BLASTX nr result

ID: Cnidium21_contig00035466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035466
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521670.1| PREDICTED: importin subunit alpha-1-like [Gl...    59   4e-07
ref|XP_003626176.1| Importin subunit alpha [Medicago truncatula]...    59   4e-07
ref|XP_003554623.1| PREDICTED: importin subunit alpha-1b-like [G...    58   9e-07
gb|EGG14258.1| putative importin subunit alpha B [Dictyostelium ...    58   9e-07
ref|XP_002680607.1| predicted protein [Naegleria gruberi] gi|284...    57   1e-06

>ref|XP_003521670.1| PREDICTED: importin subunit alpha-1-like [Glycine max]
          Length = 532

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 35/88 (39%), Positives = 49/88 (55%)
 Frame = -3

Query: 361 CWILSNITARKQVFLKDVIRCECIESLVSVVQNFKCIEGRKEAAWAILNAICGASDEHII 182
           CW +SNITA  +  ++DVI    I  LV ++QN +  + +KEAAWAI NA  G S E I 
Sbjct: 350 CWTISNITAGNKKQIQDVIEASIIAPLVHLLQNAE-FDIKKEAAWAISNATSGGSHEQIK 408

Query: 181 EFLRKSCVRALWNFPTVFSGDLNIVYTC 98
             + + C+R L +   +   D  IV  C
Sbjct: 409 FLVSQGCIRPLCDL--LICPDPRIVTVC 434


>ref|XP_003626176.1| Importin subunit alpha [Medicago truncatula]
           gi|355501191|gb|AES82394.1| Importin subunit alpha
           [Medicago truncatula]
          Length = 563

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 37/101 (36%), Positives = 53/101 (52%)
 Frame = -3

Query: 400 LIREEHKYFVMYGCWILSNITARKQVFLKDVIRCECIESLVSVVQNFKCIEGRKEAAWAI 221
           LI    K      CW +SNITA  +  ++DVI    I  LV+++QN +  + +KEAAWAI
Sbjct: 337 LINSYKKSIKKEACWTISNITAGNKQQIQDVIDANIIAPLVNLLQNAE-FDIKKEAAWAI 395

Query: 220 LNAICGASDEHIIEFLRKSCVRALWNFPTVFSGDLNIVYTC 98
            NA  G S E +   + + C++ L +  T    D  IV  C
Sbjct: 396 SNATSGGSHEQLKYLVSQGCIKPLCDLLT--CPDPRIVTVC 434


>ref|XP_003554623.1| PREDICTED: importin subunit alpha-1b-like [Glycine max]
          Length = 532

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 34/88 (38%), Positives = 49/88 (55%)
 Frame = -3

Query: 361 CWILSNITARKQVFLKDVIRCECIESLVSVVQNFKCIEGRKEAAWAILNAICGASDEHII 182
           CW +SNITA  +  ++DVI    I  LV ++QN +  + +KEAAWAI NA  G S E I 
Sbjct: 350 CWTISNITAGNKKQIQDVIEASIIAPLVHLLQNAE-FDIKKEAAWAISNATSGGSHEQIK 408

Query: 181 EFLRKSCVRALWNFPTVFSGDLNIVYTC 98
             + + C++ L +   +   D  IV  C
Sbjct: 409 FLVSQGCIKPLCDL--LICPDPRIVTVC 434


>gb|EGG14258.1| putative importin subunit alpha B [Dictyostelium fasciculatum]
          Length = 511

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 32/84 (38%), Positives = 48/84 (57%)
 Frame = -3

Query: 400 LIREEHKYFVMYGCWILSNITARKQVFLKDVIRCECIESLVSVVQNFKCIEGRKEAAWAI 221
           L+    K      CW +SNITA  +  ++DVI    I +LV++++N +  E +KEAAWAI
Sbjct: 323 LLTNPKKAIKKEACWTISNITAGNKKQIQDVIDANIIPALVNLLKNAE-FEIKKEAAWAI 381

Query: 220 LNAICGASDEHIIEFLRKSCVRAL 149
            NA  G S + I   +R+ C+  L
Sbjct: 382 SNATSGGSPQQIEYLVRQGCIPPL 405


>ref|XP_002680607.1| predicted protein [Naegleria gruberi] gi|284094228|gb|EFC47863.1|
           predicted protein [Naegleria gruberi]
          Length = 518

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/84 (34%), Positives = 46/84 (54%)
 Frame = -3

Query: 400 LIREEHKYFVMYGCWILSNITARKQVFLKDVIRCECIESLVSVVQNFKCIEGRKEAAWAI 221
           L++ + K      CW +SNITA  +  ++ +I    I  LV+++      + +KEAAWAI
Sbjct: 328 LLQHQKKSIKKEACWTISNITAGNKDQIQTIIDANIIPPLVAILDQPGDFDVKKEAAWAI 387

Query: 220 LNAICGASDEHIIEFLRKSCVRAL 149
            NA  G SDE I   + + C++ L
Sbjct: 388 SNATSGGSDEQIRYLVDRGCIKPL 411


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