BLASTX nr result

ID: Cnidium21_contig00035255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035255
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32011.3| unnamed protein product [Vitis vinifera]               95   7e-18
ref|XP_002270296.1| PREDICTED: uncharacterized protein LOC100258...    95   7e-18
ref|XP_003530687.1| PREDICTED: uncharacterized protein LOC100800...    90   2e-16
ref|XP_002314720.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002871929.1| zinc knuckle (CCHC-type) family protein [Ara...    84   9e-15

>emb|CBI32011.3| unnamed protein product [Vitis vinifera]
          Length = 377

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 47/87 (54%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
 Frame = -1

Query: 420 LCGEKGHNRRTCPVSISNEPGNKIIRNHRCKICGLSGHNRRTCQQ-NGLEKVIPSPIKVT 244
           LCGEKGHNRRTC  S  +   + + R+H C+ICG SGHNRRTC Q  GL+       + +
Sbjct: 290 LCGEKGHNRRTCRRSRESGTRSTVSRHHHCRICGHSGHNRRTCPQGTGLKLDAGGTNRGS 349

Query: 243 NTIAKRTCTCRLCLKKGHNIRTCLSKN 163
                R   CRLCL+KGHNIRTC SKN
Sbjct: 350 LISGSRIYACRLCLEKGHNIRTCPSKN 376


>ref|XP_002270296.1| PREDICTED: uncharacterized protein LOC100258796 [Vitis vinifera]
          Length = 387

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 47/87 (54%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
 Frame = -1

Query: 420 LCGEKGHNRRTCPVSISNEPGNKIIRNHRCKICGLSGHNRRTCQQ-NGLEKVIPSPIKVT 244
           LCGEKGHNRRTC  S  +   + + R+H C+ICG SGHNRRTC Q  GL+       + +
Sbjct: 300 LCGEKGHNRRTCRRSRESGTRSTVSRHHHCRICGHSGHNRRTCPQGTGLKLDAGGTNRGS 359

Query: 243 NTIAKRTCTCRLCLKKGHNIRTCLSKN 163
                R   CRLCL+KGHNIRTC SKN
Sbjct: 360 LISGSRIYACRLCLEKGHNIRTCPSKN 386


>ref|XP_003530687.1| PREDICTED: uncharacterized protein LOC100800156 [Glycine max]
          Length = 405

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 48/94 (51%), Positives = 61/94 (64%), Gaps = 3/94 (3%)
 Frame = -1

Query: 420 LCGEKGHNRRTC---PVSISNEPGNKIIRNHRCKICGLSGHNRRTCQQNGLEKVIPSPIK 250
           LCG KGHNRRTC    +S+SN    + I++H+CKIC   GHNRRTC Q  +   +PS  K
Sbjct: 315 LCGGKGHNRRTCRKLKISLSN---GRTIKHHQCKICHQFGHNRRTCPQ-AVPFAVPS--K 368

Query: 249 VTNTIAKRTCTCRLCLKKGHNIRTCLSKNVLPLN 148
             N  ++R   CRLC K+GHNIRTC S+ V+  N
Sbjct: 369 RRNAASRRPYKCRLCKKEGHNIRTCPSRTVVTEN 402


>ref|XP_002314720.1| predicted protein [Populus trichocarpa] gi|222863760|gb|EEF00891.1|
           predicted protein [Populus trichocarpa]
          Length = 259

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 42/86 (48%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
 Frame = -1

Query: 420 LCGEKGHNRRTCPVSISNEPGNKIIRNHRCKICGLSGHNRRTCQQ-NGLEKVIPSPIKVT 244
           LCG+KGHNRRTCP S  +    K+  +HRC+IC   GHNRR+C Q  G++       K  
Sbjct: 174 LCGKKGHNRRTCPKSRMSNHKGKVTWHHRCRICRQGGHNRRSCPQVVGIKFGGSDTFKGF 233

Query: 243 NTIAKRTCTCRLCLKKGHNIRTCLSK 166
                R  TCRLC +KGHN RTC S+
Sbjct: 234 MVSGSRKYTCRLCREKGHNARTCPSR 259


>ref|XP_002871929.1| zinc knuckle (CCHC-type) family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297317766|gb|EFH48188.1| zinc knuckle
           (CCHC-type) family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 404

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
 Frame = -1

Query: 417 CGEKGHNRRTCPVSISNEPGNKIIRNHRCKICGLSGHNRRTC-QQNGLEKVIPSPIKVTN 241
           CG KGHNRRTCP S S        R+H+C ICG SGHN RTC +  G+    P      +
Sbjct: 306 CGGKGHNRRTCPKSKSMVTKGISTRHHQCGICGESGHNSRTCLKPTGVRPSGPGGDSSGD 365

Query: 240 TIAKRTCTCRLCLKKGHNIRTCLSKNV 160
            + +R   CR C K GHN+RTC SK V
Sbjct: 366 GVGRRRYACRFCNKMGHNVRTCPSKQV 392



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/82 (42%), Positives = 42/82 (51%)
 Frame = -1

Query: 417 CGEKGHNRRTCPVSISNEPGNKIIRNHRCKICGLSGHNRRTCQQNGLEKVIPSPIKVTNT 238
           CG++GH R  CP     E G    R  RC+ CG  GHNRRTC +        S   VT  
Sbjct: 280 CGQEGHRRHYCP-----ELGTNADRRFRCRGCGGKGHNRRTCPK--------SKSMVTKG 326

Query: 237 IAKRTCTCRLCLKKGHNIRTCL 172
           I+ R   C +C + GHN RTCL
Sbjct: 327 ISTRHHQCGICGESGHNSRTCL 348


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