BLASTX nr result
ID: Cnidium21_contig00035235
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00035235 (604 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu... 218 6e-55 ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|2... 206 3e-51 emb|CBI28414.3| unnamed protein product [Vitis vinifera] 196 2e-48 ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containin... 196 2e-48 ref|XP_002276183.1| PREDICTED: zinc finger CCCH domain-containin... 150 2e-34 >ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis] gi|223525472|gb|EEF28048.1| RNA binding protein, putative [Ricinus communis] Length = 578 Score = 218 bits (555), Expect = 6e-55 Identities = 114/186 (61%), Positives = 135/186 (72%) Frame = -3 Query: 602 FVYPESVKQILAKGNPHFVCGARVLVKPYREKSRLSERKFSEKVQHPMYYGSHIVDAESD 423 F++ E+VKQILAKGNPH+VCGARVLVKPYREKSRL +RKFSEK+QHPMY SH +D +S+ Sbjct: 397 FIFVETVKQILAKGNPHYVCGARVLVKPYREKSRLIDRKFSEKLQHPMYNSSHFIDGDSE 456 Query: 422 IHSIPRFYDKLGILRKHVMEEHERQLEFERMRFSEMQLAAKSMNHHPYFGYAPSGMKLSE 243 +H +P D +LRK +MEE+E LEFER R E L KS+NH Y G + +KLSE Sbjct: 457 LHPMPTISDNSRLLRKQLMEENEHALEFERRRLLEFHLGPKSLNHQSYLGCSMDELKLSE 516 Query: 242 AHEEQPDFPSAERFNYLLDVLNNGSGXXXXXXXXXXXKYNDQESSQGLNLPDSPFASPMT 63 H E FPSAERFNYLLDVLNNGS YNDQ+ SQG+NLP+SPFASP+ Sbjct: 517 EHAE---FPSAERFNYLLDVLNNGSS-SEGKFRRISTNYNDQD-SQGINLPESPFASPIR 571 Query: 62 SRGIST 45 S GIST Sbjct: 572 S-GIST 576 >ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|222861286|gb|EEE98828.1| predicted protein [Populus trichocarpa] Length = 554 Score = 206 bits (523), Expect = 3e-51 Identities = 104/186 (55%), Positives = 132/186 (70%) Frame = -3 Query: 602 FVYPESVKQILAKGNPHFVCGARVLVKPYREKSRLSERKFSEKVQHPMYYGSHIVDAESD 423 FV+ E+VKQIL+KGNPH VCGARVLVKPYREKSRL +RK++EK+QHP +Y H +D +S+ Sbjct: 371 FVFAETVKQILSKGNPHHVCGARVLVKPYREKSRLVDRKYAEKIQHPFFYSQHFIDGDSE 430 Query: 422 IHSIPRFYDKLGILRKHVMEEHERQLEFERMRFSEMQLAAKSMNHHPYFGYAPSGMKLSE 243 +HS+PR D +LRK +MEEHE+ LE ER R SE QLA K + H Y G++ KLSE Sbjct: 431 LHSVPRVCDNSRLLRKQLMEEHEQALELERRRLSEFQLAPKPLARHAYHGHSMDEFKLSE 490 Query: 242 AHEEQPDFPSAERFNYLLDVLNNGSGXXXXXXXXXXXKYNDQESSQGLNLPDSPFASPMT 63 E+ FPSAE FNY DVLNNGS ++Q+S+QG+NLP+SPFAS + Sbjct: 491 --EQADQFPSAEHFNYWFDVLNNGS-TSEEKHRHTRTNCSEQDSNQGVNLPESPFASAI- 546 Query: 62 SRGIST 45 +GIST Sbjct: 547 GKGIST 552 >emb|CBI28414.3| unnamed protein product [Vitis vinifera] Length = 525 Score = 196 bits (499), Expect = 2e-48 Identities = 110/193 (56%), Positives = 132/193 (68%), Gaps = 5/193 (2%) Frame = -3 Query: 602 FVYPESVKQILAKGNPHFVCGARVLVKPYREK--SRLSERKFSEKVQHPMYYGSHIVDAE 429 FV+ E+VKQIL KGNPH++CGARVLVKPYREK SR +R+ QHPMYY H +D + Sbjct: 346 FVFAETVKQILTKGNPHYICGARVLVKPYREKASSRTVDRR-----QHPMYYSPHFIDED 400 Query: 428 SDIHSIPRFYDKLGILRK-HVMEEHERQLEFERMRFSEMQLAAKSMNHHPYFGYAPSGMK 252 S++ SIPR D +LRK +MEEHE+ LE ER R SE+QL K+ HPYFGY+ K Sbjct: 401 SELQSIPRVCDNSRLLRKQQLMEEHEQALELERRRLSELQLTPKTA--HPYFGYSMDEFK 458 Query: 251 --LSEAHEEQPDFPSAERFNYLLDVLNNGSGXXXXXXXXXXXKYNDQESSQGLNLPDSPF 78 AH EQ +FPSAER NYLL+VLNNGS YN+QESSQGLNLP+SPF Sbjct: 459 QHSDAAHAEQAEFPSAERLNYLLEVLNNGS-----TSEDRSTNYNEQESSQGLNLPESPF 513 Query: 77 ASPMTSRGISTAT 39 ASP+ + IST T Sbjct: 514 ASPIRN-SISTVT 525 >ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like [Vitis vinifera] Length = 572 Score = 196 bits (499), Expect = 2e-48 Identities = 110/193 (56%), Positives = 132/193 (68%), Gaps = 5/193 (2%) Frame = -3 Query: 602 FVYPESVKQILAKGNPHFVCGARVLVKPYREK--SRLSERKFSEKVQHPMYYGSHIVDAE 429 FV+ E+VKQIL KGNPH++CGARVLVKPYREK SR +R+ QHPMYY H +D + Sbjct: 393 FVFAETVKQILTKGNPHYICGARVLVKPYREKASSRTVDRR-----QHPMYYSPHFIDED 447 Query: 428 SDIHSIPRFYDKLGILRK-HVMEEHERQLEFERMRFSEMQLAAKSMNHHPYFGYAPSGMK 252 S++ SIPR D +LRK +MEEHE+ LE ER R SE+QL K+ HPYFGY+ K Sbjct: 448 SELQSIPRVCDNSRLLRKQQLMEEHEQALELERRRLSELQLTPKTA--HPYFGYSMDEFK 505 Query: 251 --LSEAHEEQPDFPSAERFNYLLDVLNNGSGXXXXXXXXXXXKYNDQESSQGLNLPDSPF 78 AH EQ +FPSAER NYLL+VLNNGS YN+QESSQGLNLP+SPF Sbjct: 506 QHSDAAHAEQAEFPSAERLNYLLEVLNNGS-----TSEDRSTNYNEQESSQGLNLPESPF 560 Query: 77 ASPMTSRGISTAT 39 ASP+ + IST T Sbjct: 561 ASPIRN-SISTVT 572 >ref|XP_002276183.1| PREDICTED: zinc finger CCCH domain-containing protein 18 [Vitis vinifera] gi|297737542|emb|CBI26743.3| unnamed protein product [Vitis vinifera] Length = 544 Score = 150 bits (379), Expect = 2e-34 Identities = 84/184 (45%), Positives = 110/184 (59%), Gaps = 2/184 (1%) Frame = -3 Query: 590 ESVKQILAKGNPHFVCGARVLVKPYREKSRLSERKFSEKVQHPMYYGSHIVDAESDIHSI 411 ++VK ILAKG+PH+VCGARVLVKPYREK R +RK+ EK + MYY D +S++H + Sbjct: 363 DTVKSILAKGSPHYVCGARVLVKPYREKPRTGDRKYLEKFESSMYYPLQYADMDSELHMM 422 Query: 410 PRFYDKLGILRKHVMEEHE--RQLEFERMRFSEMQLAAKSMNHHPYFGYAPSGMKLSEAH 237 PR + +LRK +MEE E + LEFE R S++QLA + + + GY+ +K+ EAH Sbjct: 423 PRGMETSRLLRKQIMEEQEFAQDLEFETRRLSKLQLARNPLANQLHHGYSLDELKVLEAH 482 Query: 236 EEQPDFPSAERFNYLLDVLNNGSGXXXXXXXXXXXKYNDQESSQGLNLPDSPFASPMTSR 57 FP+ NY LDV NNGS + S GL LPDSPFA P+ S Sbjct: 483 ANHSKFPTVVHSNYPLDVSNNGSTSDDKPWRAVNNPID--HKSSGLELPDSPFAFPIGS- 539 Query: 56 GIST 45 IST Sbjct: 540 SIST 543