BLASTX nr result

ID: Cnidium21_contig00035146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035146
         (830 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314220.1| predicted protein [Populus trichocarpa] gi|2...   313   2e-83
ref|XP_002330862.1| predicted protein [Populus trichocarpa] gi|2...   303   2e-80
ref|XP_002531898.1| conserved hypothetical protein [Ricinus comm...   300   2e-79
ref|XP_004146198.1| PREDICTED: F-box/kelch-repeat protein SKIP25...   273   3e-71
ref|XP_003612576.1| F-box/kelch-repeat protein SKIP25 [Medicago ...   264   2e-68

>ref|XP_002314220.1| predicted protein [Populus trichocarpa] gi|222850628|gb|EEE88175.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score =  313 bits (803), Expect = 2e-83
 Identities = 147/283 (51%), Positives = 202/283 (71%), Gaps = 7/283 (2%)
 Frame = +3

Query: 3   VSEKWRS---PPDDPPVRLLVRHPFFISRNLPVQSVSVSGKLVVLAATTENFVPALSSPL 173
           +S +W S   PP DPP+ L++RHP FISR+LP+QS+S S +L++LAAT+ +F PALS PL
Sbjct: 105 ISSRWDSLPPPPPDPPLHLILRHPSFISRDLPIQSISASYRLILLAATSHSFSPALSRPL 164

Query: 174 VFNPLTRNWSSAPPLSAARRWCVAGACGNSVYVASGVGSQYNTEVARSVEKLEFFESKCD 353
           VFNPL+ +W+  PPL+  RRWC AG+   +VYVASG+GSQYNT+VA+S+EK +    K  
Sbjct: 165 VFNPLSGSWAFGPPLATPRRWCAAGSAHGTVYVASGIGSQYNTDVAKSLEKWDLQNQKAM 224

Query: 354 NFDSKN----WKWRKLGLLKNGKFSREAIEAVSYRGKLCMVNVKGDFRKEGLIYDVENDT 521
             + +N    WKW K+  LKNG+FSR+AI+AV +RGKLCMVN+KGD  KEG++YD E DT
Sbjct: 225 ISNIRNKTTTWKWVKVKELKNGRFSRDAIDAVGWRGKLCMVNMKGDAAKEGIVYDTEKDT 284

Query: 522 WQDMPEGMLAGWRGPAASMKEQCLYVVDESKGVLKMYNSDKDCWEDVIECEKLQGAEHMX 701
           W+DMP+GM+AGWRGP A+M E+ +YVVDE+KGVL+ Y+ ++DCWE ++E E+L GA+ + 
Sbjct: 285 WEDMPQGMVAGWRGPVAAMDEEVMYVVDEAKGVLRKYDPERDCWERIMESERLIGAQQIA 344

Query: 702 XXXXXXXXXXXXXXXXXXXXXXAIPSKLFVMETPEGLQAMSIH 830
                                 A+P +L+V+ETP G +A  IH
Sbjct: 345 AGGGRVCVICGGSTELVVLDVVALPVRLWVVETPPGFEAFRIH 387


>ref|XP_002330862.1| predicted protein [Populus trichocarpa] gi|222872684|gb|EEF09815.1|
           predicted protein [Populus trichocarpa]
          Length = 399

 Score =  303 bits (777), Expect = 2e-80
 Identities = 145/283 (51%), Positives = 197/283 (69%), Gaps = 7/283 (2%)
 Frame = +3

Query: 3   VSEKWRS---PPDDPPVRLLVRHPFFISRNLPVQSVSVSGKLVVLAATTENFVPALSSPL 173
           +S KW S   PP DPP+ LL+RHP FISR+LP+QS+S  G+L+++AAT+ NF PALS PL
Sbjct: 107 ISSKWDSLPPPPPDPPLHLLLRHPCFISRDLPIQSISACGRLILIAATSHNFSPALSRPL 166

Query: 174 VFNPLTRNWSSAPPLSAARRWCVAGACGNSVYVASGVGSQYNTEVARSVEKLEFFESKCD 353
           VFNPL+  W   PPL+  RRWC AG+  ++VYVASG+GSQ+NT+V++SVEK +       
Sbjct: 167 VFNPLSGVWGFGPPLTTPRRWCAAGSAKDTVYVASGIGSQFNTDVSKSVEKWDLQSKNVG 226

Query: 354 NFDSKN----WKWRKLGLLKNGKFSREAIEAVSYRGKLCMVNVKGDFRKEGLIYDVENDT 521
                N    WKW K+  LK+G+F R+AI+AV +RGKLCMVN+KGD  KEGL+YD E D 
Sbjct: 227 ISTIANKTITWKWEKVKGLKDGRFCRDAIDAVGWRGKLCMVNMKGDAPKEGLVYDTEKDA 286

Query: 522 WQDMPEGMLAGWRGPAASMKEQCLYVVDESKGVLKMYNSDKDCWEDVIECEKLQGAEHMX 701
           W++MPEGMLAGWRGP ASM E+ ++VVDE++GVL+ Y+ +KD WE ++E E+L GA+ + 
Sbjct: 287 WENMPEGMLAGWRGPVASMDEETMFVVDEARGVLRKYDPEKDYWEHMMESERLVGAQKIA 346

Query: 702 XXXXXXXXXXXXXXXXXXXXXXAIPSKLFVMETPEGLQAMSIH 830
                                 A+P KL+V++TP G +A++IH
Sbjct: 347 AGGGRVCVIRGCSTEIVVLDVAALPVKLWVVKTPPGFEALAIH 389


>ref|XP_002531898.1| conserved hypothetical protein [Ricinus communis]
           gi|223528465|gb|EEF30497.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 399

 Score =  300 bits (769), Expect = 2e-79
 Identities = 143/274 (52%), Positives = 191/274 (69%), Gaps = 5/274 (1%)
 Frame = +3

Query: 24  PPDDPPVRLLVRHPFFISRNLPVQSVSVSGKLVVLAATTENFVPALSSPLVFNPLTRNWS 203
           PP DPP+R ++RHP FISR+LP+QSV+VSG L++LAATT+NF PALS P +FNP++R WS
Sbjct: 110 PPPDPPLRPIIRHPSFISRHLPIQSVTVSGHLILLAATTDNFYPALSRPFIFNPVSRRWS 169

Query: 204 SAPPLSAARRWCVAGACGNS-VYVASGVGSQYNTEVARSVEKLEFFESKCDNFDSKN--- 371
             PPL+  RRWC AGA  NS VYVASG+GSQ++ ++A+SVEK EF   +     S     
Sbjct: 170 FGPPLTTPRRWCAAGAINNSTVYVASGIGSQFSADIAKSVEKWEFLRDEKRTRSSNQSCL 229

Query: 372 WKWRKLGLLKNGKFSREAIEAVSYRGKLCMVNVKGDFRKEGLIYDVENDTWQDMPEGMLA 551
           WKW K+  LK+G+FSR+AI+A+ +RGKLCMVNVKGD  KEGL+YD + D W+DMP GMLA
Sbjct: 230 WKWEKVKGLKDGRFSRDAIDAIGWRGKLCMVNVKGDAAKEGLVYDTKKDLWEDMPIGMLA 289

Query: 552 GWRGPAASMKEQCLYVVDESKGVLKMYNSDKDCWEDVI-ECEKLQGAEHMXXXXXXXXXX 728
           GW+GP A+M E+ +YVVDE KG L+ Y+  KD WE++I E E  +GA+ +          
Sbjct: 290 GWKGPVAAMDEEVMYVVDEVKGALRKYDPSKDVWENIITESENFKGAQQIAAAGGRVCVV 349

Query: 729 XXXXXXXXXXXXXAIPSKLFVMETPEGLQAMSIH 830
                        A P +L+ M+TP G +A+++H
Sbjct: 350 CEGGNGIAVVDVVAAPVRLWTMDTPPGFEAVAVH 383


>ref|XP_004146198.1| PREDICTED: F-box/kelch-repeat protein SKIP25-like [Cucumis sativus]
           gi|449521327|ref|XP_004167681.1| PREDICTED:
           F-box/kelch-repeat protein SKIP25-like [Cucumis sativus]
          Length = 375

 Score =  273 bits (698), Expect = 3e-71
 Identities = 136/280 (48%), Positives = 185/280 (66%), Gaps = 4/280 (1%)
 Frame = +3

Query: 3   VSEKWRS---PPDDPPVRLLVRHPFFISRNLPVQSVSVSGKLVVLAATTENFVPALSSPL 173
           +S KW     PP+ P   LL+ HP F+SR+LPVQS++VSG L++LAATT N +PAL  PL
Sbjct: 92  ISSKWSPLPPPPNSPSSHLLIHHPSFLSRHLPVQSLTVSGHLLLLAATTYNLLPALPRPL 151

Query: 174 VFNPLTRNWSSAPPLSAARRWCVAGACGNSVYVASGVGSQYNTEVARSVEKLEFFESKCD 353
           +F+P + +W  APPL   RRWC AGA   SVYVASG+GS ++T+VARSVE+ +F  +  D
Sbjct: 152 LFSPFSNSWRLAPPLPTPRRWCAAGALHGSVYVASGIGSFFSTDVARSVERWDFKSNGAD 211

Query: 354 NFDSKNWKWRKLGLLKNGKFSREAIEAVSYRGKLCMVNVKGDFRKEGLIYDVENDTWQDM 533
                   W K+  LK+GKFSR+AI+AV ++GKLCMVNVKG   KEGL+YD+E D W++M
Sbjct: 212 G-------WEKVSGLKDGKFSRDAIDAVGWKGKLCMVNVKGHALKEGLVYDLEKDEWEEM 264

Query: 534 PEGMLAGWRGPAASMKEQCLYVVDESKGVLKMYNSDKDCWEDVIECEKLQGAEHMXXXXX 713
           PEGM+ GWRGP A+M E+ +YVVDE  G L+ Y+S+KD WE+V+E  +L+GA  M     
Sbjct: 265 PEGMIEGWRGPVAAMDEKDMYVVDEISGSLRRYDSEKDFWEEVMESNRLKGAVQMAAGGG 324

Query: 714 XXXXXXXXXXXXXXXXXXAI-PSKLFVMETPEGLQAMSIH 830
                                P++L+V  TP G + +++H
Sbjct: 325 RVCVVCGGSRGEIVVVDVVTSPARLWVEPTPPGTEVVAVH 364


>ref|XP_003612576.1| F-box/kelch-repeat protein SKIP25 [Medicago truncatula]
           gi|355513911|gb|AES95534.1| F-box/kelch-repeat protein
           SKIP25 [Medicago truncatula]
          Length = 380

 Score =  264 bits (674), Expect = 2e-68
 Identities = 131/277 (47%), Positives = 181/277 (65%), Gaps = 1/277 (0%)
 Frame = +3

Query: 3   VSEKWRSPPDDPPVR-LLVRHPFFISRNLPVQSVSVSGKLVVLAATTENFVPALSSPLVF 179
           +S  W+  P  PP+  +L+ HP F+SRNL VQS+SVS  L++LAATT N  PALS PL+F
Sbjct: 107 ISNTWKILPPPPPLHHILLHHPSFLSRNLSVQSISVSDNLILLAATTHNLTPALSHPLIF 166

Query: 180 NPLTRNWSSAPPLSAARRWCVAGACGNSVYVASGVGSQYNTEVARSVEKLEFFESKCDNF 359
           NP ++ WS  P L+  RRWC  G     VYVASG+GS ++ +VA+S+EK +         
Sbjct: 167 NP-SQGWSVGPALTNPRRWCALGTSEGMVYVASGIGSHFSVDVAKSIEKWDPINDPI--- 222

Query: 360 DSKNWKWRKLGLLKNGKFSREAIEAVSYRGKLCMVNVKGDFRKEGLIYDVENDTWQDMPE 539
                 W K   +K+G+FSREA++AV +RGKL MVNVKGD  KEG++YDVE DTW++MPE
Sbjct: 223 ------WEKKTDMKDGRFSREAVDAVGWRGKLYMVNVKGDAAKEGVVYDVEEDTWKEMPE 276

Query: 540 GMLAGWRGPAASMKEQCLYVVDESKGVLKMYNSDKDCWEDVIECEKLQGAEHMXXXXXXX 719
           GML G+RGP A+M+E+ +YVVDE+KG+L  YNS+ D WE + E ++L+GAE M       
Sbjct: 277 GMLLGFRGPVAAMEEEVMYVVDEAKGILSRYNSEDDIWEKIFESQRLKGAEQM--VAKQG 334

Query: 720 XXXXXXXXXXXXXXXXAIPSKLFVMETPEGLQAMSIH 830
                           A+P ++ V+E PEG +A+++H
Sbjct: 335 RICVVSTAGISVVDVVAVPPRISVVELPEGFEAVAVH 371


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