BLASTX nr result

ID: Cnidium21_contig00035265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035265
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552116.1| PREDICTED: rRNA 2'-O-methyltransferase fibri...    67   2e-09
ref|XP_003523175.1| PREDICTED: rRNA 2'-O-methyltransferase fibri...    67   2e-09
ref|XP_002869663.1| hypothetical protein ARALYDRAFT_492264 [Arab...    65   4e-09
ref|XP_003537503.1| PREDICTED: rRNA 2'-O-methyltransferase fibri...    65   6e-09
ref|XP_003528091.1| PREDICTED: rRNA 2'-O-methyltransferase fibri...    65   6e-09

>ref|XP_003552116.1| PREDICTED: rRNA 2'-O-methyltransferase fibrillarin 2-like [Glycine
           max]
          Length = 313

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 7/125 (5%)
 Frame = -1

Query: 356 VYAVTSSH--GQSL-----ERPNVVHIVGDLNEPDKYTMNVGEVDVILSEVPQFNQGDVM 198
           VYAV  SH  G+ L     +R NV+ I+ D   P KY M VG VDVI S+V Q +Q  ++
Sbjct: 176 VYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARIL 235

Query: 197 GVNADQFMKAGTNFVASIKTKYLMKKAISISNMEAISYELQILLCNNFVRPTGVDLKEDH 18
           G+NA  ++KAG +FV SIK   +     + +  E+   +L+      F + T    + DH
Sbjct: 236 GLNASYYLKAGGHFVISIKANCIDSTVPAEAVFESEVNKLKADQFKPFEQVTLEPFERDH 295

Query: 17  VYFIG 3
              +G
Sbjct: 296 ACVVG 300


>ref|XP_003523175.1| PREDICTED: rRNA 2'-O-methyltransferase fibrillarin 2-like [Glycine
           max]
          Length = 306

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 7/125 (5%)
 Frame = -1

Query: 356 VYAVTSSH--GQSL-----ERPNVVHIVGDLNEPDKYTMNVGEVDVILSEVPQFNQGDVM 198
           VYAV  SH  G+ L     +R NV+ I+ D   P KY M VG VDVI S+V Q +Q  ++
Sbjct: 169 VYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARIL 228

Query: 197 GVNADQFMKAGTNFVASIKTKYLMKKAISISNMEAISYELQILLCNNFVRPTGVDLKEDH 18
           G+NA  ++KAG +FV SIK   +     + +  E+   +L+      F + T    + DH
Sbjct: 229 GLNASYYLKAGGHFVISIKANCIDSTVPAEAVFESEVNKLKADQFKPFEQVTLEPFERDH 288

Query: 17  VYFIG 3
              +G
Sbjct: 289 ACVVG 293


>ref|XP_002869663.1| hypothetical protein ARALYDRAFT_492264 [Arabidopsis lyrata subsp.
           lyrata] gi|297315499|gb|EFH45922.1| hypothetical protein
           ARALYDRAFT_492264 [Arabidopsis lyrata subsp. lyrata]
          Length = 317

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 7/79 (8%)
 Frame = -1

Query: 356 VYAVTSSH--GQSL-----ERPNVVHIVGDLNEPDKYTMNVGEVDVILSEVPQFNQGDVM 198
           VYAV  SH  G+ L     +R NV+ I+ D   P KY M VG VDVI S+V Q +Q  ++
Sbjct: 179 VYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPSKYRMLVGMVDVIFSDVAQPDQARIL 238

Query: 197 GVNADQFMKAGTNFVASIK 141
           G+NA  F+K+G +FV SIK
Sbjct: 239 GLNASYFLKSGGHFVISIK 257


>ref|XP_003537503.1| PREDICTED: rRNA 2'-O-methyltransferase fibrillarin 2-like [Glycine
           max]
          Length = 315

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 7/125 (5%)
 Frame = -1

Query: 356 VYAVTSSH--GQSL-----ERPNVVHIVGDLNEPDKYTMNVGEVDVILSEVPQFNQGDVM 198
           VYAV  SH  G+ L     +R NV+ I+ D   P KY M VG VDVI S+V Q +Q  ++
Sbjct: 178 VYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARIL 237

Query: 197 GVNADQFMKAGTNFVASIKTKYLMKKAISISNMEAISYELQILLCNNFVRPTGVDLKEDH 18
           G+NA  ++K G +FV SIK   +     + +  E+   +L+      F + T    + DH
Sbjct: 238 GLNASYYLKTGGHFVISIKANCIDSTVPAEAVFESEVNKLKADQFKPFEQVTLEPFERDH 297

Query: 17  VYFIG 3
              +G
Sbjct: 298 ACVVG 302


>ref|XP_003528091.1| PREDICTED: rRNA 2'-O-methyltransferase fibrillarin 2-like [Glycine
           max]
          Length = 305

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 44/125 (35%), Positives = 65/125 (52%), Gaps = 7/125 (5%)
 Frame = -1

Query: 356 VYAVTSSH--GQSL-----ERPNVVHIVGDLNEPDKYTMNVGEVDVILSEVPQFNQGDVM 198
           VYAV  SH  G+ L     +R NV+ I+ D   P KY M VG VDVI S+V Q +Q  ++
Sbjct: 168 VYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARIL 227

Query: 197 GVNADQFMKAGTNFVASIKTKYLMKKAISISNMEAISYELQILLCNNFVRPTGVDLKEDH 18
           G+NA  ++K G +FV SIK   +     + +  E+   +L+      F + T    + DH
Sbjct: 228 GLNASYYLKTGGHFVISIKANCIDSTVPAEAVFESEVNKLKADQFKPFEQVTLEPFERDH 287

Query: 17  VYFIG 3
              +G
Sbjct: 288 ACVVG 292


Top