BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035411
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB45089.1| putative polyprotein [Solanum habrochaites]            254   1e-65
emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]   253   3e-65
emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]   247   2e-63
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...   246   3e-63
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...   244   1e-62

>gb|ACB45089.1| putative polyprotein [Solanum habrochaites]
          Length = 849

 Score =  254 bits (650), Expect = 1e-65
 Identities = 122/238 (51%), Positives = 159/238 (66%), Gaps = 2/238 (0%)
 Frame = +1

Query: 10   AKQCRLPFSISAHRASSYFELIHCDLWGPYRTPTHTGCKYFLTIIDDHTRAIWTILVPTK 189
            AKQ RLPF  S  RA + F+LIH D+WGPY+ PTH G +YFLT++DD +R IW  L+  K
Sbjct: 302  AKQTRLPFPQSPTRADNVFDLIHADVWGPYKFPTHDGNRYFLTLVDDCSRMIWIFLLKYK 361

Query: 190  QHVIQTVKDFCSYVFTQFHCHIKCIRTDNGGEFVNSDLSAFLITSGIIHQTSCPYTPQQN 369
              V   +KDF   +  QF  +IK  R+DNG EF NS  S    T+GI+HQ+SC YTPQQN
Sbjct: 362  SDVFIVLKDFLQLIQRQFGGYIKIFRSDNGTEFFNSHCSELFRTAGIVHQSSCVYTPQQN 421

Query: 370  GRVERKHRNLLEMTRALRFQSKLPKNFWGDCLLTSTYLINRLPNSVLGFISPYEKLFLKS 549
            G VER+HR +LE+ RA+RFQ+ LP  FWG C+  + YLINR+P++ L   SP+   F K 
Sbjct: 422  GVVERRHRQILEVARAIRFQANLPIRFWGLCVQNAVYLINRIPSTALSGRSPFAVFFGKE 481

Query: 550  PSYQHLKVFGCLAYMSQHLQ--DKLEARAVKTIFIGYSPHQKGYKLYDPVNHSFYVSR 717
            PS  HL+V GCL Y   H    DK + R++K++ +GYS  QKGYKLYD    +F++SR
Sbjct: 482  PSLHHLRVMGCLCYAVNHHTHGDKFDTRSIKSVLMGYSTTQKGYKLYDLSTQTFFISR 539


>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
          Length = 1535

 Score =  253 bits (646), Expect = 3e-65
 Identities = 121/237 (51%), Positives = 163/237 (68%), Gaps = 1/237 (0%)
 Frame = +1

Query: 10   AKQCRLPFSISAHRASSYFELIHCDLWGPYRTPTHTGCKYFLTIIDDHTRAIWTILVPTK 189
            AKQ RLPF  S   +   F+LIHCD+WG Y+  + +G  YFLTI+DD+TR  W  L+  K
Sbjct: 584  AKQHRLPFGTSEISSEKPFDLIHCDIWGRYKHSSLSGAHYFLTIVDDYTRFTWIFLMKHK 643

Query: 190  QHVIQTVKDFCSYVFTQFHCHIKCIRTDNGGEFVNSDLSAFLITSGIIHQTSCPYTPQQN 369
                  +K F SYV TQF  HIK  R+DNGGEF++  L +F   +G++ Q SC YTPQQN
Sbjct: 644  DEAQPLIKHFFSYVSTQFASHIKIFRSDNGGEFLS--LQSFFKDNGVLFQHSCVYTPQQN 701

Query: 370  GRVERKHRNLLEMTRALRFQSKLPKNFWGDCLLTSTYLINRLPNSVLGFISPYEKLFLKS 549
            G VERKHR++L++ RAL+FQ++LP  FWG+C LT+ ++INRLP+ VL F +P+E+L+LK 
Sbjct: 702  GVVERKHRHILQVARALKFQAQLPTQFWGECALTAVHIINRLPSPVLSFKTPFERLYLKP 761

Query: 550  PSYQHLKVFGCLAYMSQ-HLQDKLEARAVKTIFIGYSPHQKGYKLYDPVNHSFYVSR 717
            P+Y HL+VFGCLAY +  H+  K + RA+  IFIGY   QK YKL++      + SR
Sbjct: 762  PTYSHLRVFGCLAYATNVHVSHKFDHRAIACIFIGYPVGQKAYKLFNLSTRKIFTSR 818


>emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
          Length = 1498

 Score =  247 bits (630), Expect = 2e-63
 Identities = 121/237 (51%), Positives = 159/237 (67%), Gaps = 1/237 (0%)
 Frame = +1

Query: 10   AKQCRLPFSISAHRASSYFELIHCDLWGPYRTPTHTGCKYFLTIIDDHTRAIWTILVPTK 189
            AKQ RLPF  SA  ++  FE+IHCD+WG YR P+  G  YFLTI+DD+TR  W  L+  K
Sbjct: 555  AKQSRLPFGTSAISSTKPFEIIHCDIWGRYRHPSLFGAHYFLTIVDDYTRFTWIFLMRHK 614

Query: 190  QHVIQTVKDFCSYVFTQFHCHIKCIRTDNGGEFVNSDLSAFLITSGIIHQTSCPYTPQQN 369
                  +K F SYVFTQF   IK  R+DN  EF +  L +F   +G+I Q SC YTPQQN
Sbjct: 615  DEAQSLLKRFFSYVFTQFEFRIKTFRSDNXXEFTS--LRSFFQDNGVIFQHSCVYTPQQN 672

Query: 370  GRVERKHRNLLEMTRALRFQSKLPKNFWGDCLLTSTYLINRLPNSVLGFISPYEKLFLKS 549
            G VERKHR++L++ RAL+F +++P  FWG+C LT+ ++INRL + +L F +P+E L+LKS
Sbjct: 673  GVVERKHRHILQVARALKFHAQVPTQFWGECALTAVHIINRLXSPILSFKTPFELLYLKS 732

Query: 550  PSYQHLKVFGCLAYMSQ-HLQDKLEARAVKTIFIGYSPHQKGYKLYDPVNHSFYVSR 717
            P Y HL+VFGCLAY +  H   K + RA+ +IFIGY   QK YKL+D      + SR
Sbjct: 733  PXYSHLRVFGCLAYATNVHTSHKFDYRAMPSIFIGYPVGQKAYKLFDLSTKKVFTSR 789


>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score =  246 bits (628), Expect = 3e-63
 Identities = 117/238 (49%), Positives = 163/238 (68%), Gaps = 2/238 (0%)
 Frame = +1

Query: 10   AKQCRLPFSISAHRASSYFELIHCDLWGPYRTPTHTGCKYFLTIIDDHTRAIWTILVPTK 189
            AKQ R  F +S +R+   F+LIHCD+WGPYRTP+++G +YFLTI+DD++R +W  L+  K
Sbjct: 329  AKQTRDTFPLSDNRSMDSFQLIHCDVWGPYRTPSYSGARYFLTIVDDYSRGVWVYLMTDK 388

Query: 190  QHVIQTVKDFCSYVFTQFHCHIKCIRTDNGGEFVNSDLSAFLITSGIIHQTSCPYTPQQN 369
                + +KDF + V  QF   IK +R+DNG EF+   +  + +  GI H+TSC  TP QN
Sbjct: 389  SETQKHLKDFIALVERQFDTEIKTVRSDNGTEFLC--MREYFLHKGITHETSCVGTPHQN 446

Query: 370  GRVERKHRNLLEMTRALRFQSKLPKNFWGDCLLTSTYLINRLPNSVLGFISPYEKLFLKS 549
            GRVERKHR++L + RALRFQS LP  FWG+C+L++ YLINR P+ +L   SPYE L+  +
Sbjct: 447  GRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTA 506

Query: 550  PSYQHLKVFG--CLAYMSQHLQDKLEARAVKTIFIGYSPHQKGYKLYDPVNHSFYVSR 717
            P+Y HL+VFG  C A+   H  DK  AR+ + +F+GY   QKG++L+D     F+VSR
Sbjct: 507  PNYSHLRVFGSLCYAHNQNHKGDKFVARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSR 564


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
            gi|7269049|emb|CAB79159.1| LTR retrotransposon like
            protein [Arabidopsis thaliana]
          Length = 1109

 Score =  244 bits (623), Expect = 1e-62
 Identities = 116/238 (48%), Positives = 161/238 (67%), Gaps = 2/238 (0%)
 Frame = +1

Query: 10   AKQCRLPFSISAHRASSYFELIHCDLWGPYRTPTHTGCKYFLTIIDDHTRAIWTILVPTK 189
            AKQ R  F +  +R+   F+LIHCD+WGPYRTP+++G +YFLTI+DD++R +W  L+  K
Sbjct: 329  AKQTRDTFPLRDNRSMDSFQLIHCDVWGPYRTPSYSGARYFLTIVDDYSRGVWVYLMTDK 388

Query: 190  QHVIQTVKDFCSYVFTQFHCHIKCIRTDNGGEFVNSDLSAFLITSGIIHQTSCPYTPQQN 369
                + +KDF + V  QF   IK +R+DNG EF+   +  + +  GI H+TSC  TP QN
Sbjct: 389  SETQKHLKDFMALVERQFDTEIKTVRSDNGTEFLC--MREYFLHKGIAHETSCVGTPHQN 446

Query: 370  GRVERKHRNLLEMTRALRFQSKLPKNFWGDCLLTSTYLINRLPNSVLGFISPYEKLFLKS 549
            GRVERKHR++L + RALRFQS LP  FWG+C+L++ YLINR P+ +L   SPYE L+  +
Sbjct: 447  GRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTA 506

Query: 550  PSYQHLKVFG--CLAYMSQHLQDKLEARAVKTIFIGYSPHQKGYKLYDPVNHSFYVSR 717
            P Y HL+VFG  C A+   H  DK  AR+ + +F+GY   QKG++L+D     F+VSR
Sbjct: 507  PKYSHLRVFGSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSR 564