BLASTX nr result
ID: Cnidium21_contig00035419
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00035419 (464 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002320601.1| predicted protein [Populus trichocarpa] gi|2... 139 3e-31 ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containi... 137 1e-30 ref|XP_002865693.1| pentatricopeptide repeat-containing protein ... 137 1e-30 ref|NP_199702.1| pentatricopeptide repeat-containing protein [Ar... 136 2e-30 emb|CBI29241.3| unnamed protein product [Vitis vinifera] 135 3e-30 >ref|XP_002320601.1| predicted protein [Populus trichocarpa] gi|222861374|gb|EEE98916.1| predicted protein [Populus trichocarpa] Length = 629 Score = 139 bits (349), Expect = 3e-31 Identities = 59/74 (79%), Positives = 69/74 (93%) Frame = -1 Query: 461 SALHYHSEKIALAFGLISTSPGTPLRIVKNLRICHDCHSTMKLISRLYKRKIVIRDRKRF 282 SALHYHSEKIA+AFGLIST P TPL+IVKNLR+C DCHS++KL+S++Y RKI++RDRKRF Sbjct: 556 SALHYHSEKIAIAFGLISTRPQTPLQIVKNLRVCEDCHSSIKLVSKIYNRKIIVRDRKRF 615 Query: 281 HHFENGLCSCMDYW 240 HHFENG CSCMDYW Sbjct: 616 HHFENGSCSCMDYW 629 >ref|XP_003537434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g48910-like [Glycine max] Length = 638 Score = 137 bits (344), Expect = 1e-30 Identities = 62/74 (83%), Positives = 68/74 (91%) Frame = -1 Query: 461 SALHYHSEKIALAFGLISTSPGTPLRIVKNLRICHDCHSTMKLISRLYKRKIVIRDRKRF 282 S LHYHSEKIA+AFGLIST P TPL IVKNLRIC DCHS+MKLIS++Y+RKIVIRDRKRF Sbjct: 565 SVLHYHSEKIAVAFGLISTPPKTPLCIVKNLRICEDCHSSMKLISKMYERKIVIRDRKRF 624 Query: 281 HHFENGLCSCMDYW 240 HHFE+G CSCMDYW Sbjct: 625 HHFEHGSCSCMDYW 638 >ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 640 Score = 137 bits (344), Expect = 1e-30 Identities = 59/74 (79%), Positives = 69/74 (93%) Frame = -1 Query: 461 SALHYHSEKIALAFGLISTSPGTPLRIVKNLRICHDCHSTMKLISRLYKRKIVIRDRKRF 282 +ALHYHSEK+A AFGLISTSPG P+RIVKNLRIC DCHS++KLIS++YKRKI +RDRKRF Sbjct: 567 NALHYHSEKMATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRF 626 Query: 281 HHFENGLCSCMDYW 240 HHF++G CSCMDYW Sbjct: 627 HHFQDGSCSCMDYW 640 >ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910 gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana] gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana] gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 646 Score = 136 bits (343), Expect = 2e-30 Identities = 59/74 (79%), Positives = 68/74 (91%) Frame = -1 Query: 461 SALHYHSEKIALAFGLISTSPGTPLRIVKNLRICHDCHSTMKLISRLYKRKIVIRDRKRF 282 + LHYHSEKIA AFGLISTSPG P+RIVKNLRIC DCHS++KLIS++YKRKI +RDRKRF Sbjct: 573 NVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRF 632 Query: 281 HHFENGLCSCMDYW 240 HHF++G CSCMDYW Sbjct: 633 HHFQDGSCSCMDYW 646 >emb|CBI29241.3| unnamed protein product [Vitis vinifera] Length = 514 Score = 135 bits (340), Expect = 3e-30 Identities = 59/74 (79%), Positives = 68/74 (91%) Frame = -1 Query: 461 SALHYHSEKIALAFGLISTSPGTPLRIVKNLRICHDCHSTMKLISRLYKRKIVIRDRKRF 282 S+L+YHSEKIA+AFGLIST P TPLRI KNLRIC DCHS++KLIS++YKRKI++RDRKRF Sbjct: 441 SSLNYHSEKIAIAFGLISTQPQTPLRITKNLRICEDCHSSIKLISKIYKRKIIVRDRKRF 500 Query: 281 HHFENGLCSCMDYW 240 HHF NG CSCMDYW Sbjct: 501 HHFVNGSCSCMDYW 514