BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035507
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514651.1| replication factor A 1, rfa1, putative [Rici...   172   3e-41
ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arab...   171   6e-41
ref|NP_200908.1| Replication factor-A protein 1-like protein [Ar...   165   3e-39
dbj|BAD94042.1| RNA helicase [Arabidopsis thaliana]                   165   3e-39
ref|XP_002328669.1| predicted protein [Populus trichocarpa] gi|2...   164   5e-39

>ref|XP_002514651.1| replication factor A 1, rfa1, putative [Ricinus communis]
           gi|223546255|gb|EEF47757.1| replication factor A 1,
           rfa1, putative [Ricinus communis]
          Length = 622

 Score =  172 bits (436), Expect = 3e-41
 Identities = 80/97 (82%), Positives = 90/97 (92%)
 Frame = +2

Query: 2   VIVVNPETPESKKLKSWYDSEGKETSMASVGTGLSPSSKSGGRSMYTDRVSISYITSNPS 181
           +I VNP+TPESKKLKSW+DSEGKETS+ASVG GLSPS+KSGG SMY+DRVSIS+ITSNPS
Sbjct: 399 IIQVNPDTPESKKLKSWFDSEGKETSLASVGAGLSPSTKSGGGSMYSDRVSISHITSNPS 458

Query: 182 LGEEKPVFFSTKGYISFIKPDQSMWYRACKTCSKKVT 292
           LG +KP FFS + YISFIKPDQSMWYRACKTC+KKVT
Sbjct: 459 LGSDKPAFFSIRAYISFIKPDQSMWYRACKTCNKKVT 495


>ref|XP_002866409.1| hypothetical protein ARALYDRAFT_496254 [Arabidopsis lyrata subsp.
           lyrata] gi|297312244|gb|EFH42668.1| hypothetical protein
           ARALYDRAFT_496254 [Arabidopsis lyrata subsp. lyrata]
          Length = 631

 Score =  171 bits (433), Expect = 6e-41
 Identities = 76/96 (79%), Positives = 92/96 (95%)
 Frame = +2

Query: 5   IVVNPETPESKKLKSWYDSEGKETSMASVGTGLSPSSKSGGRSMYTDRVSISYITSNPSL 184
           +V+NPE+PE+KKLKSW+DSEGKE SM+S+G+G+SPSSK+G RSMYTDRV +S+ITSNPSL
Sbjct: 407 VVINPESPEAKKLKSWFDSEGKEISMSSIGSGMSPSSKNGSRSMYTDRVLLSHITSNPSL 466

Query: 185 GEEKPVFFSTKGYISFIKPDQSMWYRACKTCSKKVT 292
           GEEKPVFFST+ YISFIKPDQ+MWY+ACKTC+KKVT
Sbjct: 467 GEEKPVFFSTRAYISFIKPDQTMWYQACKTCNKKVT 502


>ref|NP_200908.1| Replication factor-A protein 1-like protein [Arabidopsis thaliana]
           gi|10177323|dbj|BAB10649.1| replication protein A1
           [Arabidopsis thaliana] gi|28393124|gb|AAO41995.1|
           putative RNA helicase [Arabidopsis thaliana]
           gi|332010026|gb|AED97409.1| Replication factor-A protein
           1-like protein [Arabidopsis thaliana]
          Length = 629

 Score =  165 bits (418), Expect = 3e-39
 Identities = 73/96 (76%), Positives = 91/96 (94%)
 Frame = +2

Query: 5   IVVNPETPESKKLKSWYDSEGKETSMASVGTGLSPSSKSGGRSMYTDRVSISYITSNPSL 184
           +V+NPE+PE+KKLKSW+DSEGKE SM+S+G+G+SPS+K+G RS+YTDRV +S+ITSNPSL
Sbjct: 405 VVINPESPEAKKLKSWFDSEGKEISMSSIGSGMSPSAKNGSRSLYTDRVLLSHITSNPSL 464

Query: 185 GEEKPVFFSTKGYISFIKPDQSMWYRACKTCSKKVT 292
            EEKPVFFST+ YISFIKPDQ+MWY+ACKTC+KKVT
Sbjct: 465 FEEKPVFFSTRAYISFIKPDQTMWYQACKTCNKKVT 500


>dbj|BAD94042.1| RNA helicase [Arabidopsis thaliana]
          Length = 253

 Score =  165 bits (418), Expect = 3e-39
 Identities = 73/96 (76%), Positives = 91/96 (94%)
 Frame = +2

Query: 5   IVVNPETPESKKLKSWYDSEGKETSMASVGTGLSPSSKSGGRSMYTDRVSISYITSNPSL 184
           +V+NPE+PE+KKLKSW+DSEGKE SM+S+G+G+SPS+K+G RS+YTDRV +S+ITSNPSL
Sbjct: 29  VVINPESPEAKKLKSWFDSEGKEISMSSIGSGMSPSAKNGSRSLYTDRVLLSHITSNPSL 88

Query: 185 GEEKPVFFSTKGYISFIKPDQSMWYRACKTCSKKVT 292
            EEKPVFFST+ YISFIKPDQ+MWY+ACKTC+KKVT
Sbjct: 89  FEEKPVFFSTRAYISFIKPDQTMWYQACKTCNKKVT 124


>ref|XP_002328669.1| predicted protein [Populus trichocarpa] gi|222838845|gb|EEE77196.1|
           predicted protein [Populus trichocarpa]
          Length = 603

 Score =  164 bits (416), Expect = 5e-39
 Identities = 75/97 (77%), Positives = 89/97 (91%)
 Frame = +2

Query: 2   VIVVNPETPESKKLKSWYDSEGKETSMASVGTGLSPSSKSGGRSMYTDRVSISYITSNPS 181
           ++ VNP   ES+KL++WYDSEGKETSMASVG+GLSPS+KSG RSMY+DRVS+S+ITSNPS
Sbjct: 380 IVQVNPVIAESEKLRNWYDSEGKETSMASVGSGLSPSTKSGARSMYSDRVSLSHITSNPS 439

Query: 182 LGEEKPVFFSTKGYISFIKPDQSMWYRACKTCSKKVT 292
           LGE+KP FFS + YISFIKPDQ+MWYRACKTC+KKVT
Sbjct: 440 LGEDKPAFFSIRAYISFIKPDQTMWYRACKTCNKKVT 476