHVPCA++ +CRWD
Sbjct: 358 AEVARGSKLKCSKCGLKGAALGCYLRSCQKSYHVPCALEIDECRWD 403
Score = 95.9 bits (237), Expect(2) = 5e-56
Identities = 46/76 (60%), Positives = 55/76 (72%)
Frame = -2
Query: 230 KQVNVWASSLTGPKDWVLCGSALSSEEKCYLAKFASTCGATISRSWSPNVTHVIASTDAN 51
K ++ WAS+ G W CGSALS+EE+ L KFA GAT+S+ W P+VTHVIASTD N
Sbjct: 443 KDLSNWASASDGVNKWTFCGSALSAEERNILVKFAKLTGATVSKLWKPDVTHVIASTDEN 502
Query: 50 GAYTRTLKVLMAILHG 3
GA TRT KVLM IL+G
Sbjct: 503 GACTRTYKVLMGILNG 518
>ref|XP_004151994.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Cucumis
sativus]
Length = 679
Score = 149 bits (375), Expect(2) = 5e-56
Identities = 62/106 (58%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = -1
Query: 555 CAFCHSSEVTDETGEMIHYANGKLVVGSLKPFFNGIHVHKKCIDWTPQVYYEGD-FRNLE 379
CAFC SS+VT++TG ++HY NG+LV G N IHVHK C++W PQ Y++GD NL+
Sbjct: 298 CAFCQSSKVTEDTGAVLHYMNGRLVDGVEAASPNVIHVHKLCVEWAPQAYFQGDDVHNLK 357
Query: 378 SELARASKLKCTACGLKGAGLGCFMKSCRRSYHVPCAIKTSDCRWD 241
+E+AR SKLKC+ CGLKGA LGC+++SC++SYHVPCA++ +CRWD
Sbjct: 358 AEVARGSKLKCSKCGLKGAALGCYLRSCQKSYHVPCALEIDECRWD 403
Score = 95.9 bits (237), Expect(2) = 5e-56
Identities = 46/76 (60%), Positives = 55/76 (72%)
Frame = -2
Query: 230 KQVNVWASSLTGPKDWVLCGSALSSEEKCYLAKFASTCGATISRSWSPNVTHVIASTDAN 51
K ++ WAS+ G W CGSALS+EE+ L KFA GAT+S+ W P+VTHVIASTD N
Sbjct: 443 KDLSNWASASDGVNKWTFCGSALSAEERNILVKFAKLTGATVSKLWKPDVTHVIASTDEN 502
Query: 50 GAYTRTLKVLMAILHG 3
GA TRT KVLM IL+G
Sbjct: 503 GACTRTYKVLMGILNG 518
>ref|XP_002271402.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Vitis
vinifera]
Length = 417
Score = 140 bits (354), Expect(2) = 2e-53
Identities = 64/108 (59%), Positives = 79/108 (73%), Gaps = 1/108 (0%)
Frame = -1
Query: 558 VCAFCHSSEVTDETGEMIHYANGKLVVGSLKPFFNGIHVHKKCIDWTPQVYYEGD-FRNL 382
VC FC SS+++ TG M+HYANGK V S N IHVHKKC+DW P+VYY G+ NL
Sbjct: 40 VCGFCQSSKLSMATGPMLHYANGKPVQSSNIFDSNVIHVHKKCVDWAPRVYYAGETIINL 99
Query: 381 ESELARASKLKCTACGLKGAGLGCFMKSCRRSYHVPCAIKTSDCRWDF 238
E EL R+ +L+C+ CGLKGA LGC+MK CR+S+HV CA+K CRWDF
Sbjct: 100 EKELERSGQLECSGCGLKGAALGCYMKHCRKSFHVLCAMKILHCRWDF 147
Score = 95.1 bits (235), Expect(2) = 2e-53
Identities = 46/79 (58%), Positives = 57/79 (72%)
Frame = -2
Query: 239 SAPKQVNVWASSLTGPKDWVLCGSALSSEEKCYLAKFASTCGATISRSWSPNVTHVIAST 60
S Q++ ASS G +WVLCGSALS++EK L KF T ++S+ W+PNVTHVI +T
Sbjct: 178 SKSTQISFGASSQKGVTEWVLCGSALSTKEKFLLVKFGETICVSVSKYWNPNVTHVITAT 237
Query: 59 DANGAYTRTLKVLMAILHG 3
D NGA RT+KVLMAILHG
Sbjct: 238 DVNGACCRTIKVLMAILHG 256