BLASTX nr result
ID: Cnidium21_contig00035286
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00035286 (349 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004935350.1| ATPase subunit 4 (mitochondrion) [Silene vul... 54 3e-14 ref|YP_004842186.1| hypothetical protein BemaM_p142 [Beta macroc... 54 4e-14 ref|YP_003587358.1| ATPase subunit 4 [Cucurbita pepo] gi|2591568... 51 3e-13 gb|AAW30209.1| ATPase subunit 4 [Amborella trichopoda] 64 1e-08 dbj|BAJ22086.1| ATPase subunit 4 [Cycas taitungensis] 42 1e-07 >ref|YP_004935350.1| ATPase subunit 4 (mitochondrion) [Silene vulgaris] gi|344227996|gb|AEM46181.1| ATPase subunit 4 (mitochondrion) [Silene vulgaris] gi|385198360|gb|AFI44256.1| ATPase subunit 4 (mitochondrion) [Silene vulgaris] gi|385198421|gb|AFI44309.1| ATPase subunit 4 (mitochondrion) [Silene vulgaris] gi|385198426|gb|AFI44312.1| ATPase subunit 4 (mitochondrion) [Silene vulgaris] Length = 198 Score = 54.3 bits (129), Expect(2) = 3e-14 Identities = 30/46 (65%), Positives = 32/46 (69%), Gaps = 6/46 (13%) Frame = +2 Query: 101 QQRLLRISLRICGIVLVR------ATLCEKTIQALLCCNFNVKSTT 220 QQRLLRISLRICG V+ A CEKT+QALLC N NVKS T Sbjct: 89 QQRLLRISLRICGTVVESLPMARCAPKCEKTVQALLCRNLNVKSAT 134 Score = 48.5 bits (114), Expect(2) = 3e-14 Identities = 25/39 (64%), Positives = 28/39 (71%) Frame = +3 Query: 231 SNCHMRIQDDLVTGFHFKVSERFPKWMLKASSIVELIRE 347 S+ R+QDDLVTGFHF VSERF +SIVELIRE Sbjct: 140 SSRRTRLQDDLVTGFHFSVSERFVPGSTLKASIVELIRE 178 >ref|YP_004842186.1| hypothetical protein BemaM_p142 [Beta macrocarpa] gi|54606726|dbj|BAD66749.1| 25 kDa membrane protein [Beta vulgaris subsp. vulgaris] gi|345500172|emb|CBX24991.1| hypothetical protein [Beta macrocarpa] Length = 198 Score = 53.9 bits (128), Expect(2) = 4e-14 Identities = 29/46 (63%), Positives = 32/46 (69%), Gaps = 6/46 (13%) Frame = +2 Query: 101 QQRLLRISLRICGIVLVR------ATLCEKTIQALLCCNFNVKSTT 220 QQRLLR+SLRICG V+ A CEKT+QALLC N NVKS T Sbjct: 89 QQRLLRVSLRICGTVVESLPMARCAPKCEKTVQALLCRNLNVKSAT 134 Score = 48.5 bits (114), Expect(2) = 4e-14 Identities = 25/39 (64%), Positives = 28/39 (71%) Frame = +3 Query: 231 SNCHMRIQDDLVTGFHFKVSERFPKWMLKASSIVELIRE 347 S+ R+QDDLVTGFHF VSERF +SIVELIRE Sbjct: 140 SSRRTRLQDDLVTGFHFSVSERFVPGSTLKASIVELIRE 178 >ref|YP_003587358.1| ATPase subunit 4 [Cucurbita pepo] gi|259156802|gb|ACV96663.1| ATPase subunit 4 [Cucurbita pepo] Length = 191 Score = 51.2 bits (121), Expect(2) = 3e-13 Identities = 28/46 (60%), Positives = 31/46 (67%), Gaps = 6/46 (13%) Frame = +2 Query: 101 QQRLLRISLRICGIVLVR------ATLCEKTIQALLCCNFNVKSTT 220 QQRLLRISLRICG V+ A CEKT+QAL+C N NVK T Sbjct: 89 QQRLLRISLRICGTVIESLPMARYAPKCEKTVQALVCRNLNVKLAT 134 Score = 48.5 bits (114), Expect(2) = 3e-13 Identities = 24/35 (68%), Positives = 27/35 (77%) Frame = +3 Query: 243 MRIQDDLVTGFHFKVSERFPKWMLKASSIVELIRE 347 +R+QDDLVTGFHF VSERF +SIVELIRE Sbjct: 144 IRLQDDLVTGFHFSVSERFVPGCTLKASIVELIRE 178 >gb|AAW30209.1| ATPase subunit 4 [Amborella trichopoda] Length = 157 Score = 63.9 bits (154), Expect = 1e-08 Identities = 46/100 (46%), Positives = 53/100 (53%), Gaps = 17/100 (17%) Frame = +2 Query: 101 QQRLLRISLRICGIVLVR------ATLCEKTIQALLCCNFNVKSTTPARLQLSYAYSGRS 262 QQRLLRISL+ICG V+ A CEKT+QALLC N NVKS T + S Sbjct: 66 QQRLLRISLQICGTVVESLPMARCAPKCEKTVQALLCRNLNVKSATRP--------NATS 117 Query: 263 SNRISLQ-----------SE*EISQVDAESIFYSRTHSRG 349 S RI LQ SE + ++ FYSRTHSRG Sbjct: 118 SRRIRLQDDLVTGFHFLVSERFVPGSTLKASFYSRTHSRG 157 >dbj|BAJ22086.1| ATPase subunit 4 [Cycas taitungensis] Length = 207 Score = 41.6 bits (96), Expect(2) = 1e-07 Identities = 26/55 (47%), Positives = 31/55 (56%), Gaps = 9/55 (16%) Frame = +2 Query: 83 FLRKP*QQRLLRISLRICGIVLVRATL---------CEKTIQALLCCNFNVKSTT 220 FL QQ+LLRISLR +V + L CEKT+QA+LC N NVK T Sbjct: 83 FLESNEQQQLLRISLRSITPEIVESLLNEMARCAPKCEKTVQAVLCRNLNVKLAT 137 Score = 38.9 bits (89), Expect(2) = 1e-07 Identities = 20/37 (54%), Positives = 26/37 (70%), Gaps = 2/37 (5%) Frame = +3 Query: 243 MRIQDDLVTGFHFKVSERFPKWM--LKASSIVELIRE 347 +R++DD+VTGFHF VSE+F K + I ELIRE Sbjct: 147 IRLRDDIVTGFHFSVSEKFVPCTTDTKKAFIAELIRE 183