BLASTX nr result

ID: Cnidium21_contig00035421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035421
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD32595.1| HAT dimerisation [Medicago truncatula]                 103   3e-20
gb|AAV32822.1| transposase [Zea mays]                                 103   4e-20
gb|ADN33918.1| transposase [Cucumis melo subsp. melo]                 103   4e-20
emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]   100   4e-19
ref|XP_003591965.1| Elongation factor 1-alpha [Medicago truncatu...    99   9e-19

>gb|ABD32595.1| HAT dimerisation [Medicago truncatula]
          Length = 132

 Score =  103 bits (257), Expect = 3e-20
 Identities = 51/105 (48%), Positives = 73/105 (69%), Gaps = 1/105 (0%)
 Frame = +2

Query: 59  SELERYLNE-RVEVSEGFDILNWWKANSKNFPRLSKMANEVLAIPVSTVSSESAFSTCGR 235
           +E++ YL+E R + +  FDILNWWK NS  +P    ++ ++LA+P+STV+SESAFST GR
Sbjct: 10  TEVDIYLSESREKKNPDFDILNWWKVNSTKYPTHGLISRDILAMPISTVASESAFSTGGR 69

Query: 236 VLDAYWCSLAPKTMEALICSRNWLHLPQGTIDLSELLSDVTKRED 370
           VL  Y  SL   T+EALIC++NWL     ++D+ E L D+ K E+
Sbjct: 70  VLSCYRSSLTTHTVEALICAQNWLRSSPLSVDIEEQLEDLEKLEE 114


>gb|AAV32822.1| transposase [Zea mays]
          Length = 674

 Score =  103 bits (256), Expect = 4e-20
 Identities = 53/109 (48%), Positives = 80/109 (73%), Gaps = 3/109 (2%)
 Frame = +2

Query: 53  NTSELERYLNERVEVSE-GFDILNWWKANSKNFPRLSKMANEVLAIPVSTVSSESAFSTC 229
           N SEL++YL E  E +E   D+L WWKA+ + FP LS++A +VLAIP+S+V+SESAFST 
Sbjct: 534 NKSELDKYLAEETEDTEMKLDLLVWWKASEQRFPILSRLARDVLAIPISSVASESAFSTG 593

Query: 230 GRVLDAYWCSLAPKTMEALICSRNWLH--LPQGTIDLSELLSDVTKRED 370
           GR+LD +  SL P  +E+L+C+++WL   +P   ID++E + ++TK E+
Sbjct: 594 GRILDDFRSSLTPFMLESLVCTQDWLRWTIP---IDITENIEELTKLEE 639


>gb|ADN33918.1| transposase [Cucumis melo subsp. melo]
          Length = 245

 Score =  103 bits (256), Expect = 4e-20
 Identities = 56/109 (51%), Positives = 72/109 (66%), Gaps = 1/109 (0%)
 Frame = +2

Query: 44  FFGNTSELERYLNERVEVSEG-FDILNWWKANSKNFPRLSKMANEVLAIPVSTVSSESAF 220
           F   +SE++ YL E    +EG FDIL WWK NS  F  L  MA ++LAI VSTV+SES F
Sbjct: 111 FEQGSSEVDIYLLEANVRTEGDFDILQWWKMNSDRFEVLGHMARDILAISVSTVASESTF 170

Query: 221 STCGRVLDAYWCSLAPKTMEALICSRNWLHLPQGTIDLSELLSDVTKRE 367
           ST GRV+D+  CSLAPKT+EALIC++NWL+     +     L + +K E
Sbjct: 171 STGGRVVDSSHCSLAPKTVEALICTQNWLNFDPIHLQFQHELKEASKFE 219


>emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]
          Length = 563

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 53/110 (48%), Positives = 76/110 (69%), Gaps = 1/110 (0%)
 Frame = +2

Query: 59  SELERYLNERVE-VSEGFDILNWWKANSKNFPRLSKMANEVLAIPVSTVSSESAFSTCGR 235
           SEL+ YL+E  E V +GFDIL+WWK N   F  L+++A +VLAIP+STV+ ES FST GR
Sbjct: 446 SELDWYLSESNERVDDGFDILHWWKVNCSKFKVLAQIAKDVLAIPISTVAFESKFSTGGR 505

Query: 236 VLDAYWCSLAPKTMEALICSRNWLHLPQGTIDLSELLSDVTKREDIAEDL 385
           +LD +  SL+PKT+E LIC +N L      I+L E + ++   E++ +D+
Sbjct: 506 ILDPFRSSLSPKTVEMLICGQNRLRSSPIPINLRETMEEI---ENLEQDI 552


>ref|XP_003591965.1| Elongation factor 1-alpha [Medicago truncatula]
           gi|355481013|gb|AES62216.1| Elongation factor 1-alpha
           [Medicago truncatula]
          Length = 1001

 Score = 98.6 bits (244), Expect = 9e-19
 Identities = 46/83 (55%), Positives = 62/83 (74%)
 Frame = +2

Query: 59  SELERYLNERVEVSEGFDILNWWKANSKNFPRLSKMANEVLAIPVSTVSSESAFSTCGRV 238
           +EL  YLNE +E +   ++L WWK NS  +P L+K+A +VLAIP++TV+SES FST  RV
Sbjct: 565 NELNTYLNESLERNMEINVLEWWKVNSGRYPILAKIARDVLAIPITTVASESTFSTSERV 624

Query: 239 LDAYWCSLAPKTMEALICSRNWL 307
           LD Y  SL P T+EALIC+++WL
Sbjct: 625 LDPYRSSLTPTTIEALICTQDWL 647


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