BLASTX nr result

ID: Cnidium21_contig00035416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035416
         (678 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002890553.1| hypothetical protein ARALYDRAFT_472555 [Arab...    78   1e-12
ref|NP_173718.1| hydroxyproline-rich glycoprotein family protein...    75   1e-11
ref|XP_002315884.1| predicted protein [Populus trichocarpa] gi|2...    75   1e-11
ref|XP_002888810.1| hypothetical protein ARALYDRAFT_476228 [Arab...    73   5e-11
ref|NP_565006.1| hydroxyproline-rich glycoprotein family protein...    73   5e-11

>ref|XP_002890553.1| hypothetical protein ARALYDRAFT_472555 [Arabidopsis lyrata subsp.
           lyrata] gi|297336395|gb|EFH66812.1| hypothetical protein
           ARALYDRAFT_472555 [Arabidopsis lyrata subsp. lyrata]
          Length = 158

 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 34/57 (59%), Positives = 42/57 (73%), Gaps = 6/57 (10%)
 Frame = +1

Query: 250 YPPPTGLLPNYPSPPYL------MNGVTPPAPDSLVPWFPYYYKKPPHGTDQSSSSS 402
           YPPP G +P+YPSPPY        N   PP PD+++P+FPYYY+KPPH TDQ+SSSS
Sbjct: 74  YPPPVGNIPDYPSPPYGGGDGSGSNFYGPPPPDAILPYFPYYYRKPPHQTDQTSSSS 130


>ref|NP_173718.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis
           thaliana] gi|2462821|gb|AAB72156.1| hypothetical protein
           [Arabidopsis thaliana] gi|2829906|gb|AAC00614.1|
           Hypothetical protein [Arabidopsis thaliana]
           gi|38454056|gb|AAR20722.1| At1g23050 [Arabidopsis
           thaliana] gi|38603998|gb|AAR24742.1| At1g23050
           [Arabidopsis thaliana] gi|332192206|gb|AEE30327.1|
           hydroxyproline-rich glycoprotein family protein
           [Arabidopsis thaliana]
          Length = 161

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 32/57 (56%), Positives = 42/57 (73%), Gaps = 6/57 (10%)
 Frame = +1

Query: 250 YPPPTGLLPNYPSPPYLMNGVT------PPAPDSLVPWFPYYYKKPPHGTDQSSSSS 402
           YPPP G +PNYPSPPY     +      PP P++++P+FPYY++KPPH TDQ+SSSS
Sbjct: 74  YPPPVGNIPNYPSPPYGGGDSSGSSFYGPPPPNAILPYFPYYFRKPPHQTDQTSSSS 130


>ref|XP_002315884.1| predicted protein [Populus trichocarpa] gi|222864924|gb|EEF02055.1|
           predicted protein [Populus trichocarpa]
          Length = 142

 Score = 75.1 bits (183), Expect = 1e-11
 Identities = 35/66 (53%), Positives = 45/66 (68%), Gaps = 4/66 (6%)
 Frame = +1

Query: 220 SPPSLTGGSF----YPPPTGLLPNYPSPPYLMNGVTPPAPDSLVPWFPYYYKKPPHGTDQ 387
           SPPS + G+F    YP PTG LP Y  PP+  N   PP PD ++P+FP+YY+KPPH  D 
Sbjct: 53  SPPSQSAGTFSPPLYPSPTGNLPYYYPPPFGNNFNGPPPPDPILPYFPFYYRKPPHQDDV 112

Query: 388 SSSSSL 405
           SS++SL
Sbjct: 113 SSATSL 118


>ref|XP_002888810.1| hypothetical protein ARALYDRAFT_476228 [Arabidopsis lyrata subsp.
           lyrata] gi|297334651|gb|EFH65069.1| hypothetical protein
           ARALYDRAFT_476228 [Arabidopsis lyrata subsp. lyrata]
          Length = 135

 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 37/66 (56%), Positives = 45/66 (68%), Gaps = 8/66 (12%)
 Frame = +1

Query: 226 PSLTGGSFYPPPTGL-LPNYPSPPYL-------MNGVTPPAPDSLVPWFPYYYKKPPHGT 381
           P  TG  +YPPP+   +PNYPSPPY         NG  PP PD ++P+FP+YY+KPPH T
Sbjct: 52  PQPTG--YYPPPSSSNVPNYPSPPYYGGSPGGGYNG--PPPPDPILPYFPFYYRKPPHQT 107

Query: 382 DQSSSS 399
           DQSSSS
Sbjct: 108 DQSSSS 113


>ref|NP_565006.1| hydroxyproline-rich glycoprotein family protein [Arabidopsis
           thaliana] gi|21536546|gb|AAM60878.1| unknown
           [Arabidopsis thaliana] gi|332197026|gb|AEE35147.1|
           hydroxyproline-rich glycoprotein family protein
           [Arabidopsis thaliana]
          Length = 135

 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 35/64 (54%), Positives = 44/64 (68%), Gaps = 6/64 (9%)
 Frame = +1

Query: 226 PSLTGGSFYPPPTGL-LPNYPSPPYLMNGVT-----PPAPDSLVPWFPYYYKKPPHGTDQ 387
           P  TG  +YPPP+   +PNYPSPPY     +     PP PD ++P+FP+YY+KPPH TDQ
Sbjct: 52  PQPTG--YYPPPSSSNVPNYPSPPYYGGNPSGGYNGPPPPDPILPYFPFYYRKPPHQTDQ 109

Query: 388 SSSS 399
           SSSS
Sbjct: 110 SSSS 113


Top