BLASTX nr result

ID: Cnidium21_contig00035475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035475
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298051.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
ref|XP_002301618.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08
ref|XP_002509756.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
gb|ADW77269.1| CLE15 protein [Glycine max]                             55   8e-06

>ref|XP_002298051.1| predicted protein [Populus trichocarpa] gi|222845309|gb|EEE82856.1|
           predicted protein [Populus trichocarpa]
          Length = 86

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 3/81 (3%)
 Frame = -2

Query: 440 PGVSFLFIMVMLSFTQLSNCRDIHRSTTEGTTTQMKPGLHSSSS--FPAEAPVAVNNPHT 267
           P  SFLF+M++L+ +QLS+CR +H +  + T   ++  + +  S  F A+AP   N    
Sbjct: 6   PRRSFLFLMIILAISQLSSCRYLHINIRDQTNQTVETDVSTQFSWHFTAKAPEGSNKDEI 65

Query: 266 D-PIYGMSERTVPGGPNPLHN 207
           D P+YG S RTVPGGPNPLHN
Sbjct: 66  DDPVYGASYRTVPGGPNPLHN 86


>ref|XP_002301618.1| predicted protein [Populus trichocarpa]
           gi|224103377|ref|XP_002334059.1| predicted protein
           [Populus trichocarpa] gi|222839755|gb|EEE78078.1|
           predicted protein [Populus trichocarpa]
           gi|222843344|gb|EEE80891.1| predicted protein [Populus
           trichocarpa]
          Length = 87

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 33/81 (40%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
 Frame = -2

Query: 443 YPGVSFLFIMVMLSFTQLSNCRDIHRSTTE--GTTTQMKPGLHSSSSFPAEAPVAVNNPH 270
           YP +SF  +M+ML   QLS+C  IH  T+E  G T +     H S  F        +   
Sbjct: 7   YPRLSFFVLMIMLVVNQLSSCHFIHSRTSEEPGKTVETDLSSHFSWKFKEMVRERSSKDE 66

Query: 269 TDPIYGMSERTVPGGPNPLHN 207
           +D IY +S R +P GPNPLHN
Sbjct: 67  SDTIYRVSRRKIPAGPNPLHN 87


>ref|XP_002509756.1| conserved hypothetical protein [Ricinus communis]
           gi|223549655|gb|EEF51143.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 90

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/79 (41%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
 Frame = -2

Query: 425 LFIMVMLSFTQLSNCRDIHRS------TTEGTTTQMKPGLHSSSSFPAEAPVAVNNPHTD 264
           L I+++L+ + LS+CR +H +        +  TT + P L     FPA +P A      D
Sbjct: 14  LLIVIILAVSHLSSCRHLHTNIGVDDQAKKTPTTLLPPQL--VWHFPATSPEASAKDQID 71

Query: 263 PIYGMSERTVPGGPNPLHN 207
            +YG+S RTVPGGPNPLHN
Sbjct: 72  AVYGVSLRTVPGGPNPLHN 90


>gb|ADW77269.1| CLE15 protein [Glycine max]
          Length = 87

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
 Frame = -2

Query: 455 MGNQYPGVSFLFIMVMLSFTQLSNCRDIHRSTTEGTTTQMK--PGLHSSSS--FPAEAPV 288
           M  +Y  +SFL +M++L  +QLS+C +  R  ++    + K  P    S S  F  +   
Sbjct: 1   MAVRYSRLSFLILMIILMISQLSSCCEAGRWMSKEIKQKEKNTPSQQFSISWHFYTKTQQ 60

Query: 287 AVNNPHTDPIYGMSERTVPGGPNPLHN 207
             +     PIYG+S R VPGGPNPLHN
Sbjct: 61  VPSTEEVHPIYGVSLRDVPGGPNPLHN 87


Top