BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035558
         (1200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containi...   415   e-113
emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]   415   e-113
ref|XP_002532584.1| pentatricopeptide repeat-containing protein,...   389   e-106
ref|XP_004144802.1| PREDICTED: pentatricopeptide repeat-containi...   383   e-104
ref|XP_004172369.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   382   e-104

>ref|XP_002269136.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
            [Vitis vinifera]
          Length = 881

 Score =  415 bits (1067), Expect = e-113
 Identities = 213/404 (52%), Positives = 283/404 (70%), Gaps = 5/404 (1%)
 Frame = +3

Query: 3    QSCFDAFDMVAKQIEFRGLKNSVTHAVLVKGLCKKKEWDRAESYTRDLVTSGMG--SSEA 176
            ++CFDAF +V +QI  RGL N +TH+++VK  CK+ + D A+++   LV SG    S   
Sbjct: 224  ENCFDAFRVVVEQIRMRGLDNEITHSIIVKNFCKQGQLDEAKAFVEQLVESGRVGLSGGH 283

Query: 177  VIGTLVAGLCKDKMFERAAEVVEEFGGS-KVPLQAAYNMWIRDLVRAGQLEGALKILKKM 353
            ++G +V  LCK K F  A  +VEEF GS  V ++ AY +WIRDLVRAG+L+GAL+ L   
Sbjct: 284  MVGLIVDALCKRKRFGEAGRLVEEFQGSGMVSVEQAYGVWIRDLVRAGRLDGALEFLHSK 343

Query: 354  KGLDG--PDVFRYXXXXXXXXXXXXHMEVYDLLMEMMERQLCPDEETMNCVLCFFCKIGL 527
            K  +G  P+V  Y              EV DLLMEM E Q+ PD+ TMN VLCFFCK G+
Sbjct: 344  KESEGYVPEVCGYNILICRLLRENRLEEVLDLLMEMREGQILPDKVTMNAVLCFFCKAGM 403

Query: 528  VDEAVQLYDAKVEFRLSPNSTAYNFLISTLCAEGNTDEAYRVLRGSLTHGYIPGQNSFSI 707
            VD A++LY+++ EF LSPNS AYN+LI+TLC +G+TDEAY VL+ SL  GY PG+ +FSI
Sbjct: 404  VDVALELYNSRAEFGLSPNSMAYNYLINTLCGDGSTDEAYHVLKHSLEQGYFPGKKTFSI 463

Query: 708  VADALCRERKVDEMKDLVLVALERNFAPSSSIYSKFISAMSKNNRVEDGYMLHGQLNQLN 887
            +ADALC+E K+D+MK+LVLVAL+RN  PS+S Y KFI A+ K  RV+DGY++ G+LN++N
Sbjct: 464  LADALCQEGKLDKMKELVLVALDRNIMPSASTYDKFILALCKARRVDDGYLIQGELNKIN 523

Query: 888  KVTSRHAYMSLIDAFKKTNRGDIAVRLLIEMQEKGHDPTPTTFKHVIELLFDMDNPEQKF 1067
            KV S++ Y ++I  F   NR DIA RLLIE+QEKGH PT + F+ VI  L DMDN E++F
Sbjct: 524  KVASKNTYFNMIRGFNILNRADIAARLLIELQEKGHTPTRSLFRAVICRLCDMDNAEKQF 583

Query: 1068 FRMLEIQLSRQGQKRHVYRLFIFAAGHARKPELARAVYDKMLDS 1199
             ++LE+QLS Q     VY  FI  AGHA+KPELAR V++ M+ S
Sbjct: 584  LKLLELQLSHQEPNCQVYNFFIDGAGHAKKPELAREVFEMMVRS 627


>emb|CAN76479.1| hypothetical protein VITISV_028175 [Vitis vinifera]
          Length = 1173

 Score =  415 bits (1067), Expect = e-113
 Identities = 213/404 (52%), Positives = 283/404 (70%), Gaps = 5/404 (1%)
 Frame = +3

Query: 3    QSCFDAFDMVAKQIEFRGLKNSVTHAVLVKGLCKKKEWDRAESYTRDLVTSGMG--SSEA 176
            ++CFDAF +V +QI  RGL N +TH+++VK  CK+ + D A+++   LV SG    S   
Sbjct: 224  ENCFDAFRVVVEQIRMRGLDNEITHSIIVKNFCKQGQLDEAKAFVEQLVESGRVGLSGGH 283

Query: 177  VIGTLVAGLCKDKMFERAAEVVEEFGGS-KVPLQAAYNMWIRDLVRAGQLEGALKILKKM 353
            ++G +V  LCK K F  A  +VEEF GS  V ++ AY +WIRDLVRAG+L+GAL+ L   
Sbjct: 284  MVGLIVDALCKRKRFGEAGRLVEEFQGSGMVSVEQAYGVWIRDLVRAGRLDGALEFLHSK 343

Query: 354  KGLDG--PDVFRYXXXXXXXXXXXXHMEVYDLLMEMMERQLCPDEETMNCVLCFFCKIGL 527
            K  +G  P+V  Y              EV DLLMEM E Q+ PD+ TMN VLCFFCK G+
Sbjct: 344  KESEGYVPEVCGYNILICRLLRENRLEEVLDLLMEMREGQILPDKVTMNAVLCFFCKAGM 403

Query: 528  VDEAVQLYDAKVEFRLSPNSTAYNFLISTLCAEGNTDEAYRVLRGSLTHGYIPGQNSFSI 707
            VD A++LY+++ EF LSPNS AYN+LI+TLC +G+TDEAY VL+ SL  GY PG+ +FSI
Sbjct: 404  VDVALELYNSRAEFGLSPNSMAYNYLINTLCGDGSTDEAYHVLKHSLEQGYFPGKKTFSI 463

Query: 708  VADALCRERKVDEMKDLVLVALERNFAPSSSIYSKFISAMSKNNRVEDGYMLHGQLNQLN 887
            +ADALC+E K+D+MK+LVLVAL+RN  PS+S Y KFI A+ K  RV+DGY++ G+LN++N
Sbjct: 464  LADALCQEGKLDKMKELVLVALDRNIMPSASTYDKFILALCKARRVDDGYLIQGELNKIN 523

Query: 888  KVTSRHAYMSLIDAFKKTNRGDIAVRLLIEMQEKGHDPTPTTFKHVIELLFDMDNPEQKF 1067
            KV S++ Y ++I  F   NR DIA RLLIE+QEKGH PT + F+ VI  L DMDN E++F
Sbjct: 524  KVASKNTYFNMIRGFNILNRADIAARLLIELQEKGHTPTRSLFRAVICRLCDMDNAEKQF 583

Query: 1068 FRMLEIQLSRQGQKRHVYRLFIFAAGHARKPELARAVYDKMLDS 1199
             ++LE+QLS Q     VY  FI  AGHA+KPELAR V++ M+ S
Sbjct: 584  LKLLELQLSHQEPNCQVYNFFIDGAGHAKKPELAREVFEMMVRS 627


>ref|XP_002532584.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527693|gb|EEF29801.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 895

 Score =  389 bits (999), Expect = e-106
 Identities = 192/399 (48%), Positives = 265/399 (66%), Gaps = 3/399 (0%)
 Frame = +3

Query: 3    QSCFDAFDMVAKQIEFRGLKNSVTHAVLVKGLCKKKEWDRAESYTRDLVTSGMGSSEAVI 182
            + CFDA D +AKQI  RG ++ +TH+++VK  CK++  D AE+Y R ++  G   + A +
Sbjct: 240  ECCFDAVDDIAKQISIRGFESHITHSIVVKSFCKQRMLDEAEAYLRRMILQGESGNGAAV 299

Query: 183  GTLVAGLCKDKMFERAAEVVEEFGGSKV-PLQAAYNMWIRDLVRAGQLEGALKILKKMKG 359
            G LV   C+   FE+A +++EEF   +V PL  AY +W+R+LV+ G+L+GAL   ++ K 
Sbjct: 300  GILVGAFCQKGQFEKAGQLIEEFRELRVVPLYPAYGVWLRNLVQKGKLDGALDFFQQKKT 359

Query: 360  LDG--PDVFRYXXXXXXXXXXXXHMEVYDLLMEMMERQLCPDEETMNCVLCFFCKIGLVD 533
            L+   P++F Y              E  DLLMEMME    PD+ TMN  L FFCK G+VD
Sbjct: 360  LESYVPEIFHYNALLCRLLKENRLTEACDLLMEMMEDGFSPDKVTMNAALSFFCKAGMVD 419

Query: 534  EAVQLYDAKVEFRLSPNSTAYNFLISTLCAEGNTDEAYRVLRGSLTHGYIPGQNSFSIVA 713
             A+ LY+ K EF LSP++   N+LI++LC EGN D+AY VL+ S  HGY PG+ +FS++ 
Sbjct: 420  VALDLYNCKSEFGLSPSTMTCNYLINSLCREGNVDDAYHVLKSSSEHGYFPGKRAFSMLT 479

Query: 714  DALCRERKVDEMKDLVLVALERNFAPSSSIYSKFISAMSKNNRVEDGYMLHGQLNQLNKV 893
            DAL RE KV+ M +L   ALERNF PS S+Y KFISA+ K  R+EDGY++HG+LN+ N+V
Sbjct: 480  DALHREGKVEMMNELFFWALERNFIPSDSMYDKFISALCKARRLEDGYLIHGELNRFNRV 539

Query: 894  TSRHAYMSLIDAFKKTNRGDIAVRLLIEMQEKGHDPTPTTFKHVIELLFDMDNPEQKFFR 1073
              +  Y +LI  F K NRGDIA RLLIEMQ+KGH P  T F+ VI  L +MD+PE +FF 
Sbjct: 540  AKKSTYSNLIHGFNKFNRGDIAARLLIEMQDKGHLPARTLFRAVIRSLCEMDDPETRFFN 599

Query: 1074 MLEIQLSRQGQKRHVYRLFIFAAGHARKPELARAVYDKM 1190
             L++QLSR+     +Y  FI  AGHA+KP++AR V++ M
Sbjct: 600  YLDMQLSRRDPNCQIYNFFIDGAGHAKKPDIARKVFEMM 638


>ref|XP_004144802.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71210-like
            [Cucumis sativus]
          Length = 913

 Score =  383 bits (984), Expect = e-104
 Identities = 194/401 (48%), Positives = 271/401 (67%), Gaps = 4/401 (0%)
 Frame = +3

Query: 3    QSCFDAFDMVAKQIEFRGLKNSVTHAVLVKGLCKKKEWDRAESYTRDLVTSGMGSSEAVI 182
            ++CFDA +++ KQI  RG  N +TH +++K  CK+ + D AE++  DLV SG   +  ++
Sbjct: 250  ENCFDAVNVIIKQITLRGFVNEITHYLMLKSFCKQNQLDEAETFLHDLVDSGKKLNGRML 309

Query: 183  GTLVAGLCKDKMFERAAEVVEEFGGSK-VPLQAAYNMWIRDLVRAGQLEGALKILKKMKG 359
              LV   C+   FERA ++VE F   + V ++  Y +WI +L+RAG+LE AL+ L   K 
Sbjct: 310  DLLVGAFCQSGNFERAWKLVEWFRDLQIVSMEHVYGVWITELIRAGKLESALQFLNSSK- 368

Query: 360  LDG---PDVFRYXXXXXXXXXXXXHMEVYDLLMEMMERQLCPDEETMNCVLCFFCKIGLV 530
            LDG   PDVFRY              EV+DLL EMM++ + PD+ TM+  +CF CK G+V
Sbjct: 369  LDGRYIPDVFRYNMLIHRLLRENRLQEVFDLLTEMMDQHISPDKVTMDAAMCFLCKAGMV 428

Query: 531  DEAVQLYDAKVEFRLSPNSTAYNFLISTLCAEGNTDEAYRVLRGSLTHGYIPGQNSFSIV 710
            + A++LY++  EF +SPN+ AYN+LI+ LC +G+TDEAYR+L+ S+  GY PG+ +FSI+
Sbjct: 429  EVALELYNSNFEFGISPNTMAYNYLINALCRDGSTDEAYRILKCSIYEGYFPGKKTFSIL 488

Query: 711  ADALCRERKVDEMKDLVLVALERNFAPSSSIYSKFISAMSKNNRVEDGYMLHGQLNQLNK 890
            A ALCRE K+D+MK+LV+ ALERN  P+ S Y KFI A+ +  RVEDGY++H +LN++N 
Sbjct: 489  ASALCREGKLDKMKELVIFALERNCMPNDSTYDKFIYALCRARRVEDGYLIHCELNRINV 548

Query: 891  VTSRHAYMSLIDAFKKTNRGDIAVRLLIEMQEKGHDPTPTTFKHVIELLFDMDNPEQKFF 1070
            V +R  Y  LI+ F K+ RGDIA RLLIEM EKGH+P    F+ VI  L +M+N E++FF
Sbjct: 549  VATRSTYFVLIEGFIKSGRGDIAARLLIEMLEKGHNPPRGLFRSVILCLIEMENMEKQFF 608

Query: 1071 RMLEIQLSRQGQKRHVYRLFIFAAGHARKPELARAVYDKML 1193
             +LE+QLS Q     VY  FI+AAG A+KPELA  VY  ML
Sbjct: 609  NLLELQLSCQEPNSEVYNNFIYAAGRAKKPELANEVYHMML 649


>ref|XP_004172369.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At1g71210-like, partial [Cucumis sativus]
          Length = 889

 Score =  382 bits (982), Expect = e-104
 Identities = 194/401 (48%), Positives = 270/401 (67%), Gaps = 4/401 (0%)
 Frame = +3

Query: 3    QSCFDAFDMVAKQIEFRGLKNSVTHAVLVKGLCKKKEWDRAESYTRDLVTSGMGSSEAVI 182
            ++CFDA +++ KQI  RG  N +TH +++K  CK+ + D AE++  DLV SG   +  ++
Sbjct: 226  ENCFDAVNVIIKQITLRGFVNEITHYLMLKSFCKQNQLDEAETFLHDLVDSGKKLNGRML 285

Query: 183  GTLVAGLCKDKMFERAAEVVEEFGGSK-VPLQAAYNMWIRDLVRAGQLEGALKILKKMKG 359
              LV   C+   FERA ++VE F   + V ++  Y +WI +L+RAG+LE AL+ L   K 
Sbjct: 286  DLLVGAFCQSGNFERAWKLVEWFRDLQIVSMEHVYGVWITELIRAGKLESALQFLNSSK- 344

Query: 360  LDG---PDVFRYXXXXXXXXXXXXHMEVYDLLMEMMERQLCPDEETMNCVLCFFCKIGLV 530
            LDG   PDVFRY              EV+DLL EMM++ + PD+ TM+  +CF CK G+V
Sbjct: 345  LDGRYIPDVFRYNMLIHRLLRENRLQEVFDLLTEMMDQHISPDKVTMDAAMCFLCKAGMV 404

Query: 531  DEAVQLYDAKVEFRLSPNSTAYNFLISTLCAEGNTDEAYRVLRGSLTHGYIPGQNSFSIV 710
            + A++LY++  EF +SPN+ AYN+LI+ LC +G+TDEAYR+L+ S+  GY PG+  FSI+
Sbjct: 405  EVALELYNSNFEFGISPNTMAYNYLINALCRDGSTDEAYRILKCSIYEGYFPGKKXFSIL 464

Query: 711  ADALCRERKVDEMKDLVLVALERNFAPSSSIYSKFISAMSKNNRVEDGYMLHGQLNQLNK 890
            A ALCRE K+D+MK+LV+ ALERN  P+ S Y KFI A+ +  RVEDGY++H +LN++N 
Sbjct: 465  ASALCREGKLDKMKELVIFALERNCMPNDSTYDKFIYALCRARRVEDGYLIHCELNRINV 524

Query: 891  VTSRHAYMSLIDAFKKTNRGDIAVRLLIEMQEKGHDPTPTTFKHVIELLFDMDNPEQKFF 1070
            V +R  Y  LI+ F K+ RGDIA RLLIEM EKGH+P    F+ VI  L +M+N E++FF
Sbjct: 525  VATRSTYFVLIEGFIKSGRGDIAARLLIEMLEKGHNPPRGLFRSVILCLIEMENMEKQFF 584

Query: 1071 RMLEIQLSRQGQKRHVYRLFIFAAGHARKPELARAVYDKML 1193
             +LE+QLS Q     VY  FI+AAG A+KPELA  VY  ML
Sbjct: 585  NLLELQLSCQEPNSEVYNNFIYAAGRAKKPELANEVYHMML 625