BLASTX nr result

ID: Cnidium21_contig00035264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035264
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272799.1| PREDICTED: pentatricopeptide repeat-containi...   203   1e-50
emb|CBI24637.3| unnamed protein product [Vitis vinifera]              203   1e-50
emb|CAN65295.1| hypothetical protein VITISV_017782 [Vitis vinifera]   192   2e-47
ref|XP_002309772.1| predicted protein [Populus trichocarpa] gi|2...   170   1e-40
ref|XP_002530303.1| ATP binding protein, putative [Ricinus commu...   160   1e-37

>ref|XP_002272799.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g46870-like [Vitis vinifera]
          Length = 237

 Score =  203 bits (516), Expect = 1e-50
 Identities = 100/136 (73%), Positives = 116/136 (85%)
 Frame = -3

Query: 409 VFEFLREEVWYKPDVSLFSDMILMLGKKKLISEAEELFSELKKEGLVADTRAYTELIGAY 230
           VFEF+R+EVWYKPD+SL+SDMI++LGKKKLI  AE LFSELKKEGL  DTR YTE+IGAY
Sbjct: 100 VFEFIRKEVWYKPDLSLYSDMIMILGKKKLIEMAEGLFSELKKEGLEPDTRVYTEMIGAY 159

Query: 229 VQVDMLEKAMETYEFMKASGCVPDKLTLIILIRNLESAGKGELAAQVKKECYKYLDSPKK 50
           +QV M EKAME Y  MKASGC PDKLTL ILIRNLE+AG+ ELAA VKKEC +Y+D PKK
Sbjct: 160 LQVGMTEKAMEMYGLMKASGCAPDKLTLTILIRNLENAGEEELAAGVKKECEEYVDYPKK 219

Query: 49  FLKEAERTFPKRRPLN 2
           FL+E E+ +PKRR +N
Sbjct: 220 FLEEIEKKYPKRRSVN 235


>emb|CBI24637.3| unnamed protein product [Vitis vinifera]
          Length = 242

 Score =  203 bits (516), Expect = 1e-50
 Identities = 100/136 (73%), Positives = 116/136 (85%)
 Frame = -3

Query: 409 VFEFLREEVWYKPDVSLFSDMILMLGKKKLISEAEELFSELKKEGLVADTRAYTELIGAY 230
           VFEF+R+EVWYKPD+SL+SDMI++LGKKKLI  AE LFSELKKEGL  DTR YTE+IGAY
Sbjct: 105 VFEFIRKEVWYKPDLSLYSDMIMILGKKKLIEMAEGLFSELKKEGLEPDTRVYTEMIGAY 164

Query: 229 VQVDMLEKAMETYEFMKASGCVPDKLTLIILIRNLESAGKGELAAQVKKECYKYLDSPKK 50
           +QV M EKAME Y  MKASGC PDKLTL ILIRNLE+AG+ ELAA VKKEC +Y+D PKK
Sbjct: 165 LQVGMTEKAMEMYGLMKASGCAPDKLTLTILIRNLENAGEEELAAGVKKECEEYVDYPKK 224

Query: 49  FLKEAERTFPKRRPLN 2
           FL+E E+ +PKRR +N
Sbjct: 225 FLEEIEKKYPKRRSVN 240


>emb|CAN65295.1| hypothetical protein VITISV_017782 [Vitis vinifera]
          Length = 303

 Score =  192 bits (488), Expect = 2e-47
 Identities = 95/129 (73%), Positives = 110/129 (85%)
 Frame = -3

Query: 409 VFEFLREEVWYKPDVSLFSDMILMLGKKKLISEAEELFSELKKEGLVADTRAYTELIGAY 230
           VFEF+R+EVWYKPD+SL+SDMI++LGKKKLI  AE LFSELKKEGL  DTR YTE+IGAY
Sbjct: 100 VFEFIRKEVWYKPDLSLYSDMIMILGKKKLIEMAEGLFSELKKEGLEPDTRVYTEMIGAY 159

Query: 229 VQVDMLEKAMETYEFMKASGCVPDKLTLIILIRNLESAGKGELAAQVKKECYKYLDSPKK 50
           +QV M EKAME Y  MKASGC PDKLTL ILIRNLE+AG+ ELAA VKKEC +Y+D PKK
Sbjct: 160 LQVGMTEKAMEMYGLMKASGCAPDKLTLTILIRNLENAGEEELAAGVKKECEEYVDYPKK 219

Query: 49  FLKEAERTF 23
           FL+E E+ +
Sbjct: 220 FLEEIEKKY 228


>ref|XP_002309772.1| predicted protein [Populus trichocarpa] gi|222852675|gb|EEE90222.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  170 bits (431), Expect = 1e-40
 Identities = 84/128 (65%), Positives = 103/128 (80%), Gaps = 1/128 (0%)
 Frame = -3

Query: 409 VFEFLREEVWYKPDVSLFSDMILMLGKKKLISEAEELFSELKKE-GLVADTRAYTELIGA 233
           VFEF+R+EVWYKPD+ L+  MI M+G+ K++  AEE F +L+KE GL  DTRA+TE+IGA
Sbjct: 102 VFEFVRKEVWYKPDILLYHAMIQMVGRNKMVEMAEEFFGKLEKEEGLKPDTRAFTEMIGA 161

Query: 232 YVQVDMLEKAMETYEFMKASGCVPDKLTLIILIRNLESAGKGELAAQVKKECYKYLDSPK 53
           Y+QV M++KAMETYE MKASGC PDKLT  ILIRNLE AGK EL  ++KKEC  Y+D PK
Sbjct: 162 YLQVGMIDKAMETYERMKASGCDPDKLTFRILIRNLEDAGKEELVDRIKKECGDYMDYPK 221

Query: 52  KFLKEAER 29
           KFL+E ER
Sbjct: 222 KFLEEVER 229


>ref|XP_002530303.1| ATP binding protein, putative [Ricinus communis]
           gi|223530159|gb|EEF32070.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 244

 Score =  160 bits (404), Expect = 1e-37
 Identities = 77/127 (60%), Positives = 98/127 (77%)
 Frame = -3

Query: 409 VFEFLREEVWYKPDVSLFSDMILMLGKKKLISEAEELFSELKKEGLVADTRAYTELIGAY 230
           VFEF+++E+WYKPD++L+  MI MLGK K+   AE  FS+L+KEGL  DTRA+ E+IGAY
Sbjct: 104 VFEFVQKEIWYKPDLTLYYGMIEMLGKNKMTEMAEGYFSKLEKEGLKPDTRAFNEMIGAY 163

Query: 229 VQVDMLEKAMETYEFMKASGCVPDKLTLIILIRNLESAGKGELAAQVKKECYKYLDSPKK 50
           ++V   EKAME Y  MK SGCVPDKLT +ILIRNLE AG+ +L   +KKEC  Y+D P+K
Sbjct: 164 LKVGTTEKAMEMYGRMKESGCVPDKLTFVILIRNLEEAGRNDLVDIIKKECGDYMDYPEK 223

Query: 49  FLKEAER 29
           FL+E ER
Sbjct: 224 FLEEVER 230


Top