BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035235
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu...   218   6e-55
ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|2...   206   3e-51
emb|CBI28414.3| unnamed protein product [Vitis vinifera]              196   2e-48
ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containin...   196   2e-48
ref|XP_002276183.1| PREDICTED: zinc finger CCCH domain-containin...   150   2e-34

>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
           gi|223525472|gb|EEF28048.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 578

 Score =  218 bits (555), Expect = 6e-55
 Identities = 114/186 (61%), Positives = 135/186 (72%)
 Frame = -3

Query: 602 FVYPESVKQILAKGNPHFVCGARVLVKPYREKSRLSERKFSEKVQHPMYYGSHIVDAESD 423
           F++ E+VKQILAKGNPH+VCGARVLVKPYREKSRL +RKFSEK+QHPMY  SH +D +S+
Sbjct: 397 FIFVETVKQILAKGNPHYVCGARVLVKPYREKSRLIDRKFSEKLQHPMYNSSHFIDGDSE 456

Query: 422 IHSIPRFYDKLGILRKHVMEEHERQLEFERMRFSEMQLAAKSMNHHPYFGYAPSGMKLSE 243
           +H +P   D   +LRK +MEE+E  LEFER R  E  L  KS+NH  Y G +   +KLSE
Sbjct: 457 LHPMPTISDNSRLLRKQLMEENEHALEFERRRLLEFHLGPKSLNHQSYLGCSMDELKLSE 516

Query: 242 AHEEQPDFPSAERFNYLLDVLNNGSGXXXXXXXXXXXKYNDQESSQGLNLPDSPFASPMT 63
            H E   FPSAERFNYLLDVLNNGS             YNDQ+ SQG+NLP+SPFASP+ 
Sbjct: 517 EHAE---FPSAERFNYLLDVLNNGSS-SEGKFRRISTNYNDQD-SQGINLPESPFASPIR 571

Query: 62  SRGIST 45
           S GIST
Sbjct: 572 S-GIST 576


>ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|222861286|gb|EEE98828.1|
           predicted protein [Populus trichocarpa]
          Length = 554

 Score =  206 bits (523), Expect = 3e-51
 Identities = 104/186 (55%), Positives = 132/186 (70%)
 Frame = -3

Query: 602 FVYPESVKQILAKGNPHFVCGARVLVKPYREKSRLSERKFSEKVQHPMYYGSHIVDAESD 423
           FV+ E+VKQIL+KGNPH VCGARVLVKPYREKSRL +RK++EK+QHP +Y  H +D +S+
Sbjct: 371 FVFAETVKQILSKGNPHHVCGARVLVKPYREKSRLVDRKYAEKIQHPFFYSQHFIDGDSE 430

Query: 422 IHSIPRFYDKLGILRKHVMEEHERQLEFERMRFSEMQLAAKSMNHHPYFGYAPSGMKLSE 243
           +HS+PR  D   +LRK +MEEHE+ LE ER R SE QLA K +  H Y G++    KLSE
Sbjct: 431 LHSVPRVCDNSRLLRKQLMEEHEQALELERRRLSEFQLAPKPLARHAYHGHSMDEFKLSE 490

Query: 242 AHEEQPDFPSAERFNYLLDVLNNGSGXXXXXXXXXXXKYNDQESSQGLNLPDSPFASPMT 63
             E+   FPSAE FNY  DVLNNGS              ++Q+S+QG+NLP+SPFAS + 
Sbjct: 491 --EQADQFPSAEHFNYWFDVLNNGS-TSEEKHRHTRTNCSEQDSNQGVNLPESPFASAI- 546

Query: 62  SRGIST 45
            +GIST
Sbjct: 547 GKGIST 552


>emb|CBI28414.3| unnamed protein product [Vitis vinifera]
          Length = 525

 Score =  196 bits (499), Expect = 2e-48
 Identities = 110/193 (56%), Positives = 132/193 (68%), Gaps = 5/193 (2%)
 Frame = -3

Query: 602 FVYPESVKQILAKGNPHFVCGARVLVKPYREK--SRLSERKFSEKVQHPMYYGSHIVDAE 429
           FV+ E+VKQIL KGNPH++CGARVLVKPYREK  SR  +R+     QHPMYY  H +D +
Sbjct: 346 FVFAETVKQILTKGNPHYICGARVLVKPYREKASSRTVDRR-----QHPMYYSPHFIDED 400

Query: 428 SDIHSIPRFYDKLGILRK-HVMEEHERQLEFERMRFSEMQLAAKSMNHHPYFGYAPSGMK 252
           S++ SIPR  D   +LRK  +MEEHE+ LE ER R SE+QL  K+   HPYFGY+    K
Sbjct: 401 SELQSIPRVCDNSRLLRKQQLMEEHEQALELERRRLSELQLTPKTA--HPYFGYSMDEFK 458

Query: 251 --LSEAHEEQPDFPSAERFNYLLDVLNNGSGXXXXXXXXXXXKYNDQESSQGLNLPDSPF 78
                AH EQ +FPSAER NYLL+VLNNGS             YN+QESSQGLNLP+SPF
Sbjct: 459 QHSDAAHAEQAEFPSAERLNYLLEVLNNGS-----TSEDRSTNYNEQESSQGLNLPESPF 513

Query: 77  ASPMTSRGISTAT 39
           ASP+ +  IST T
Sbjct: 514 ASPIRN-SISTVT 525


>ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
           [Vitis vinifera]
          Length = 572

 Score =  196 bits (499), Expect = 2e-48
 Identities = 110/193 (56%), Positives = 132/193 (68%), Gaps = 5/193 (2%)
 Frame = -3

Query: 602 FVYPESVKQILAKGNPHFVCGARVLVKPYREK--SRLSERKFSEKVQHPMYYGSHIVDAE 429
           FV+ E+VKQIL KGNPH++CGARVLVKPYREK  SR  +R+     QHPMYY  H +D +
Sbjct: 393 FVFAETVKQILTKGNPHYICGARVLVKPYREKASSRTVDRR-----QHPMYYSPHFIDED 447

Query: 428 SDIHSIPRFYDKLGILRK-HVMEEHERQLEFERMRFSEMQLAAKSMNHHPYFGYAPSGMK 252
           S++ SIPR  D   +LRK  +MEEHE+ LE ER R SE+QL  K+   HPYFGY+    K
Sbjct: 448 SELQSIPRVCDNSRLLRKQQLMEEHEQALELERRRLSELQLTPKTA--HPYFGYSMDEFK 505

Query: 251 --LSEAHEEQPDFPSAERFNYLLDVLNNGSGXXXXXXXXXXXKYNDQESSQGLNLPDSPF 78
                AH EQ +FPSAER NYLL+VLNNGS             YN+QESSQGLNLP+SPF
Sbjct: 506 QHSDAAHAEQAEFPSAERLNYLLEVLNNGS-----TSEDRSTNYNEQESSQGLNLPESPF 560

Query: 77  ASPMTSRGISTAT 39
           ASP+ +  IST T
Sbjct: 561 ASPIRN-SISTVT 572


>ref|XP_002276183.1| PREDICTED: zinc finger CCCH domain-containing protein 18 [Vitis
           vinifera] gi|297737542|emb|CBI26743.3| unnamed protein
           product [Vitis vinifera]
          Length = 544

 Score =  150 bits (379), Expect = 2e-34
 Identities = 84/184 (45%), Positives = 110/184 (59%), Gaps = 2/184 (1%)
 Frame = -3

Query: 590 ESVKQILAKGNPHFVCGARVLVKPYREKSRLSERKFSEKVQHPMYYGSHIVDAESDIHSI 411
           ++VK ILAKG+PH+VCGARVLVKPYREK R  +RK+ EK +  MYY     D +S++H +
Sbjct: 363 DTVKSILAKGSPHYVCGARVLVKPYREKPRTGDRKYLEKFESSMYYPLQYADMDSELHMM 422

Query: 410 PRFYDKLGILRKHVMEEHE--RQLEFERMRFSEMQLAAKSMNHHPYFGYAPSGMKLSEAH 237
           PR  +   +LRK +MEE E  + LEFE  R S++QLA   + +  + GY+   +K+ EAH
Sbjct: 423 PRGMETSRLLRKQIMEEQEFAQDLEFETRRLSKLQLARNPLANQLHHGYSLDELKVLEAH 482

Query: 236 EEQPDFPSAERFNYLLDVLNNGSGXXXXXXXXXXXKYNDQESSQGLNLPDSPFASPMTSR 57
                FP+    NY LDV NNGS              +    S GL LPDSPFA P+ S 
Sbjct: 483 ANHSKFPTVVHSNYPLDVSNNGSTSDDKPWRAVNNPID--HKSSGLELPDSPFAFPIGS- 539

Query: 56  GIST 45
            IST
Sbjct: 540 SIST 543