BLASTX nr result

ID: Cnidium21_contig00035502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035502
         (726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat an...   369   e-100
emb|CBI15364.3| unnamed protein product [Vitis vinifera]              369   e-100
ref|XP_004138211.1| PREDICTED: WD repeat and HMG-box DNA-binding...   352   3e-95
ref|XP_003527122.1| PREDICTED: WD repeat and HMG-box DNA-binding...   322   6e-86
ref|XP_002875584.1| hypothetical protein ARALYDRAFT_905380 [Arab...   322   6e-86

>ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat and HMG-box DNA-binding
            protein 1-like [Vitis vinifera]
          Length = 965

 Score =  369 bits (948), Expect = e-100
 Identities = 183/241 (75%), Positives = 211/241 (87%)
 Frame = -3

Query: 724  NSWVAAVTSLNFLRIFTEGGLQKHVLSLDGPVVTVSGSGDELAVVTHSSSPLASSEQMLE 545
            ++WVAAVTSLNFLRIFT+GGLQ++V+SLDGPVVT SG  DELAVVTH+S  L S++QML+
Sbjct: 533  SAWVAAVTSLNFLRIFTDGGLQRYVISLDGPVVTASGFKDELAVVTHASHCLPSNDQMLK 592

Query: 544  FRVFNICSRTLPKRGKLPITPGSSLTWFGFSEECQLSSFDSKGVLRVFTNQYGGSWLPLF 365
            FRVFNI + T P +G +P+TPGS LTWFGFSEE QLSS+DSKGVLRVFTNQ+GGSWLPLF
Sbjct: 593  FRVFNISNGTQPLKGHVPLTPGSCLTWFGFSEEGQLSSYDSKGVLRVFTNQFGGSWLPLF 652

Query: 364  SASKLKKPEDNYWVAGLNASKLFCIVCKSPDSFPQVIPKPVLTLLDLSCPLASSDLGADN 185
            SASK +K E+NYWVAGLN +KLFCIVCKSPD FP V+PKPVLTLLDLS PLA+SDLGA+ 
Sbjct: 653  SASK-EKSEENYWVAGLNMNKLFCIVCKSPDLFPPVMPKPVLTLLDLSFPLATSDLGAET 711

Query: 184  LENEFICNNIQLCQIQSRIDEMLASGQDTSSLDDEAFSVEAVQDRCILRLIASCCNGDKL 5
            LENEFI  N+ L QIQ RI+EM A+G DT+SLDDEAF+VE   DRCILRLIASCCNGDK+
Sbjct: 712  LENEFILKNMHLLQIQQRIEEMAAAGLDTTSLDDEAFNVETALDRCILRLIASCCNGDKI 771

Query: 4    V 2
            V
Sbjct: 772  V 772


>emb|CBI15364.3| unnamed protein product [Vitis vinifera]
          Length = 1427

 Score =  369 bits (948), Expect = e-100
 Identities = 183/241 (75%), Positives = 211/241 (87%)
 Frame = -3

Query: 724  NSWVAAVTSLNFLRIFTEGGLQKHVLSLDGPVVTVSGSGDELAVVTHSSSPLASSEQMLE 545
            ++WVAAVTSLNFLRIFT+GGLQ++V+SLDGPVVT SG  DELAVVTH+S  L S++QML+
Sbjct: 494  SAWVAAVTSLNFLRIFTDGGLQRYVISLDGPVVTASGFKDELAVVTHASHCLPSNDQMLK 553

Query: 544  FRVFNICSRTLPKRGKLPITPGSSLTWFGFSEECQLSSFDSKGVLRVFTNQYGGSWLPLF 365
            FRVFNI + T P +G +P+TPGS LTWFGFSEE QLSS+DSKGVLRVFTNQ+GGSWLPLF
Sbjct: 554  FRVFNISNGTQPLKGHVPLTPGSCLTWFGFSEEGQLSSYDSKGVLRVFTNQFGGSWLPLF 613

Query: 364  SASKLKKPEDNYWVAGLNASKLFCIVCKSPDSFPQVIPKPVLTLLDLSCPLASSDLGADN 185
            SASK +K E+NYWVAGLN +KLFCIVCKSPD FP V+PKPVLTLLDLS PLA+SDLGA+ 
Sbjct: 614  SASK-EKSEENYWVAGLNMNKLFCIVCKSPDLFPPVMPKPVLTLLDLSFPLATSDLGAET 672

Query: 184  LENEFICNNIQLCQIQSRIDEMLASGQDTSSLDDEAFSVEAVQDRCILRLIASCCNGDKL 5
            LENEFI  N+ L QIQ RI+EM A+G DT+SLDDEAF+VE   DRCILRLIASCCNGDK+
Sbjct: 673  LENEFILKNMHLLQIQQRIEEMAAAGLDTTSLDDEAFNVETALDRCILRLIASCCNGDKI 732

Query: 4    V 2
            V
Sbjct: 733  V 733


>ref|XP_004138211.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like [Cucumis
            sativus] gi|449477125|ref|XP_004154937.1| PREDICTED: WD
            repeat and HMG-box DNA-binding protein 1-like [Cucumis
            sativus]
          Length = 962

 Score =  352 bits (904), Expect = 3e-95
 Identities = 171/239 (71%), Positives = 204/239 (85%)
 Frame = -3

Query: 718  WVAAVTSLNFLRIFTEGGLQKHVLSLDGPVVTVSGSGDELAVVTHSSSPLASSEQMLEFR 539
            WVAA TSL++LR+FT+GGLQKH+LSLDGPVVT SG  DELA VTHSS+ L S++Q+LEFR
Sbjct: 541  WVAAFTSLSYLRVFTDGGLQKHILSLDGPVVTASGFKDELAFVTHSSTCLPSNDQVLEFR 600

Query: 538  VFNICSRTLPKRGKLPITPGSSLTWFGFSEECQLSSFDSKGVLRVFTNQYGGSWLPLFSA 359
            + NI + T   RG+LP+TPGS LTWFGFSEE +LSS+DSKGVLRVFTNQYGGSW+PLFSA
Sbjct: 601  ILNISNGTQLLRGRLPLTPGSYLTWFGFSEEGKLSSYDSKGVLRVFTNQYGGSWVPLFSA 660

Query: 358  SKLKKPEDNYWVAGLNASKLFCIVCKSPDSFPQVIPKPVLTLLDLSCPLASSDLGADNLE 179
            SK +K ++NYWVAGLNA+KLFC++CK+PDS+PQV PKPVLTLL+LS PLA SDLGA+ LE
Sbjct: 661  SKERKSDENYWVAGLNANKLFCVICKNPDSYPQVTPKPVLTLLNLSFPLALSDLGAEALE 720

Query: 178  NEFICNNIQLCQIQSRIDEMLASGQDTSSLDDEAFSVEAVQDRCILRLIASCCNGDKLV 2
            NEF+ N++ L QI   ++EM   G   + LDDEAFS+EA QDRCILRLIASCCNGDKLV
Sbjct: 721  NEFMMNDMYLKQIHGTMEEMALRGLYDTELDDEAFSIEAAQDRCILRLIASCCNGDKLV 779


>ref|XP_003527122.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like [Glycine
            max]
          Length = 972

 Score =  322 bits (824), Expect = 6e-86
 Identities = 158/242 (65%), Positives = 199/242 (82%), Gaps = 1/242 (0%)
 Frame = -3

Query: 724  NSWVAAVTSLNFLRIFTEGGLQKHVLSLDGPVVTVSGSGDELAVVTHSSSPLASSEQMLE 545
            ++WVAAVTS N+LRIF+EGGLQ+ V SLDGPVVT SG  D+LAVVTH++  L S++Q LE
Sbjct: 536  SAWVAAVTSFNYLRIFSEGGLQRDVFSLDGPVVTASGFKDKLAVVTHATDGLLSNDQKLE 595

Query: 544  FRVFNICSRTLPKRGKLPITPGSSLTWFGFSEECQLSSFDSKGVLRVFTNQYGGSWLPLF 365
            F VFNI   TL  +G+LP++PGSSL+WFGFSEE QL S+DSKGVLR +T+++GG W+PLF
Sbjct: 596  FMVFNIPRGTLLLQGRLPLSPGSSLSWFGFSEEGQLCSYDSKGVLRSYTSKFGGRWIPLF 655

Query: 364  SASKLKKPEDNYWVAGLNASKLFCIVCKSPDSFPQVIPKPVLTLLDLSCPLASSDLGADN 185
            SA+K +K ++NYWV GLNASK+FC+VCK P+ FPQV+PKPVLT L+LS PLASSDLG   
Sbjct: 656  SATK-EKSDENYWVTGLNASKVFCVVCKKPEDFPQVMPKPVLTPLNLSFPLASSDLGGSE 714

Query: 184  L-ENEFICNNIQLCQIQSRIDEMLASGQDTSSLDDEAFSVEAVQDRCILRLIASCCNGDK 8
              E EF+ NN++L +IQ  +DEM + G DT+SLDD+AF+ EA QD+CILRLIA+CCN DK
Sbjct: 715  AHEKEFMMNNLRLYEIQRTMDEMASVGLDTTSLDDDAFNFEAAQDKCILRLIAACCNSDK 774

Query: 7    LV 2
            LV
Sbjct: 775  LV 776


>ref|XP_002875584.1| hypothetical protein ARALYDRAFT_905380 [Arabidopsis lyrata subsp.
            lyrata] gi|297321422|gb|EFH51843.1| hypothetical protein
            ARALYDRAFT_905380 [Arabidopsis lyrata subsp. lyrata]
          Length = 952

 Score =  322 bits (824), Expect = 6e-86
 Identities = 154/241 (63%), Positives = 189/241 (78%)
 Frame = -3

Query: 724  NSWVAAVTSLNFLRIFTEGGLQKHVLSLDGPVVTVSGSGDELAVVTHSSSPLASSEQMLE 545
            + WVAAVTSLN LRIF+EGGLQKH+LSLDGPVVT  G  D LAVVTH S  L S+EQ++E
Sbjct: 543  SGWVAAVTSLNLLRIFSEGGLQKHILSLDGPVVTAVGCKDHLAVVTHVSECLPSNEQVME 602

Query: 544  FRVFNICSRTLPKRGKLPITPGSSLTWFGFSEECQLSSFDSKGVLRVFTNQYGGSWLPLF 365
            FRVFNI   T   +G++ +TPGS LTW GFS+E  LSS+DS+GVLRVFT+QYGGSW+P+F
Sbjct: 603  FRVFNISKMTQELKGRVALTPGSRLTWIGFSDEGSLSSYDSEGVLRVFTSQYGGSWIPVF 662

Query: 364  SASKLKKPEDNYWVAGLNASKLFCIVCKSPDSFPQVIPKPVLTLLDLSCPLASSDLGADN 185
            S SK KK E+NYWV GLN + L+CI CK P+ FPQV PKP+LT+LDLS PLASSDLGA +
Sbjct: 663  STSKEKKQEENYWVVGLNTTSLYCIACKYPEIFPQVTPKPILTILDLSLPLASSDLGAAS 722

Query: 184  LENEFICNNIQLCQIQSRIDEMLASGQDTSSLDDEAFSVEAVQDRCILRLIASCCNGDKL 5
            LENE +   + L + Q R+D+M   G DT++L+DEAF +E  QD+CILRLI+SCC+ D  
Sbjct: 723  LENELMLKQLLLYETQRRVDDMALVGVDTTALEDEAFDLEVSQDKCILRLISSCCSSDSF 782

Query: 4    V 2
            V
Sbjct: 783  V 783


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