BLASTX nr result

ID: Cnidium21_contig00035357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035357
         (791 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277411.1| PREDICTED: putative RING-H2 finger protein A...   163   5e-38
ref|XP_002277387.1| PREDICTED: putative RING-H2 finger protein A...   162   8e-38
ref|XP_002302627.1| predicted protein [Populus trichocarpa] gi|2...   158   1e-36
ref|XP_002523355.1| RING-H2 finger protein ATL3K, putative [Rici...   154   2e-35
gb|AFK44003.1| unknown [Medicago truncatula]                          144   2e-32

>ref|XP_002277411.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Vitis
           vinifera]
          Length = 334

 Score =  163 bits (412), Expect = 5e-38
 Identities = 87/186 (46%), Positives = 103/186 (55%), Gaps = 1/186 (0%)
 Frame = +1

Query: 235 MDFLKLFFSLSLVCHLTFAANDCPFSMCGNYVLPIRFPFRLASHQPQNCGYPGFDLHCNS 414
           M FL +FF L  V  L  A   CP S CG+    I FPF L   Q QNCGYPGF+L C S
Sbjct: 1   MAFLDIFFFLFSVFPLILARESCPVSRCGSNGCTIGFPFHLVGQQHQNCGYPGFNLSCGS 60

Query: 415 KDLTVLNLPS-GDFILRSINYRAQVVELYDPYKCLPKRLMELSLTGSPFKAAYYQNYTFL 591
            D+TVL LP  G+F +R INY  Q ++LYDP  CLPKRL+   +TGSPF A YY NYTFL
Sbjct: 61  PDITVLRLPYWGEFFVRGINYITQEIQLYDPDNCLPKRLLAFDITGSPFMAEYYLNYTFL 120

Query: 592 SCPPESTTSRFXXXXXXXXXXXXXXXXXXXXXAISLTRCKITETLPIPVSRPDQLGGDFT 771
            CP E T  RF                        ++ C+I  TL +PVS   Q   DF+
Sbjct: 121 ICPSELTRFRFTAIDCLSNSTSSVLATSSMSLVSKMSSCQILTTLAVPVSWHVQNDEDFS 180

Query: 772 SDLSDD 789
           SDL+ D
Sbjct: 181 SDLNSD 186


>ref|XP_002277387.1| PREDICTED: putative RING-H2 finger protein ATL21A [Vitis vinifera]
           gi|297745433|emb|CBI40513.3| unnamed protein product
           [Vitis vinifera]
          Length = 372

 Score =  162 bits (410), Expect = 8e-38
 Identities = 87/186 (46%), Positives = 103/186 (55%), Gaps = 1/186 (0%)
 Frame = +1

Query: 235 MDFLKLFFSLSLVCHLTFAANDCPFSMCGNYVLPIRFPFRLASHQPQNCGYPGFDLHCNS 414
           M FL +FF L  V  L  A   CP S CG+    I FPF L   Q QNCGYPGF+L C S
Sbjct: 1   MAFLDIFFFLFSVFPLILAREACPVSRCGSNGSTIGFPFHLVGQQHQNCGYPGFNLSCGS 60

Query: 415 KDLTVLNLPS-GDFILRSINYRAQVVELYDPYKCLPKRLMELSLTGSPFKAAYYQNYTFL 591
             +TVL LP  G+F +R INY  Q ++LYDP  CLPKRL+   +TGSPF A YY NYTFL
Sbjct: 61  PGITVLRLPYWGEFFVRGINYITQEIQLYDPDNCLPKRLLAFDITGSPFMAEYYLNYTFL 120

Query: 592 SCPPESTTSRFXXXXXXXXXXXXXXXXXXXXXAISLTRCKITETLPIPVSRPDQLGGDFT 771
            CP E T  RF                        ++ C+I  TL +PVS P Q   DF+
Sbjct: 121 ICPSELTRFRFTAIDCLSNSTSSVLATSSMSLVSKMSSCQILTTLAVPVSWPVQNEEDFS 180

Query: 772 SDLSDD 789
           SDL+ D
Sbjct: 181 SDLNSD 186


>ref|XP_002302627.1| predicted protein [Populus trichocarpa] gi|222844353|gb|EEE81900.1|
           predicted protein [Populus trichocarpa]
          Length = 373

 Score =  158 bits (400), Expect = 1e-36
 Identities = 84/187 (44%), Positives = 111/187 (59%), Gaps = 2/187 (1%)
 Frame = +1

Query: 235 MDFLKLFFSLSLVCHLTFAANDCPFSMCGNYVLPIRFPFRLASHQPQNCGYPGFDLHCNS 414
           M  L++ F + L+ H   AA DC  S C    +P+RFPFR+   QP+NCGYPGFDL CN+
Sbjct: 1   MCILEVLFLIKLL-HFINAAADCSISTCSIGDVPVRFPFRIEGQQPRNCGYPGFDLSCNN 59

Query: 415 KDLTVLNLP-SGDFILRSINYRAQVVELYDPYKCLPKRLMELSLTGSPFKAAYYQNYTFL 591
           +  TVL LP SGDF++R INY  Q ++LYD   CL KRL++L+L+GSPF   ++QNYTFL
Sbjct: 60  QSSTVLKLPHSGDFLVRDINYLTQQIQLYDSDNCLAKRLLQLNLSGSPFLGFFHQNYTFL 119

Query: 592 SCPPESTTSRFXXXXXXXXXXXXXXXXXXXXXAISL-TRCKITETLPIPVSRPDQLGGDF 768
           SCP +   SRF                        + + C +  TL IPVS P +    F
Sbjct: 120 SCPTQLVKSRFTTINCLSNSTISVLATSSLNLVNEMSSSCDVISTLKIPVSWPVKYNEGF 179

Query: 769 TSDLSDD 789
           TSDLS++
Sbjct: 180 TSDLSEN 186


>ref|XP_002523355.1| RING-H2 finger protein ATL3K, putative [Ricinus communis]
           gi|223537443|gb|EEF39071.1| RING-H2 finger protein
           ATL3K, putative [Ricinus communis]
          Length = 374

 Score =  154 bits (389), Expect = 2e-35
 Identities = 87/188 (46%), Positives = 112/188 (59%), Gaps = 3/188 (1%)
 Frame = +1

Query: 235 MDFLKLFFSLSLVCHLTFAANDCPFSMCGNYVLPIRFPFRLASHQPQN-CGYPGFDLHCN 411
           M  L++FF L L+  + +A+  C  S C N  +P+RFPFRL   Q Q  CGYPGF+L CN
Sbjct: 1   MGNLEIFFLLFLL-PIIYASEHCAVSKCSNDKVPVRFPFRLEGLQSQQQCGYPGFNLSCN 59

Query: 412 SKDLTVLNLP-SGDFILRSINYRAQVVELYDPYKCLPKRLMELSLTGSPFKAAYYQNYTF 588
           ++  TVL LP SGDF++R INY  Q ++LYDP  C+PKRL+  +L+GSPF AA +QNYTF
Sbjct: 60  NQRKTVLKLPYSGDFLVRGINYLTQQIQLYDPDNCIPKRLLSFNLSGSPFLAAAHQNYTF 119

Query: 589 LSCPPESTTSRFXXXXXXXXXXXXXXXXXXXXXAISL-TRCKITETLPIPVSRPDQLGGD 765
           LSCP +   SRF                     A SL T C +  TL IP S P Q    
Sbjct: 120 LSCPSQLVESRFTTINCLSNSTTSVLATASKSIADSLATSCGVIITLSIPFSWPVQYDEG 179

Query: 766 FTSDLSDD 789
           F+++L DD
Sbjct: 180 FSNELMDD 187


>gb|AFK44003.1| unknown [Medicago truncatula]
          Length = 371

 Score =  144 bits (363), Expect = 2e-32
 Identities = 75/186 (40%), Positives = 107/186 (57%), Gaps = 1/186 (0%)
 Frame = +1

Query: 235 MDFLKLFFSLSLVCHLTFAANDCPFSMCGNYVLPIRFPFRLASHQPQNCGYPGFDLHCNS 414
           MD LK+ F L  +  + +A NDCPFS+CGN    IRFPF+L    P  C YPGF+L C +
Sbjct: 1   MDILKVLFYL--IFPVVYALNDCPFSLCGNNSFLIRFPFQLGEQYPY-CVYPGFNLSCTN 57

Query: 415 KDLTVLNLP-SGDFILRSINYRAQVVELYDPYKCLPKRLMELSLTGSPFKAAYYQNYTFL 591
              T+L LP S +F +RSINY  Q ++LYDP  CLPKRL+ L+ + SPF A++ ++YTFL
Sbjct: 58  DSKTILKLPYSEEFYVRSINYLTQQIQLYDPDDCLPKRLLRLNFSNSPFIASFSRDYTFL 117

Query: 592 SCPPESTTSRFXXXXXXXXXXXXXXXXXXXXXAISLTRCKITETLPIPVSRPDQLGGDFT 771
            C  ++  S+F                       SL+ C + + L +P++RP++   +  
Sbjct: 118 GCSSQNIGSQFIPIDCLSNSTYFVSAIRSVSFVNSLSGCSVIKNLSVPIARPERFQENLR 177

Query: 772 SDLSDD 789
            DLS D
Sbjct: 178 DDLSAD 183


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