BLASTX nr result

ID: Cnidium21_contig00035375 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035375
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551123.1| PREDICTED: DNA repair protein rhp7-like [Gly...    96   3e-18
ref|XP_002326121.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18
ref|XP_003546506.1| PREDICTED: uncharacterized F-box/LRR-repeat ...    91   1e-16
ref|XP_002516283.1| rad7, putative [Ricinus communis] gi|2235447...    88   8e-16
emb|CBI27815.3| unnamed protein product [Vitis vinifera]               86   4e-15

>ref|XP_003551123.1| PREDICTED: DNA repair protein rhp7-like [Glycine max]
          Length = 675

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/76 (60%), Positives = 61/76 (80%), Gaps = 2/76 (2%)
 Frame = +2

Query: 44  KRF--VPSLLDLSLKVLADNADTIVSLEGVPDSLKRRLGNILCDSRKMNVKVLDLFVRGA 217
           KRF  VPSL +L L++LA+NAD +VSLEGVPD L+R+L  +LCDSRKMN + L+L + G+
Sbjct: 262 KRFFLVPSLQELCLEILANNADAMVSLEGVPDELRRKLSKLLCDSRKMNSRFLELLLSGS 321

Query: 218 PKEIRIKNASWITDSQ 265
           P EIRIK+ SW+T+ Q
Sbjct: 322 PTEIRIKDCSWLTEEQ 337


>ref|XP_002326121.1| predicted protein [Populus trichocarpa] gi|222833314|gb|EEE71791.1|
           predicted protein [Populus trichocarpa]
          Length = 601

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 46/88 (52%), Positives = 59/88 (67%)
 Frame = +2

Query: 2   IRWKPSEDRDKIVSKRFVPSLLDLSLKVLADNADTIVSLEGVPDSLKRRLGNILCDSRKM 181
           I W P  DR    SK  VPSL +L +K+L  NAD I SLE VPD+L+ RL  +LCDSR+M
Sbjct: 447 ITWMPKTDRACKPSKGLVPSLQELCMKILVKNADAIASLEHVPDALRHRLCQLLCDSRRM 506

Query: 182 NVKVLDLFVRGAPKEIRIKNASWITDSQ 265
           N   L L VRG+P EIRI++ SW+ + +
Sbjct: 507 NAHFLALLVRGSPMEIRIRDCSWLAEEE 534


>ref|XP_003546506.1| PREDICTED: uncharacterized F-box/LRR-repeat protein C02F5.7-like
           [Glycine max]
          Length = 541

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/88 (47%), Positives = 58/88 (65%)
 Frame = +2

Query: 2   IRWKPSEDRDKIVSKRFVPSLLDLSLKVLADNADTIVSLEGVPDSLKRRLGNILCDSRKM 181
           I+W P+  R        VPSL ++ LK+L  N D I SLE VPD+L+ RL  +LCDSR++
Sbjct: 116 IKWVPNAKRGNAGVNVSVPSLQEMCLKILVKNVDAIASLESVPDALRHRLSQLLCDSRRI 175

Query: 182 NVKVLDLFVRGAPKEIRIKNASWITDSQ 265
           N   L+L VRG P EIR+++ SW+T+ Q
Sbjct: 176 NGHFLELLVRGTPTEIRLRDCSWLTEEQ 203


>ref|XP_002516283.1| rad7, putative [Ricinus communis] gi|223544769|gb|EEF46285.1| rad7,
           putative [Ricinus communis]
          Length = 765

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 40/88 (45%), Positives = 60/88 (68%)
 Frame = +2

Query: 2   IRWKPSEDRDKIVSKRFVPSLLDLSLKVLADNADTIVSLEGVPDSLKRRLGNILCDSRKM 181
           I W P+ +R    S+  VPSL +L ++++  N D + SL+ VPD+L+ RL  +LCD RKM
Sbjct: 330 ITWVPTRNRQ---SRTCVPSLQELCMRIIVKNVDAVTSLDHVPDALRHRLCQLLCDCRKM 386

Query: 182 NVKVLDLFVRGAPKEIRIKNASWITDSQ 265
           N   LDL VRG+P EIR+K+ SW+++ +
Sbjct: 387 NSSFLDLLVRGSPTEIRVKDCSWMSEEE 414


>emb|CBI27815.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 36/86 (41%), Positives = 57/86 (66%)
 Frame = +2

Query: 8   WKPSEDRDKIVSKRFVPSLLDLSLKVLADNADTIVSLEGVPDSLKRRLGNILCDSRKMNV 187
           W P + +     K   PSL ++ L+VLA N D I SLE +PD+L+ +L  +LCDSR+MN 
Sbjct: 419 WSPRKVKSSECPKPLAPSLQEMCLEVLAQNGDAITSLESIPDALRHKLSQLLCDSRRMNS 478

Query: 188 KVLDLFVRGAPKEIRIKNASWITDSQ 265
            +L+L V G+P E+ +++ SW+T+ +
Sbjct: 479 HILELLVSGSPFEVCVRDCSWLTEEE 504


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