BLASTX nr result

ID: Cnidium21_contig00035194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035194
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514923.1| DNA binding protein, putative [Ricinus commu...   142   4e-32
ref|XP_002271716.1| PREDICTED: nuclear transcription factor Y su...   141   6e-32
ref|XP_002297836.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
ref|XP_004144200.1| PREDICTED: nuclear transcription factor Y su...   138   4e-31
ref|XP_004158259.1| PREDICTED: LOW QUALITY PROTEIN: nuclear tran...   137   7e-31

>ref|XP_002514923.1| DNA binding protein, putative [Ricinus communis]
           gi|223545974|gb|EEF47477.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 141

 Score =  142 bits (357), Expect = 4e-32
 Identities = 75/123 (60%), Positives = 97/123 (78%), Gaps = 1/123 (0%)
 Frame = -3

Query: 446 EIINPTFPSGRIKRMMKLDKDINKINPEALFLVSCSLDLFIQSLAKRSAQVAIEKKRKTV 267
           E I P FP+GR+K++MKLDKDINK+  +ALFLVS S +LF++ LA++SA+VA E+KRKT+
Sbjct: 9   ETIRPEFPTGRVKKIMKLDKDINKVTSDALFLVSRSTELFLRLLAEKSAEVATEQKRKTI 68

Query: 266 NLDHLRIAVKRHQPTSEFLLDSLSIPSKNSPVVAAATEPSTSR-SAEKALPFGTRRIDHF 90
            LDH+RIAVKRHQPTS+FLLDSL  P+++S  +AA  E + SR  A+K  P GTRRID  
Sbjct: 69  KLDHIRIAVKRHQPTSDFLLDSLPSPTESSDKLAA--EKNRSRLIADKPAPPGTRRIDEI 126

Query: 89  FHK 81
           F K
Sbjct: 127 FAK 129


>ref|XP_002271716.1| PREDICTED: nuclear transcription factor Y subunit gamma [Vitis
           vinifera]
          Length = 140

 Score =  141 bits (355), Expect = 6e-32
 Identities = 71/125 (56%), Positives = 95/125 (76%), Gaps = 3/125 (2%)
 Frame = -3

Query: 446 EIINPTFPSGRIKRMMKLDKDINKINPEALFLVSCSLDLFIQSLAKRSAQVAIEKKRKTV 267
           E I P  P GR+K+++KLD+DINK+N EALFL+SCS +LF++ LA++SA++AI+KKR+TV
Sbjct: 8   EAIMPELPLGRVKKLVKLDRDINKVNSEALFLISCSTELFLRFLAEQSAEIAIQKKRRTV 67

Query: 266 NLDHLRIAVKRHQPTSEFLLDSLSIPSKNS---PVVAAATEPSTSRSAEKALPFGTRRID 96
            L+HLRIA K+H+PT +FLLDSL +PS+ S   P      +P    +AEK LP GTRRID
Sbjct: 68  KLEHLRIAAKKHRPTRDFLLDSLPVPSQPSDRPPADRIRPQP----AAEKPLPAGTRRID 123

Query: 95  HFFHK 81
            FF K
Sbjct: 124 DFFRK 128


>ref|XP_002297836.1| predicted protein [Populus trichocarpa] gi|222845094|gb|EEE82641.1|
           predicted protein [Populus trichocarpa]
          Length = 123

 Score =  140 bits (353), Expect = 1e-31
 Identities = 72/118 (61%), Positives = 90/118 (76%)
 Frame = -3

Query: 434 PTFPSGRIKRMMKLDKDINKINPEALFLVSCSLDLFIQSLAKRSAQVAIEKKRKTVNLDH 255
           P FP+GRIKR+MKLDKD NK+N +ALFLVS S +LF++ LA++SA+VAIEKKRK V LDH
Sbjct: 7   PEFPTGRIKRIMKLDKDTNKVNADALFLVSSSTELFLRFLAEKSAEVAIEKKRKIVKLDH 66

Query: 254 LRIAVKRHQPTSEFLLDSLSIPSKNSPVVAAATEPSTSRSAEKALPFGTRRIDHFFHK 81
           +R AVKRH PTS+FLLDSL +P+++S    A+   S     +K  P GTRRID FF K
Sbjct: 67  IRAAVKRHHPTSDFLLDSLPLPAQSSE-KPASDNTSARTVTDKPAPAGTRRIDQFFAK 123


>ref|XP_004144200.1| PREDICTED: nuclear transcription factor Y subunit C-1-like [Cucumis
           sativus]
          Length = 139

 Score =  138 bits (348), Expect = 4e-31
 Identities = 70/122 (57%), Positives = 91/122 (74%)
 Frame = -3

Query: 446 EIINPTFPSGRIKRMMKLDKDINKINPEALFLVSCSLDLFIQSLAKRSAQVAIEKKRKTV 267
           E I P FP+GR+K++MKLDKDI K+N EALFLVSC+ +LF++ LA++SA+ A EKKRKTV
Sbjct: 8   EAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAESAAEKKRKTV 67

Query: 266 NLDHLRIAVKRHQPTSEFLLDSLSIPSKNSPVVAAATEPSTSRSAEKALPFGTRRIDHFF 87
            L+H+R+AVKRH+  S+FLLDSL +PS+ S    A  E  T    +K  P GTRRID FF
Sbjct: 68  KLEHIRMAVKRHRSISDFLLDSLPLPSQPSD-APAKDENRTRAVVDKVAPEGTRRIDDFF 126

Query: 86  HK 81
            +
Sbjct: 127 RR 128


>ref|XP_004158259.1| PREDICTED: LOW QUALITY PROTEIN: nuclear transcription factor Y
           subunit C-1-like [Cucumis sativus]
          Length = 139

 Score =  137 bits (346), Expect = 7e-31
 Identities = 70/122 (57%), Positives = 90/122 (73%)
 Frame = -3

Query: 446 EIINPTFPSGRIKRMMKLDKDINKINPEALFLVSCSLDLFIQSLAKRSAQVAIEKKRKTV 267
           E I P FP+GR+K++MKLDKDI K+N EALFLVSC+ +LF++ LA +SA+ A EKKRKTV
Sbjct: 8   EAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAXKSAESAAEKKRKTV 67

Query: 266 NLDHLRIAVKRHQPTSEFLLDSLSIPSKNSPVVAAATEPSTSRSAEKALPFGTRRIDHFF 87
            L+H+R+AVKRH+  S+FLLDSL +PS+ S    A  E  T    +K  P GTRRID FF
Sbjct: 68  KLEHIRMAVKRHRSISDFLLDSLPLPSQPSD-APAKDENRTRAVVDKVAPEGTRRIDDFF 126

Query: 86  HK 81
            +
Sbjct: 127 RR 128


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