BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035348
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI94078.1| chloroplast ribulose-1,5-bisphosphate carboxylase...   160   8e-38
gb|ABI94077.1| chloroplast ribulose-1,5-bisphosphate carboxylase...   160   8e-38
ref|XP_003632187.1| PREDICTED: ribulose bisphosphate carboxylase...   160   1e-37
ref|XP_002282236.1| PREDICTED: ribulose bisphosphate carboxylase...   160   1e-37
sp|Q40281.1|RCA_MALDO RecName: Full=Ribulose bisphosphate carbox...   159   2e-37

>gb|ABI94078.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase large protein isoform [Acer rubrum]
          Length = 474

 Score =  160 bits (406), Expect = 8e-38
 Identities = 78/111 (70%), Positives = 94/111 (84%)
 Frame = +2

Query: 59  MATAVSTVGTVNRAPLNLNGSGVGAALVPSSSFMGSSLKKVKSRYTSPKVSAGSFKIVAG 238
           MA AVSTVGTVN APL+LNGSG   + VP+S+F G+SLKKV SR+ +PKV +GSFK+VA 
Sbjct: 1   MAAAVSTVGTVNSAPLSLNGSGAAGSTVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVA- 59

Query: 239 DVDEKKQTDKDRWKGLVTDISDDQQDITRGKGMVDSLFQAPSGAGTHDAIM 391
           ++DE KQT+KD+W+GL  D SDDQQDITRGKG+VDSLFQAPSG GTH A+M
Sbjct: 60  EIDENKQTEKDKWRGLAYDTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVM 110


>gb|ABI94077.1| chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase small protein isoform [Acer rubrum]
          Length = 437

 Score =  160 bits (406), Expect = 8e-38
 Identities = 78/111 (70%), Positives = 94/111 (84%)
 Frame = +2

Query: 59  MATAVSTVGTVNRAPLNLNGSGVGAALVPSSSFMGSSLKKVKSRYTSPKVSAGSFKIVAG 238
           MA AVSTVGTVN APL+LNGSG   + VP+S+F G+SLKKV SR+ +PKV +GSFK+VA 
Sbjct: 1   MAAAVSTVGTVNSAPLSLNGSGAAGSTVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVA- 59

Query: 239 DVDEKKQTDKDRWKGLVTDISDDQQDITRGKGMVDSLFQAPSGAGTHDAIM 391
           ++DE KQT+KD+W+GL  D SDDQQDITRGKG+VDSLFQAPSG GTH A+M
Sbjct: 60  EIDENKQTEKDKWRGLAYDTSDDQQDITRGKGLVDSLFQAPSGTGTHYAVM 110


>ref|XP_003632187.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 2,
           chloroplastic isoform 2 [Vitis vinifera]
          Length = 440

 Score =  160 bits (405), Expect = 1e-37
 Identities = 79/111 (71%), Positives = 95/111 (85%)
 Frame = +2

Query: 59  MATAVSTVGTVNRAPLNLNGSGVGAALVPSSSFMGSSLKKVKSRYTSPKVSAGSFKIVAG 238
           MAT VST+G VNR PL+LN SG GA+ VPSS+F GSSLKKV SR+T PK+++GSFK+VA 
Sbjct: 1   MATTVSTIGAVNRTPLSLNSSGTGAS-VPSSAFFGSSLKKVSSRFTHPKIASGSFKVVA- 58

Query: 239 DVDEKKQTDKDRWKGLVTDISDDQQDITRGKGMVDSLFQAPSGAGTHDAIM 391
           ++DE +QT+KDRWKGL  D+SDDQQDITRGKGMVDSLFQAP  +GTH A+M
Sbjct: 59  EIDENEQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVM 109


>ref|XP_002282236.1| PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 2,
           chloroplastic isoform 1 [Vitis vinifera]
           gi|297746032|emb|CBI16088.3| unnamed protein product
           [Vitis vinifera]
          Length = 472

 Score =  160 bits (405), Expect = 1e-37
 Identities = 79/111 (71%), Positives = 95/111 (85%)
 Frame = +2

Query: 59  MATAVSTVGTVNRAPLNLNGSGVGAALVPSSSFMGSSLKKVKSRYTSPKVSAGSFKIVAG 238
           MAT VST+G VNR PL+LN SG GA+ VPSS+F GSSLKKV SR+T PK+++GSFK+VA 
Sbjct: 1   MATTVSTIGAVNRTPLSLNSSGTGAS-VPSSAFFGSSLKKVSSRFTHPKIASGSFKVVA- 58

Query: 239 DVDEKKQTDKDRWKGLVTDISDDQQDITRGKGMVDSLFQAPSGAGTHDAIM 391
           ++DE +QT+KDRWKGL  D+SDDQQDITRGKGMVDSLFQAP  +GTH A+M
Sbjct: 59  EIDENEQTEKDRWKGLAYDVSDDQQDITRGKGMVDSLFQAPMQSGTHYAVM 109


>sp|Q40281.1|RCA_MALDO RecName: Full=Ribulose bisphosphate carboxylase/oxygenase activase,
           chloroplastic; Short=RA; Short=RuBisCO activase; Flags:
           Precursor gi|415852|emb|CAA79857.1|
           ribulose-1,5-bisphosphate carboxylase/oxygenase activase
           [Malus x domestica]
          Length = 437

 Score =  159 bits (402), Expect = 2e-37
 Identities = 84/111 (75%), Positives = 94/111 (84%)
 Frame = +2

Query: 59  MATAVSTVGTVNRAPLNLNGSGVGAALVPSSSFMGSSLKKVKSRYTSPKVSAGSFKIVAG 238
           MATAVST+G+VNRAP NLNGS   A+ VPSS+F+GSSLKKV SR+T+ KVS+GS +IVA 
Sbjct: 1   MATAVSTIGSVNRAPPNLNGSSSSAS-VPSSTFLGSSLKKVNSRFTNSKVSSGSLRIVAS 59

Query: 239 DVDEKKQTDKDRWKGLVTDISDDQQDITRGKGMVDSLFQAPSGAGTHDAIM 391
            VDE KQTDKDRWKGL  D SDDQQDITRGKG VDSLFQAP G+GTH AIM
Sbjct: 60  -VDEDKQTDKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIM 109