BLASTX nr result

ID: Cnidium21_contig00035474 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035474
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK07753.1| predicted protein [Hordeum vulgare subsp. vulgare]     38   4e-06

>dbj|BAK07753.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 290

 Score = 37.7 bits (86), Expect(2) = 4e-06
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +3

Query: 231 SCPKCRGICNCSCCR 275
           +CPKCRGICNCS CR
Sbjct: 113 TCPKCRGICNCSFCR 127



 Score = 37.7 bits (86), Expect(2) = 4e-06
 Identities = 17/29 (58%), Positives = 21/29 (72%)
 Frame = +2

Query: 353 RKKRGQLPASIPCHRANATGYSSVSELLR 439
           RKK+G+ P  I  H A ATG+SSV ELL+
Sbjct: 127 RKKKGETPTGILAHAAKATGHSSVHELLK 155


Top