BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035187
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containi...   244   7e-63
ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containi...   236   2e-60
ref|XP_002315764.1| predicted protein [Populus trichocarpa] gi|2...   236   2e-60
ref|XP_003610734.1| Pentatricopeptide repeat-containing protein ...   229   2e-58
ref|NP_193218.1| pentatricopeptide repeat-containing protein [Ar...   205   4e-51

>ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
            [Vitis vinifera] gi|297737070|emb|CBI26271.3| unnamed
            protein product [Vitis vinifera]
          Length = 727

 Score =  244 bits (622), Expect = 7e-63
 Identities = 112/156 (71%), Positives = 132/156 (84%)
 Frame = -2

Query: 472  KRWHNVGEVRQLMKHKGISKERGTSRIELNNEVHEFLTADKYHKQSDEIYAKLNEVVTDV 293
            +RW +VG+VR+LMKHKGISKERG SR ELNNE+HEFL AD+ HK +DEIY KL EVV+ +
Sbjct: 572  RRWEDVGQVRKLMKHKGISKERGCSRFELNNEIHEFLVADRSHKHADEIYEKLYEVVSKL 631

Query: 292  KLKGYTPITSNVLTNLDEEEKKEAVLWHSEKLALCYGLLSGKTGTRIHIIKNLRICEDCH 113
            KL GY+P T ++L +L+EEEKKE VLWHSEKLALCYGL+   TG+ I IIKNLR+CEDCH
Sbjct: 632  KLVGYSPNTCSILVDLEEEEKKEVVLWHSEKLALCYGLMRDGTGSCIRIIKNLRVCEDCH 691

Query: 112  TFMKLVSDVYKTEIVVRDRTRFHQYKNGVCSCNDYW 5
            TF+KL S VY+ EIVVRDRTRFH YK+GVCSC DYW
Sbjct: 692  TFIKLASKVYEREIVVRDRTRFHHYKDGVCSCKDYW 727


>ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820-like
            [Glycine max]
          Length = 721

 Score =  236 bits (601), Expect = 2e-60
 Identities = 107/156 (68%), Positives = 130/156 (83%)
 Frame = -2

Query: 472  KRWHNVGEVRQLMKHKGISKERGTSRIELNNEVHEFLTADKYHKQSDEIYAKLNEVVTDV 293
            KRW +VG VR+LMKHKG+SKE+  SRIE+NNEVH F+ AD+YHKQSDEIY KL+ VV+ +
Sbjct: 566  KRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHVFMMADRYHKQSDEIYKKLDAVVSQL 625

Query: 292  KLKGYTPITSNVLTNLDEEEKKEAVLWHSEKLALCYGLLSGKTGTRIHIIKNLRICEDCH 113
            KL GYTP TS +L +L+EEEKKE VLWHSEKLALCYGL+  +  + I I+KNLRICEDCH
Sbjct: 626  KLVGYTPSTSGILVDLEEEEKKEVVLWHSEKLALCYGLIGERKESCIRIVKNLRICEDCH 685

Query: 112  TFMKLVSDVYKTEIVVRDRTRFHQYKNGVCSCNDYW 5
            +FMKLVS V++ EIV+RDRTRFH +  G+CSC DYW
Sbjct: 686  SFMKLVSKVHRIEIVMRDRTRFHHFNGGICSCRDYW 721


>ref|XP_002315764.1| predicted protein [Populus trichocarpa] gi|222864804|gb|EEF01935.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score =  236 bits (601), Expect = 2e-60
 Identities = 109/156 (69%), Positives = 131/156 (83%)
 Frame = -2

Query: 472 KRWHNVGEVRQLMKHKGISKERGTSRIELNNEVHEFLTADKYHKQSDEIYAKLNEVVTDV 293
           +RW +VGE+R LMK +GISKERG SRIELNN+V+EF+ ADK HKQ+D+IY KL+EVV ++
Sbjct: 297 RRWQDVGELRNLMKQRGISKERGCSRIELNNQVYEFVMADKKHKQADKIYEKLDEVVKEL 356

Query: 292 KLKGYTPITSNVLTNLDEEEKKEAVLWHSEKLALCYGLLSGKTGTRIHIIKNLRICEDCH 113
           KL GYTP T +VL +++EE KKE VLWHSEKLALCYGL+    G+ I I+KNLR+CEDCH
Sbjct: 357 KLVGYTPNTRSVLVDVEEEGKKEVVLWHSEKLALCYGLMGEGKGSCIRIVKNLRVCEDCH 416

Query: 112 TFMKLVSDVYKTEIVVRDRTRFHQYKNGVCSCNDYW 5
           TF+KLVS VY  EI+VRDRTRFH YK GVCSCNDYW
Sbjct: 417 TFIKLVSKVYGMEIIVRDRTRFHHYKAGVCSCNDYW 452


>ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355512069|gb|AES93692.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 726

 Score =  229 bits (584), Expect = 2e-58
 Identities = 104/156 (66%), Positives = 130/156 (83%)
 Frame = -2

Query: 472  KRWHNVGEVRQLMKHKGISKERGTSRIELNNEVHEFLTADKYHKQSDEIYAKLNEVVTDV 293
            KRW++VG +R+ M +KGISKE+ +SRIE+NN+VH F+ AD+YHKQSDEIY KL+EVV+ +
Sbjct: 571  KRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADRYHKQSDEIYEKLDEVVSKL 630

Query: 292  KLKGYTPITSNVLTNLDEEEKKEAVLWHSEKLALCYGLLSGKTGTRIHIIKNLRICEDCH 113
            KL GY P TS +L +L+EE+KKE VLWHSEKLA+CYGL+S +  + I I+KNLRICEDCH
Sbjct: 631  KLVGYKPSTSGILIDLEEEDKKELVLWHSEKLAVCYGLISRRNESCIRIVKNLRICEDCH 690

Query: 112  TFMKLVSDVYKTEIVVRDRTRFHQYKNGVCSCNDYW 5
            +FMKLVS VY+ EIVVRDRTRFH    G+CSC DYW
Sbjct: 691  SFMKLVSKVYQIEIVVRDRTRFHHCSGGICSCRDYW 726


>ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75274931|sp|O23337.1|PP311_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At4g14820 gi|2244839|emb|CAB10261.1| hypothetical protein
            [Arabidopsis thaliana] gi|7268228|emb|CAB78524.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|332658106|gb|AEE83506.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 722

 Score =  205 bits (521), Expect = 4e-51
 Identities = 95/162 (58%), Positives = 123/162 (75%), Gaps = 6/162 (3%)
 Frame = -2

Query: 472  KRWHNVGEVRQLMKHKGISKERGTSRIELNNEVHEFLTADKYHKQSDEIYAKLNEVVTDV 293
            +RW +V  +R++M+ K + KE+G SRI+ N + HEFL  DK HKQS+EIYAKL+EVV+ +
Sbjct: 561  QRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKL 620

Query: 292  KLKGYTPITSNVLTNLDEEEKKEAVLWHSEKLALCYGLLSGKTGTR------IHIIKNLR 131
            KL GY P   +VL +++EEEKK+ VLWHSEKLALC+GL++ +          I I+KNLR
Sbjct: 621  KLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLR 680

Query: 130  ICEDCHTFMKLVSDVYKTEIVVRDRTRFHQYKNGVCSCNDYW 5
            +CEDCH F KLVS VY+ EI+VRDRTRFH YKNG+CSC DYW
Sbjct: 681  VCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722