BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035184
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615696.1| Pentatricopeptide repeat-containing protein ...   146   2e-33
ref|NP_173402.2| pentatricopeptide repeat-containing protein [Ar...   131   6e-29
emb|CAA06829.1| DYW7 protein [Arabidopsis thaliana]                   131   6e-29
ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containi...   121   8e-26
ref|XP_002867196.1| pentatricopeptide repeat-containing protein ...   120   2e-25

>ref|XP_003615696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355517031|gb|AES98654.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  146 bits (369), Expect = 2e-33
 Identities = 71/131 (54%), Positives = 82/131 (62%)
 Frame = -1

Query: 544  IGQSWVEVRNTVHCFVTGDKCRPNADALLSWTKGVAGEVNRSDTQNTLCCGEEDDEKVGG 365
            IGQSW+E  N VH FV GD+  P  D L SW K VA  V    + N L   EE+ E    
Sbjct: 757  IGQSWIERNNVVHTFVVGDQSNPYLDKLHSWLKRVAVNVKTHVSDNELYIEEEEKENTSS 816

Query: 364  VHSEKLSTAFSLLSSAQTCQPIRILKSLRMCEDCHTTIKYVSKAYEREIYVCDSNCLHHF 185
            VHSEKL+ AF+L+      Q +RI+K LRMC DCH T KY+S AY  EIY+ DSNCLHHF
Sbjct: 817  VHSEKLAFAFALIDPHNKPQILRIVKKLRMCRDCHDTAKYISMAYGCEIYLSDSNCLHHF 876

Query: 184  IDGSCSCGDYW 152
              G CSC DYW
Sbjct: 877  KGGHCSCRDYW 887


>ref|NP_173402.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75263158|sp|Q9FXH1.1|PPR52_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g19720; AltName: Full=Protein DYW7
            gi|10086495|gb|AAG12555.1|AC007797_15 Unknown Protein
            [Arabidopsis thaliana] gi|332191770|gb|AEE29891.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 894

 Score =  131 bits (330), Expect = 6e-29
 Identities = 67/133 (50%), Positives = 86/133 (64%), Gaps = 2/133 (1%)
 Frame = -1

Query: 544  IGQSWVEVRNTVHCFVTGDKCRPNADALLSWTKGVAGEVNRSDTQN-TLCCGEEDDEKVG 368
            +GQSW+EVRN +H F TGD+ +   D L    + ++   NRSD  N  L   EE  E+  
Sbjct: 762  LGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMSRLDNRSDQYNGELWIEEEGREETC 821

Query: 367  GVHSEKLSTAFSLLSSAQTCQP-IRILKSLRMCEDCHTTIKYVSKAYEREIYVCDSNCLH 191
            G+HSEK + AF L+SS+   +  IRILK+LRMC DCH T KYVSK Y  +I + D+ CLH
Sbjct: 822  GIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLH 881

Query: 190  HFIDGSCSCGDYW 152
            HF +G CSC DYW
Sbjct: 882  HFKNGDCSCKDYW 894


>emb|CAA06829.1| DYW7 protein [Arabidopsis thaliana]
          Length = 406

 Score =  131 bits (330), Expect = 6e-29
 Identities = 67/133 (50%), Positives = 86/133 (64%), Gaps = 2/133 (1%)
 Frame = -1

Query: 544 IGQSWVEVRNTVHCFVTGDKCRPNADALLSWTKGVAGEVNRSDTQN-TLCCGEEDDEKVG 368
           +GQSW+EVRN +H F TGD+ +   D L    + ++   NRSD  N  L   EE  E+  
Sbjct: 274 LGQSWIEVRNLIHTFTTGDQSKLCTDVLYPLVEKMSRLDNRSDQYNGELWIEEEGREETC 333

Query: 367 GVHSEKLSTAFSLLSSAQTCQP-IRILKSLRMCEDCHTTIKYVSKAYEREIYVCDSNCLH 191
           G+HSEK + AF L+SS+   +  IRILK+LRMC DCH T KYVSK Y  +I + D+ CLH
Sbjct: 334 GIHSEKFAMAFGLISSSGASKTTIRILKNLRMCRDCHDTAKYVSKRYGCDILLEDTRCLH 393

Query: 190 HFIDGSCSCGDYW 152
           HF +G CSC DYW
Sbjct: 394 HFKNGDCSCKDYW 406


>ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
            [Vitis vinifera]
          Length = 1545

 Score =  121 bits (303), Expect = 8e-26
 Identities = 57/118 (48%), Positives = 78/118 (66%)
 Frame = -1

Query: 544  IGQSWVEVRNTVHCFVTGDKCRPNADALLSWTKGVAGEVNRSDTQNTLCCGEEDDEKVGG 365
            +G SW+E +N VH FV  D+ RP  D L SW + VA +V   D  + L   EE+ E++GG
Sbjct: 766  LGCSWIEAKNIVHTFVADDRSRPYFDFLHSWIENVARKVKAPDQHDRLFIEEEEKEEIGG 825

Query: 364  VHSEKLSTAFSLLSSAQTCQPIRILKSLRMCEDCHTTIKYVSKAYEREIYVCDSNCLH 191
            VHSEKL+ AF+L+  +   + +RI+K+LRMC DCH T K++S  Y  EIY+ DS CLH
Sbjct: 826  VHSEKLALAFALIDPSCAPRSVRIVKNLRMCGDCHGTAKFLSMLYSCEIYLSDSKCLH 883


>ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297313032|gb|EFH43455.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 997

 Score =  120 bits (300), Expect = 2e-25
 Identities = 59/135 (43%), Positives = 85/135 (62%), Gaps = 5/135 (3%)
 Frame = -1

Query: 541  GQSWVEVRNTVHCFVTGDKCRPNADALLSWTKGVAGEVNRS----DTQNTLCCGEEDD-E 377
            G SW+EV+N +H FV  D+  P  + +    K +  ++ +     +T  TL   EE++ E
Sbjct: 864  GFSWIEVKNKIHLFVVDDRSNPQTELIYKKVKDMIRDIKQEGYVPETDFTLVDVEEEEKE 923

Query: 376  KVGGVHSEKLSTAFSLLSSAQTCQPIRILKSLRMCEDCHTTIKYVSKAYEREIYVCDSNC 197
            +    HSEKL+ AF LLS+  +  PIR++K+LR+C DCH  +KY+SK Y+REI + D+N 
Sbjct: 924  RALYYHSEKLAVAFGLLSTPPST-PIRVIKNLRVCGDCHNAMKYISKVYDREIVLRDANR 982

Query: 196  LHHFIDGSCSCGDYW 152
             H F DG CSCGDYW
Sbjct: 983  FHRFKDGICSCGDYW 997