BLASTX nr result

ID: Cnidium21_contig00035420 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035420
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277376.1| PREDICTED: uncharacterized protein LOC100262...   101   8e-20
emb|CBI33855.3| unnamed protein product [Vitis vinifera]              101   8e-20
ref|XP_002326535.1| predicted protein [Populus trichocarpa] gi|2...    91   8e-17
ref|XP_004136196.1| PREDICTED: E3 ubiquitin-protein ligase RNF14...    83   3e-14
ref|XP_003612847.1| E3 ubiquitin-protein ligase RNF14 [Medicago ...    78   7e-13

>ref|XP_002277376.1| PREDICTED: uncharacterized protein LOC100262589 [Vitis vinifera]
          Length = 868

 Score =  101 bits (251), Expect = 8e-20
 Identities = 72/190 (37%), Positives = 109/190 (57%), Gaps = 12/190 (6%)
 Frame = -1

Query: 535 IKAATNMSNSRQTLKNQXXXXSKPTKNSHFH-----RPKSKWVPRNTPA---KST----P 392
           +K++ +  +   T  ++     +PT +S FH     RP SKWV RN  A   K+T     
Sbjct: 228 LKSSLHNQSQPDTTSHENLQSPQPTHDSDFHPKSQSRPNSKWVSRNQRAHVAKTTFVKKS 287

Query: 391 EVGSCQKMENCIGCDEEIVKDKGGEQLEKNSNNGLECNDDLNVKMIPNSIDFCSEKRGNI 212
           EVGS  ++       +E  + K GE+ E       +   DLN +++  S DF  +     
Sbjct: 288 EVGSGSEVNEQ---KQEEDEQKQGEEEEGEGPRNEQT--DLNEEVVEAS-DFTHDVD--- 338

Query: 211 DIMSRLEELRLGETEVELSQEILCINDQLQQDELIAVESIYGENLVVSDKQSGLRCFQIH 32
           D+ SRLE+L +G  E ELS++ L IN QLQ+DEL+A++SIYG+N+ + D+Q GL+ FQIH
Sbjct: 339 DVGSRLEKLVVGVEEPELSEDRLRINAQLQEDELLAMQSIYGDNVFILDRQQGLQSFQIH 398

Query: 31  VHIESPKDIT 2
           VHIE+  ++T
Sbjct: 399 VHIEALGELT 408


>emb|CBI33855.3| unnamed protein product [Vitis vinifera]
          Length = 662

 Score =  101 bits (251), Expect = 8e-20
 Identities = 72/190 (37%), Positives = 109/190 (57%), Gaps = 12/190 (6%)
 Frame = -1

Query: 535 IKAATNMSNSRQTLKNQXXXXSKPTKNSHFH-----RPKSKWVPRNTPA---KST----P 392
           +K++ +  +   T  ++     +PT +S FH     RP SKWV RN  A   K+T     
Sbjct: 22  LKSSLHNQSQPDTTSHENLQSPQPTHDSDFHPKSQSRPNSKWVSRNQRAHVAKTTFVKKS 81

Query: 391 EVGSCQKMENCIGCDEEIVKDKGGEQLEKNSNNGLECNDDLNVKMIPNSIDFCSEKRGNI 212
           EVGS  ++       +E  + K GE+ E       +   DLN +++  S DF  +     
Sbjct: 82  EVGSGSEVNEQ---KQEEDEQKQGEEEEGEGPRNEQT--DLNEEVVEAS-DFTHDVD--- 132

Query: 211 DIMSRLEELRLGETEVELSQEILCINDQLQQDELIAVESIYGENLVVSDKQSGLRCFQIH 32
           D+ SRLE+L +G  E ELS++ L IN QLQ+DEL+A++SIYG+N+ + D+Q GL+ FQIH
Sbjct: 133 DVGSRLEKLVVGVEEPELSEDRLRINAQLQEDELLAMQSIYGDNVFILDRQQGLQSFQIH 192

Query: 31  VHIESPKDIT 2
           VHIE+  ++T
Sbjct: 193 VHIEALGELT 202


>ref|XP_002326535.1| predicted protein [Populus trichocarpa] gi|222833857|gb|EEE72334.1|
           predicted protein [Populus trichocarpa]
          Length = 642

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 57/153 (37%), Positives = 83/153 (54%), Gaps = 5/153 (3%)
 Frame = -1

Query: 445 HRPKSKWV-----PRNTPAKSTPEVGSCQKMENCIGCDEEIVKDKGGEQLEKNSNNGLEC 281
           H+P +  V     P++ P  S+ EVG+    E      E+ + +   E++E+        
Sbjct: 55  HKPSNSQVVSLNSPKSDPPSSSTEVGASSFGEKVNENMEKHLHETKKEEIEEKKEESEPD 114

Query: 280 NDDLNVKMIPNSIDFCSEKRGNIDIMSRLEELRLGETEVELSQEILCINDQLQQDELIAV 101
           N         N +D          +++RLEE  LG  E ELS+E L INDQLQ+DEL+A+
Sbjct: 115 NG--------NGVD---------GVVTRLEEFFLGVEEPELSEEQLRINDQLQEDELLAM 157

Query: 100 ESIYGENLVVSDKQSGLRCFQIHVHIESPKDIT 2
           ESIYG+N  + ++Q GLR FQIH+HIE P + T
Sbjct: 158 ESIYGDNTFILERQRGLRSFQIHIHIEVPAEFT 190


>ref|XP_004136196.1| PREDICTED: E3 ubiquitin-protein ligase RNF14-like [Cucumis sativus]
           gi|449525814|ref|XP_004169911.1| PREDICTED: E3
           ubiquitin-protein ligase RNF14-like [Cucumis sativus]
          Length = 638

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 41/70 (58%), Positives = 53/70 (75%)
 Frame = -1

Query: 211 DIMSRLEELRLGETEVELSQEILCINDQLQQDELIAVESIYGENLVVSDKQSGLRCFQIH 32
           D+ SRLE L+    E ELS+E L IN+QLQ+DEL+A+ESIYGEN+ + D+  G R FQI 
Sbjct: 113 DVYSRLEMLQRSSEEPELSEEQLSINNQLQEDELLALESIYGENVYILDEYKGQRRFQIF 172

Query: 31  VHIESPKDIT 2
           +HIE+P DIT
Sbjct: 173 IHIENPGDIT 182


>ref|XP_003612847.1| E3 ubiquitin-protein ligase RNF14 [Medicago truncatula]
           gi|355514182|gb|AES95805.1| E3 ubiquitin-protein ligase
           RNF14 [Medicago truncatula]
          Length = 630

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 51/150 (34%), Positives = 82/150 (54%), Gaps = 3/150 (2%)
 Frame = -1

Query: 460 KNSHFHRPKSK--WVPRNTPAKSTPEVGSCQKMENCIGCDEEIVKDKGGEQLEKNSNNGL 287
           K+   HR KSK  +V ++    S+P         N +  ++ +  +   + +  N+NN +
Sbjct: 27  KSQQQHRTKSKLRYVNKSELIVSSP---------NSVAVEQPVSSE---DVIVNNNNNTV 74

Query: 286 ECNDDLNVKMIPNSIDFCSEKRGN-IDIMSRLEELRLGETEVELSQEILCINDQLQQDEL 110
           +     +        D+ +    N +D  +RL++L     ++ELS+E + INDQLQQDEL
Sbjct: 75  DDVASSSKTKTKEEYDYDNNDIDNGMDNTNRLDKLLTDIQQIELSEEEITINDQLQQDEL 134

Query: 109 IAVESIYGENLVVSDKQSGLRCFQIHVHIE 20
           + VESIYGEN+   D   GLRCFQIH++I+
Sbjct: 135 LVVESIYGENVFSLDTWKGLRCFQIHINID 164


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