BLASTX nr result

ID: Cnidium21_contig00035289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035289
         (805 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159650.1| PREDICTED: TMV resistance protein N-like [Cu...    60   7e-07
ref|XP_004136800.1| PREDICTED: TMV resistance protein N-like [Cu...    60   7e-07
ref|XP_002893351.1| predicted protein [Arabidopsis lyrata subsp....    60   7e-07
ref|XP_003628578.1| Leucine-rich repeat-containing protein [Medi...    57   5e-06

>ref|XP_004159650.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 936

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
 Frame = +3

Query: 3   LPPNLKQIYASGCFSLERLPNLSNLKQLEELNLSYCSGLTEIEGLDE-LSSMRRLRLEGG 179
           LPP+L  +YAS C SLER  +LSN+K++  L++S C  L EI GLD+ L S+R + +EG 
Sbjct: 690 LPPHLSSLYASNCTSLERTSDLSNVKKMGSLSMSNCPKLMEIPGLDKLLDSIRVIHMEGC 749

Query: 180 RRIS 191
             +S
Sbjct: 750 SNMS 753


>ref|XP_004136800.1| PREDICTED: TMV resistance protein N-like [Cucumis sativus]
          Length = 996

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 1/64 (1%)
 Frame = +3

Query: 3   LPPNLKQIYASGCFSLERLPNLSNLKQLEELNLSYCSGLTEIEGLDE-LSSMRRLRLEGG 179
           LPP+L  +YAS C SLER  +LSN+K++  L++S C  L EI GLD+ L S+R + +EG 
Sbjct: 750 LPPHLSSLYASNCTSLERTSDLSNVKKMGSLSMSNCPKLMEIPGLDKLLDSIRVIHMEGC 809

Query: 180 RRIS 191
             +S
Sbjct: 810 SNMS 813


>ref|XP_002893351.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297339193|gb|EFH69610.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 1385

 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 30/68 (44%), Positives = 45/68 (66%)
 Frame = +3

Query: 3    LPPNLKQIYASGCFSLERLPNLSNLKQLEELNLSYCSGLTEIEGLDELSSMRRLRLEGGR 182
            LP  L+Q+  + CFSLE + +LSNLK L+ELNL+ C  + +I GL+ L++++RL + G  
Sbjct: 1132 LPWRLEQLILANCFSLESISDLSNLKFLDELNLTNCEKVVDILGLEHLTALKRLYMSGCN 1191

Query: 183  RISLLAYK 206
                LA K
Sbjct: 1192 STCSLAVK 1199


>ref|XP_003628578.1| Leucine-rich repeat-containing protein [Medicago truncatula]
            gi|355522600|gb|AET03054.1| Leucine-rich
            repeat-containing protein [Medicago truncatula]
          Length = 1210

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 30/78 (38%), Positives = 47/78 (60%)
 Frame = +3

Query: 3    LPPNLKQIYASGCFSLERLPNLSNLKQLEELNLSYCSGLTEIEGLDELSSMRRLRLEGGR 182
            LP +L  + A  C++LE + ++SNL+ LEEL L+ C  L +I GL+ L S+RRL L G  
Sbjct: 909  LPSSLIMLNADNCYALETIHDMSNLESLEELKLTNCKKLIDIPGLECLKSLRRLYLSGCN 968

Query: 183  RISLLAYKHLTPHLFQSY 236
              S    K L+  + +++
Sbjct: 969  ACSSKVCKRLSKVVLRNF 986


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