BLASTX nr result

ID: Cnidium21_contig00035419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035419
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320601.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31
ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containi...   137   1e-30
ref|XP_002865693.1| pentatricopeptide repeat-containing protein ...   137   1e-30
ref|NP_199702.1| pentatricopeptide repeat-containing protein [Ar...   136   2e-30
emb|CBI29241.3| unnamed protein product [Vitis vinifera]              135   3e-30

>ref|XP_002320601.1| predicted protein [Populus trichocarpa] gi|222861374|gb|EEE98916.1|
           predicted protein [Populus trichocarpa]
          Length = 629

 Score =  139 bits (349), Expect = 3e-31
 Identities = 59/74 (79%), Positives = 69/74 (93%)
 Frame = -1

Query: 461 SALHYHSEKIALAFGLISTSPGTPLRIVKNLRICHDCHSTMKLISRLYKRKIVIRDRKRF 282
           SALHYHSEKIA+AFGLIST P TPL+IVKNLR+C DCHS++KL+S++Y RKI++RDRKRF
Sbjct: 556 SALHYHSEKIAIAFGLISTRPQTPLQIVKNLRVCEDCHSSIKLVSKIYNRKIIVRDRKRF 615

Query: 281 HHFENGLCSCMDYW 240
           HHFENG CSCMDYW
Sbjct: 616 HHFENGSCSCMDYW 629


>ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Glycine max]
          Length = 638

 Score =  137 bits (344), Expect = 1e-30
 Identities = 62/74 (83%), Positives = 68/74 (91%)
 Frame = -1

Query: 461 SALHYHSEKIALAFGLISTSPGTPLRIVKNLRICHDCHSTMKLISRLYKRKIVIRDRKRF 282
           S LHYHSEKIA+AFGLIST P TPL IVKNLRIC DCHS+MKLIS++Y+RKIVIRDRKRF
Sbjct: 565 SVLHYHSEKIAVAFGLISTPPKTPLCIVKNLRICEDCHSSMKLISKMYERKIVIRDRKRF 624

Query: 281 HHFENGLCSCMDYW 240
           HHFE+G CSCMDYW
Sbjct: 625 HHFEHGSCSCMDYW 638


>ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297311528|gb|EFH41952.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 640

 Score =  137 bits (344), Expect = 1e-30
 Identities = 59/74 (79%), Positives = 69/74 (93%)
 Frame = -1

Query: 461 SALHYHSEKIALAFGLISTSPGTPLRIVKNLRICHDCHSTMKLISRLYKRKIVIRDRKRF 282
           +ALHYHSEK+A AFGLISTSPG P+RIVKNLRIC DCHS++KLIS++YKRKI +RDRKRF
Sbjct: 567 NALHYHSEKMATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRF 626

Query: 281 HHFENGLCSCMDYW 240
           HHF++G CSCMDYW
Sbjct: 627 HHFQDGSCSCMDYW 640


>ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g48910 gi|10177180|dbj|BAB10314.1| selenium-binding
           protein-like [Arabidopsis thaliana]
           gi|15810559|gb|AAL07167.1| putative selenium-binding
           protein [Arabidopsis thaliana]
           gi|332008359|gb|AED95742.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 646

 Score =  136 bits (343), Expect = 2e-30
 Identities = 59/74 (79%), Positives = 68/74 (91%)
 Frame = -1

Query: 461 SALHYHSEKIALAFGLISTSPGTPLRIVKNLRICHDCHSTMKLISRLYKRKIVIRDRKRF 282
           + LHYHSEKIA AFGLISTSPG P+RIVKNLRIC DCHS++KLIS++YKRKI +RDRKRF
Sbjct: 573 NVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRF 632

Query: 281 HHFENGLCSCMDYW 240
           HHF++G CSCMDYW
Sbjct: 633 HHFQDGSCSCMDYW 646


>emb|CBI29241.3| unnamed protein product [Vitis vinifera]
          Length = 514

 Score =  135 bits (340), Expect = 3e-30
 Identities = 59/74 (79%), Positives = 68/74 (91%)
 Frame = -1

Query: 461 SALHYHSEKIALAFGLISTSPGTPLRIVKNLRICHDCHSTMKLISRLYKRKIVIRDRKRF 282
           S+L+YHSEKIA+AFGLIST P TPLRI KNLRIC DCHS++KLIS++YKRKI++RDRKRF
Sbjct: 441 SSLNYHSEKIAIAFGLISTQPQTPLRITKNLRICEDCHSSIKLISKIYKRKIIVRDRKRF 500

Query: 281 HHFENGLCSCMDYW 240
           HHF NG CSCMDYW
Sbjct: 501 HHFVNGSCSCMDYW 514


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