BLASTX nr result

ID: Cnidium21_contig00035140 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035140
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20540.3| unnamed protein product [Vitis vinifera]              158   7e-37
ref|XP_002273767.1| PREDICTED: peroxisome biogenesis protein 1-l...   158   7e-37
ref|XP_002517570.1| peroxisome biogenesis factor, putative [Rici...   154   1e-35
ref|XP_003529444.1| PREDICTED: peroxisome biogenesis protein 1-l...   133   2e-29
gb|AAG44817.1| peroxisome biogenesis protein PEX1 [Arabidopsis t...   127   2e-27

>emb|CBI20540.3| unnamed protein product [Vitis vinifera]
          Length = 1114

 Score =  158 bits (400), Expect = 7e-37
 Identities = 89/202 (44%), Positives = 129/202 (63%), Gaps = 3/202 (1%)
 Frame = +2

Query: 5   EADGVKMGVVITSAVFIHPDTAKHHGFNLLQCMVIEPRLAPKDSKTNHQKVKQKIRSSTT 184
           E  GV++GVV+T+ V+IHP+TA+++ F+ LQ +++ PR +P     N   + +K   ST 
Sbjct: 212 EVKGVELGVVLTNVVYIHPETARNYSFDSLQLVILVPR-SPSKGNYNDTDMFRKKSISTA 270

Query: 185 KEINGGVPIDKLDHRQAIVRLLFSESVAKGHIMLSQSLCLYLRASRRSWIYLKRHDISPN 364
           KE + G+  DK +  Q +VRLL SESVAKGH+M++QSL  YLR    SW+Y+KR DI+  
Sbjct: 271 KEFSDGLA-DKKEPCQVVVRLLISESVAKGHVMMAQSLRHYLRTGLHSWVYMKRCDINLK 329

Query: 365 KEISSFSLSPCQFKTLKKD-IFDNNSSEVLVSQKSRQVK--LDKIYSDTEMGVIDWSVHE 535
           KEIS  SLSPCQFK  +K+   + N  EVL S  + + K  L +  SDT M + DWS HE
Sbjct: 330 KEISLLSLSPCQFKMFEKNKALEENGLEVLDSLTNHKTKSMLLETNSDTYMNISDWSTHE 389

Query: 536 KILPAVFNESPDDDNDVTGHKT 601
           +   A+  ESP  +++ T  ++
Sbjct: 390 EFAAALSFESPGSEDEKTSSQS 411


>ref|XP_002273767.1| PREDICTED: peroxisome biogenesis protein 1-like [Vitis vinifera]
          Length = 1134

 Score =  158 bits (400), Expect = 7e-37
 Identities = 89/202 (44%), Positives = 129/202 (63%), Gaps = 3/202 (1%)
 Frame = +2

Query: 5   EADGVKMGVVITSAVFIHPDTAKHHGFNLLQCMVIEPRLAPKDSKTNHQKVKQKIRSSTT 184
           E  GV++GVV+T+ V+IHP+TA+++ F+ LQ +++ PR +P     N   + +K   ST 
Sbjct: 212 EVKGVELGVVLTNVVYIHPETARNYSFDSLQLVILVPR-SPSKGNYNDTDMFRKKSISTA 270

Query: 185 KEINGGVPIDKLDHRQAIVRLLFSESVAKGHIMLSQSLCLYLRASRRSWIYLKRHDISPN 364
           KE + G+  DK +  Q +VRLL SESVAKGH+M++QSL  YLR    SW+Y+KR DI+  
Sbjct: 271 KEFSDGLA-DKKEPCQVVVRLLISESVAKGHVMMAQSLRHYLRTGLHSWVYMKRCDINLK 329

Query: 365 KEISSFSLSPCQFKTLKKD-IFDNNSSEVLVSQKSRQVK--LDKIYSDTEMGVIDWSVHE 535
           KEIS  SLSPCQFK  +K+   + N  EVL S  + + K  L +  SDT M + DWS HE
Sbjct: 330 KEISLLSLSPCQFKMFEKNKALEENGLEVLDSLTNHKTKSMLLETNSDTYMNISDWSTHE 389

Query: 536 KILPAVFNESPDDDNDVTGHKT 601
           +   A+  ESP  +++ T  ++
Sbjct: 390 EFAAALSFESPGSEDEKTSSQS 411


>ref|XP_002517570.1| peroxisome biogenesis factor, putative [Ricinus communis]
           gi|223543202|gb|EEF44734.1| peroxisome biogenesis
           factor, putative [Ricinus communis]
          Length = 1137

 Score =  154 bits (390), Expect = 1e-35
 Identities = 89/200 (44%), Positives = 127/200 (63%), Gaps = 5/200 (2%)
 Frame = +2

Query: 5   EADGVKMGVVITSAVFIHPDTAKHHGFNLLQCMVIEPRLAPKDS-KTNHQKVKQKIRSST 181
           E +GV++GVV+TS  +IHP+TA     + LQ + I PRL+ K++ +T    V +   SS 
Sbjct: 211 EVEGVELGVVLTSVAYIHPETATRFSLDSLQLVTIVPRLSSKETIRTPESDVSRTKNSSA 270

Query: 182 TKEINGGVPIDKLDHRQAIVRLLFSESVAKGHIMLSQSLCLYLRASRRSWIYLKRHDISP 361
            KEI   +  DK ++RQAIVR++FS+SVAKGH+M+++SL LYL AS  SW+YLK   +  
Sbjct: 271 LKEIKNDILTDKKEYRQAIVRIVFSDSVAKGHLMIARSLRLYLMASLHSWVYLKICTMDL 330

Query: 362 NKEISSFSLSPCQFKTLKKD-IFDNNSSEVL---VSQKSRQVKLDKIYSDTEMGVIDWSV 529
            ++I+S SLSPC FK   +D   + NS EVL   + QK R   L    S + MG +DWSV
Sbjct: 331 KEDITSLSLSPCHFKMPGQDNAIEKNSLEVLDQRIIQKPR--NLVSGGSGSYMGTVDWSV 388

Query: 530 HEKILPAVFNESPDDDNDVT 589
           H++IL A+ N+ P +    T
Sbjct: 389 HDRILAALSNDFPCEGGQET 408


>ref|XP_003529444.1| PREDICTED: peroxisome biogenesis protein 1-like [Glycine max]
          Length = 1130

 Score =  133 bits (335), Expect = 2e-29
 Identities = 76/187 (40%), Positives = 112/187 (59%), Gaps = 3/187 (1%)
 Frame = +2

Query: 14  GVKMGVVITSAVFIHPDTAKHHGFNLLQCMVIEPRLAPKDSKTNHQKVKQKIRSSTTKEI 193
           GV++ V +TS  F+HP+TAK + FN+LQ + I PR+  ++   +   + +      T E+
Sbjct: 217 GVELHVGLTSVAFVHPETAKKYSFNMLQLVSIVPRVTKENVNISRSNIMKAKSGPATNEV 276

Query: 194 NGGVPIDKLDHRQAIVRLLFSESVAKGHIMLSQSLCLYLRASRRSWIYLKRHDISPNKEI 373
             G   DK ++RQ IV+LL SESVA+GH+M+++SL LYLRAS  SW+YLK  DI   K I
Sbjct: 277 ENGYT-DKTEYRQTIVQLLISESVAEGHVMVAKSLRLYLRASLHSWVYLKACDIILEKSI 335

Query: 374 SSFSLSPCQFKTLKKD-IFDNNSSEVLVSQKSR--QVKLDKIYSDTEMGVIDWSVHEKIL 544
            S SL PCQFK LK++   + +  EV    K+   +    K  S   +  IDWS+  ++ 
Sbjct: 336 PSTSLFPCQFKLLKQENAVEKDGLEVFHGHKNHIDENLHAKPTSGVFVDTIDWSIQNEVA 395

Query: 545 PAVFNES 565
            A+ +ES
Sbjct: 396 AALSDES 402


>gb|AAG44817.1| peroxisome biogenesis protein PEX1 [Arabidopsis thaliana]
          Length = 1119

 Score =  127 bits (319), Expect = 2e-27
 Identities = 71/196 (36%), Positives = 112/196 (57%), Gaps = 3/196 (1%)
 Frame = +2

Query: 5   EAD--GVKMGVVITSAVFIHPDTAKHHGFNLLQCMVIEPRLAPKDSKTNHQKVKQKIRSS 178
           EAD  G ++ V +TS  +IHP+TAK H    LQ + + PR+  K S    + +  K  S 
Sbjct: 207 EADVKGFELRVALTSIAYIHPETAKKHSLESLQLISVSPRIPLKGSAKKDEALNMK-NSE 265

Query: 179 TTKEINGGVPIDKLDHRQAIVRLLFSESVAKGHIMLSQSLCLYLRASRRSWIYLKRHDIS 358
            +K    G    K + RQAI+RL+FS+  AKGH+M+ +SL LYL A   SW+YL+  +++
Sbjct: 266 ASKVAENGTSSAKKEPRQAILRLVFSDLAAKGHLMMVESLRLYLGAGLHSWVYLRGCNVN 325

Query: 359 PNKEISSFSLSPCQFKTLKKD-IFDNNSSEVLVSQKSRQVKLDKIYSDTEMGVIDWSVHE 535
            +KEI + SLSPC FK  + + + D  +  +  +   R+         T + V+DWSVH+
Sbjct: 326 EDKEIPALSLSPCVFKISENEKVLDKGTDRLGNNNSVRKSSHPPSGLSTYVDVVDWSVHD 385

Query: 536 KILPAVFNESPDDDND 583
           K++ A+ +E   D+ +
Sbjct: 386 KVVTALSSEGLHDEGN 401


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