BLASTX nr result

ID: Cnidium21_contig00035355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035355
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265698.1| PREDICTED: inactive beta-amylase 4, chloropl...   212   3e-53
ref|NP_568829.2| inactive beta-amylase 4 [Arabidopsis thaliana] ...   184   6e-45
ref|XP_002864407.1| beta-amylase 6 [Arabidopsis lyrata subsp. ly...   184   6e-45
dbj|BAH20280.1| AT5G55700 [Arabidopsis thaliana]                      184   6e-45
gb|AAK76508.1| putative beta-amylase [Arabidopsis thaliana] gi|2...   182   2e-44

>ref|XP_002265698.1| PREDICTED: inactive beta-amylase 4, chloroplastic [Vitis vinifera]
           gi|296089917|emb|CBI39736.3| unnamed protein product
           [Vitis vinifera]
          Length = 522

 Score =  212 bits (539), Expect = 3e-53
 Identities = 115/172 (66%), Positives = 128/172 (74%), Gaps = 5/172 (2%)
 Frame = +2

Query: 2   KSRIIKKKKNIYASSCSFSSTIPLFVKG----WRSVPPPPTNCIFSMDVREKSRSTLSEC 169
           +SRI K  +N+        S IPLF       WRS+     NCIFSMD REKSRST  E 
Sbjct: 27  RSRIRKNLRNV--------SMIPLFKHNGLFIWRSIAA--NNCIFSMDAREKSRSTTLET 76

Query: 170 SKHKRVPIYVMMPVDSFGIDTLGVPRIRKIKALTISLKALKLAGVHGIAVEVWWGVVEGT 349
             HKRVPI+VMMPVDSFGIDT G PRIR+IKALTISLKALKLAGVHGIAVEVWWG+VE  
Sbjct: 77  PGHKRVPIFVMMPVDSFGIDTSGAPRIRRIKALTISLKALKLAGVHGIAVEVWWGIVERF 136

Query: 350 SPLAYNWSLYEDLFNLIADVGLKLQVALSFHSNLHSSQPGQ-GVSLPQWIME 502
           SP  YNWSLYE+LF LI++ GLKL VALSFHSN+HSS   + GVSLP WI+E
Sbjct: 137 SPFVYNWSLYEELFKLISESGLKLHVALSFHSNMHSSSRVKGGVSLPLWIVE 188


>ref|NP_568829.2| inactive beta-amylase 4 [Arabidopsis thaliana]
           gi|75334054|sp|Q9FM68.1|BAM4_ARATH RecName:
           Full=Inactive beta-amylase 4, chloroplastic; AltName:
           Full=Inactive beta-amylase 6; Flags: Precursor
           gi|9758604|dbj|BAB09237.1| beta-amylase [Arabidopsis
           thaliana] gi|332009286|gb|AED96669.1| inactive
           beta-amylase 4 [Arabidopsis thaliana]
          Length = 531

 Score =  184 bits (467), Expect = 6e-45
 Identities = 97/167 (58%), Positives = 120/167 (71%), Gaps = 5/167 (2%)
 Frame = +2

Query: 17  KKKKNIYASSCSFSSTIPLFVKG-----WRSVPPPPTNCIFSMDVREKSRSTLSECSKHK 181
           K+ +N + S     S IP F +G      RSV     + IFSMD REKSRS +   S+HK
Sbjct: 37  KRNRNFFRSV----SMIPPFKRGRFITKLRSVAG--NSRIFSMDAREKSRSFVLVSSRHK 90

Query: 182 RVPIYVMMPVDSFGIDTLGVPRIRKIKALTISLKALKLAGVHGIAVEVWWGVVEGTSPLA 361
           RVP++VMMP+D+FGID  G P+I+++KALT+SLKALKLAGVHGIAVEVWWG+VE  SPL 
Sbjct: 91  RVPVFVMMPIDTFGIDASGCPKIKRLKALTVSLKALKLAGVHGIAVEVWWGIVERFSPLE 150

Query: 362 YNWSLYEDLFNLIADVGLKLQVALSFHSNLHSSQPGQGVSLPQWIME 502
           + WSLYE+LF LI++ GLKL VAL FHSN+H      G+SLP WI E
Sbjct: 151 FKWSLYEELFRLISEAGLKLHVALCFHSNMHLFGGKGGISLPLWIRE 197


>ref|XP_002864407.1| beta-amylase 6 [Arabidopsis lyrata subsp. lyrata]
           gi|297310242|gb|EFH40666.1| beta-amylase 6 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 531

 Score =  184 bits (467), Expect = 6e-45
 Identities = 95/163 (58%), Positives = 117/163 (71%), Gaps = 1/163 (0%)
 Frame = +2

Query: 17  KKKKNIYAS-SCSFSSTIPLFVKGWRSVPPPPTNCIFSMDVREKSRSTLSECSKHKRVPI 193
           K+ +N + S S    S    F+  WRSV     + IFSMD REKSRS +   S+HKRVP+
Sbjct: 37  KRNRNFFRSVSMIPPSKRGRFITKWRSVAG--NSRIFSMDAREKSRSFVLVSSRHKRVPV 94

Query: 194 YVMMPVDSFGIDTLGVPRIRKIKALTISLKALKLAGVHGIAVEVWWGVVEGTSPLAYNWS 373
           +VMMP D+FGID  G P+I+++KALT+SLKALKLAGVHGIAVEVWWG+VE   PL + WS
Sbjct: 95  FVMMPFDTFGIDASGCPKIKRLKALTVSLKALKLAGVHGIAVEVWWGIVERFCPLEFKWS 154

Query: 374 LYEDLFNLIADVGLKLQVALSFHSNLHSSQPGQGVSLPQWIME 502
           LYE+LF LI++ GLKL VAL FHSN+H      G+SLP WI E
Sbjct: 155 LYEELFRLISEAGLKLHVALCFHSNMHLFGGKGGISLPLWIRE 197


>dbj|BAH20280.1| AT5G55700 [Arabidopsis thaliana]
          Length = 498

 Score =  184 bits (467), Expect = 6e-45
 Identities = 97/167 (58%), Positives = 120/167 (71%), Gaps = 5/167 (2%)
 Frame = +2

Query: 17  KKKKNIYASSCSFSSTIPLFVKG-----WRSVPPPPTNCIFSMDVREKSRSTLSECSKHK 181
           K+ +N + S     S IP F +G      RSV     + IFSMD REKSRS +   S+HK
Sbjct: 4   KRNRNFFRSV----SMIPPFKRGRFITKLRSVAG--NSRIFSMDAREKSRSFVLVSSRHK 57

Query: 182 RVPIYVMMPVDSFGIDTLGVPRIRKIKALTISLKALKLAGVHGIAVEVWWGVVEGTSPLA 361
           RVP++VMMP+D+FGID  G P+I+++KALT+SLKALKLAGVHGIAVEVWWG+VE  SPL 
Sbjct: 58  RVPVFVMMPIDTFGIDASGCPKIKRLKALTVSLKALKLAGVHGIAVEVWWGIVERFSPLE 117

Query: 362 YNWSLYEDLFNLIADVGLKLQVALSFHSNLHSSQPGQGVSLPQWIME 502
           + WSLYE+LF LI++ GLKL VAL FHSN+H      G+SLP WI E
Sbjct: 118 FKWSLYEELFRLISEAGLKLHVALCFHSNMHLFGGKGGISLPLWIRE 164


>gb|AAK76508.1| putative beta-amylase [Arabidopsis thaliana]
           gi|25054836|gb|AAN71908.1| putative beta-amylase
           [Arabidopsis thaliana]
          Length = 484

 Score =  182 bits (463), Expect = 2e-44
 Identities = 86/128 (67%), Positives = 104/128 (81%)
 Frame = +2

Query: 119 IFSMDVREKSRSTLSECSKHKRVPIYVMMPVDSFGIDTLGVPRIRKIKALTISLKALKLA 298
           IFSMD REKSRS +   S+HKRVP++VMMP+D+FGID  G P+I+++KALT+SLKALKLA
Sbjct: 23  IFSMDAREKSRSFVLVSSRHKRVPVFVMMPIDTFGIDASGCPKIKRLKALTVSLKALKLA 82

Query: 299 GVHGIAVEVWWGVVEGTSPLAYNWSLYEDLFNLIADVGLKLQVALSFHSNLHSSQPGQGV 478
           GVHGIAVEVWWG+VE  SPL + WSLYE+LF LI++ GLKL VAL FHSN+H      G+
Sbjct: 83  GVHGIAVEVWWGIVERFSPLEFKWSLYEELFRLISEAGLKLHVALCFHSNMHLFGGKGGI 142

Query: 479 SLPQWIME 502
           SLP WI E
Sbjct: 143 SLPLWIRE 150


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