BLASTX nr result

ID: Cnidium21_contig00035310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035310
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307567.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
gb|ABF81465.1| TIR-NBS-LRR type disease resistance protein [Popu...   109   3e-22
ref|XP_002264004.2| PREDICTED: TMV resistance protein N-like [Vi...   107   8e-22
ref|XP_002300861.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
ref|XP_002329461.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21

>ref|XP_002307567.1| predicted protein [Populus trichocarpa] gi|222857016|gb|EEE94563.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score =  116 bits (290), Expect = 2e-24
 Identities = 60/116 (51%), Positives = 80/116 (68%)
 Frame = +3

Query: 3   LKTLTISHNYGLTTTPDFTMSPYLENLNFEFCSSLIEVHISVGSLKRLVSLNLHNCKNLK 182
           LK L +SH++ LT TP+F   P LE L  + C SL+EVH S+G L RL+ LN  NCK+LK
Sbjct: 70  LKFLNLSHSHELTKTPNFEGLPCLEKLILKDCVSLVEVHDSIGILGRLLLLNFKNCKSLK 129

Query: 183 SLPDSICNLRALKSLNIGGCSSLEALPIELGNIQSLTEVNAWGLSVWEIPESIGRL 350
           +LP SIC L +LK LN+ GC  LE LP +LG+++SL  + A G ++  IPE+IG L
Sbjct: 130 TLPGSICALSSLKKLNVSGCLKLEGLPEDLGSLKSLVVLLADGTAISTIPETIGNL 185


>gb|ABF81465.1| TIR-NBS-LRR type disease resistance protein [Populus trichocarpa]
          Length = 1139

 Score =  109 bits (272), Expect = 3e-22
 Identities = 56/116 (48%), Positives = 79/116 (68%)
 Frame = +3

Query: 3    LKTLTISHNYGLTTTPDFTMSPYLENLNFEFCSSLIEVHISVGSLKRLVSLNLHNCKNLK 182
            LK L +S++  L+T P F   P LE +  E C+SL+EVH S+G L  L  LNL  CK+LK
Sbjct: 712  LKILNLSYSVHLSTPPHFMGLPCLERIILEGCTSLVEVHQSIGHLDSLTLLNLEGCKSLK 771

Query: 183  SLPDSICNLRALKSLNIGGCSSLEALPIELGNIQSLTEVNAWGLSVWEIPESIGRL 350
            +LP+SIC L+ L+SLNI  C +LE LP +LG++++LT + A G ++  +P SIG L
Sbjct: 772  NLPESICYLKCLESLNISRCINLEKLPDQLGDMEALTMLLADGTAIERLPSSIGHL 827


>ref|XP_002264004.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1092

 Score =  107 bits (268), Expect = 8e-22
 Identities = 51/116 (43%), Positives = 76/116 (65%)
 Frame = +3

Query: 3   LKTLTISHNYGLTTTPDFTMSPYLENLNFEFCSSLIEVHISVGSLKRLVSLNLHNCKNLK 182
           LK + +SH+  LT TPDF+ +P L  +    C+SL+++H S+G+LK L+ LNL  C  L+
Sbjct: 623 LKFIKLSHSQHLTKTPDFSAAPKLRRIILNGCTSLVKLHPSIGALKELIFLNLEGCSKLE 682

Query: 183 SLPDSICNLRALKSLNIGGCSSLEALPIELGNIQSLTEVNAWGLSVWEIPESIGRL 350
           +LP SIC L +L++L + GCS L+ LP +LG +Q L E+N  G  + E+  SI  L
Sbjct: 683 NLPQSICELISLQTLTLSGCSKLKKLPDDLGRLQCLVELNVDGTGIKEVTSSINLL 738


>ref|XP_002300861.1| predicted protein [Populus trichocarpa] gi|222842587|gb|EEE80134.1|
           predicted protein [Populus trichocarpa]
          Length = 647

 Score =  105 bits (262), Expect = 4e-21
 Identities = 56/116 (48%), Positives = 76/116 (65%)
 Frame = +3

Query: 3   LKTLTISHNYGLTTTPDFTMSPYLENLNFEFCSSLIEVHISVGSLKRLVSLNLHNCKNLK 182
           LK L +SH++ L  TP+F   P LE L  + C SL++VH S+G L  L  LNL +C +LK
Sbjct: 95  LKFLYLSHSHKLIETPNFEGFPSLEKLKLKDCISLVKVHDSIGLLSHLQFLNLQDCVDLK 154

Query: 183 SLPDSICNLRALKSLNIGGCSSLEALPIELGNIQSLTEVNAWGLSVWEIPESIGRL 350
           +LP SIC L +LK LN+ GCS LE LP  LG++QSL  + A   ++  +PE+IG L
Sbjct: 155 NLPGSICALSSLKKLNVSGCSKLEELPEHLGSLQSLVLLLADETAISTLPETIGDL 210


>ref|XP_002329461.1| predicted protein [Populus trichocarpa] gi|222870141|gb|EEF07272.1|
           predicted protein [Populus trichocarpa]
          Length = 537

 Score =  105 bits (261), Expect = 5e-21
 Identities = 51/116 (43%), Positives = 79/116 (68%)
 Frame = +3

Query: 3   LKTLTISHNYGLTTTPDFTMSPYLENLNFEFCSSLIEVHISVGSLKRLVSLNLHNCKNLK 182
           LK L +SH++ L+ TPDF+  P+LE L  + C SL+EVH S+G L RLV +NL +CK L 
Sbjct: 61  LKFLNLSHSHYLSRTPDFSRLPHLEKLKLKDCRSLVEVHHSIGYLDRLVLVNLKDCKQLM 120

Query: 183 SLPDSICNLRALKSLNIGGCSSLEALPIELGNIQSLTEVNAWGLSVWEIPESIGRL 350
            LP S   L++++ L + GCS  + LP +LG+++SLT ++A   ++ ++P +I RL
Sbjct: 121 RLPSSFWKLKSIEILYLSGCSKFDELPEDLGDLESLTVLHADDTAIRQVPSTIVRL 176


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